RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 XPCQ01831 940 aaPredicted RBP12.52□□□□□ -0.41
SNX13-212ENST00000498463 RAD51AP2Q09MP3 1159 aa12.52□□□□□ -0.41
SNX13-212ENST00000498463 C16orf46Q6P387 395 aa12.52□□□□□ -0.41
SNX13-212ENST00000498463 TMC1Q8TDI8 760 aa12.52□□□□□ -0.41
SNX13-212ENST00000498463 SPATA32Q96LK8 384 aa12.52□□□□□ -0.41
SNX13-212ENST00000498463 POTEB3A0JP26 581 aa12.51□□□□□ -0.41
SNX13-212ENST00000498463 PRPF40AO75400 957 aaKnown RBP12.51□□□□□ -0.41
SNX13-212ENST00000498463 EPHA4P54764 986 aa12.51□□□□□ -0.41
SNX13-212ENST00000498463 FGD1P98174 961 aa12.51□□□□□ -0.41
SNX13-212ENST00000498463 POTEBQ6S5H4 581 aa12.51□□□□□ -0.41
SNX13-212ENST00000498463 HS3ST6Q96QI5 342 aa12.51□□□□□ -0.41
SNX13-212ENST00000498463 PRKD2Q9BZL6 878 aa12.51□□□□□ -0.41
SNX13-212ENST00000498463 TSPAN10Q9H1Z9 355 aaPredicted RBP12.51□□□□□ -0.41
SNX13-212ENST00000498463 PARP2Q9UGN5 583 aa12.51□□□□□ -0.41
SNX13-212ENST00000498463 ATAD2Q6PL18 1390 aa12.51□□□□□ -0.41
SNX13-212ENST00000498463 WASLO00401 505 aaPredicted RBP12.5□□□□□ -0.41
SNX13-212ENST00000498463 BACH1O14867 736 aa12.5□□□□□ -0.41
SNX13-212ENST00000498463 FZD6O60353 706 aa12.5□□□□□ -0.41
SNX13-212ENST00000498463 STAU1O95793 577 aaKnown RBP12.5□□□□□ -0.41
SNX13-212ENST00000498463 MAPK8P45983 427 aa12.5□□□□□ -0.41
SNX13-212ENST00000498463 EIF1AXP47813 144 aaKnown RBP12.5□□□□□ -0.41
SNX13-212ENST00000498463 GDF10P55107 478 aa12.5□□□□□ -0.41
SNX13-212ENST00000498463 ERVK-9P63128 1117 aa12.5□□□□□ -0.41
SNX13-212ENST00000498463 INTS6LQ5JSJ4 861 aaKnown RBP12.5□□□□□ -0.41
SNX13-212ENST00000498463 DMRTB1Q96MA1 342 aa12.5□□□□□ -0.41
SNX13-212ENST00000498463 DUSP9Q99956 384 aaKnown RBP12.5□□□□□ -0.41
SNX13-212ENST00000498463 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
SNX13-212ENST00000498463 ERVH48-1M5A8F1 160 aa12.49□□□□□ -0.41
SNX13-212ENST00000498463 SH3BP2P78314 561 aa12.49□□□□□ -0.41
SNX13-212ENST00000498463 EHHADHQ08426 723 aa12.49□□□□□ -0.41
SNX13-212ENST00000498463 METTL16Q86W50 562 aaKnown RBP12.49□□□□□ -0.41
SNX13-212ENST00000498463 NT5DC4Q86YG4 428 aa12.49□□□□□ -0.41
SNX13-212ENST00000498463 CHMP7Q8WUX9 453 aaPredicted RBP12.49□□□□□ -0.41
SNX13-212ENST00000498463 MTRQ99707 1265 aa12.49□□□□□ -0.41
SNX13-212ENST00000498463 ESF1Q9H501 851 aaKnown RBP12.49□□□□□ -0.41
SNX13-212ENST00000498463 CCDC87Q9NVE4 849 aa12.49□□□□□ -0.41
SNX13-212ENST00000498463 FCF1Q9Y324 198 aaKnown RBP12.49□□□□□ -0.41
SNX13-212ENST00000498463 IGHA2P01877 340 aa12.48□□□□□ -0.41
SNX13-212ENST00000498463 PLCB3Q01970 1234 aa12.48□□□□□ -0.41
SNX13-212ENST00000498463 TMC4Q7Z404 712 aa12.48□□□□□ -0.41
SNX13-212ENST00000498463 TMEM87AQ8NBN3 555 aa12.48□□□□□ -0.41
SNX13-212ENST00000498463 CC2D2BQ6DHV5 1058 aa12.47□□□□□ -0.41
SNX13-212ENST00000498463 ALKBH2Q6NS38 261 aa12.47□□□□□ -0.41
SNX13-212ENST00000498463 FAM129BQ96TA1 746 aa12.47□□□□□ -0.41
SNX13-212ENST00000498463 TNFRSF10BO14763 440 aa12.46□□□□□ -0.41
SNX13-212ENST00000498463 GPR182O15218 404 aa12.46□□□□□ -0.41
SNX13-212ENST00000498463 ITGAEP38570 1179 aa12.46□□□□□ -0.41
SNX13-212ENST00000498463 AAMPQ13685 434 aa12.46□□□□□ -0.41
SNX13-212ENST00000498463 ANKRD13DQ6ZTN6 518 aa12.46□□□□□ -0.41
SNX13-212ENST00000498463 OSBPL3Q9H4L5 887 aa12.46□□□□□ -0.41
SNX13-212ENST00000498463 RNF19AQ9NV58 838 aa12.46□□□□□ -0.41
SNX13-212ENST00000498463 SERTAD1Q9UHV2 236 aa12.46□□□□□ -0.41
SNX13-212ENST00000498463 A0A1W2PRU2 124 aa12.45□□□□□ -0.42
SNX13-212ENST00000498463 PPP1R12BO60237 982 aaPredicted RBP12.45□□□□□ -0.42
SNX13-212ENST00000498463 SORBS3O60504 671 aa12.45□□□□□ -0.42
SNX13-212ENST00000498463 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.45□□□□□ -0.42
SNX13-212ENST00000498463 STIM2Q9P246 746 aa12.45□□□□□ -0.42
SNX13-212ENST00000498463 INHAP05111 366 aa12.44□□□□□ -0.42
SNX13-212ENST00000498463 DAB2P98082 770 aa12.44□□□□□ -0.42
SNX13-212ENST00000498463 FANCCQ00597 558 aa12.44□□□□□ -0.42
SNX13-212ENST00000498463 COX20Q5RI15 118 aa12.44□□□□□ -0.42
SNX13-212ENST00000498463 THSD4Q6ZMP0 1018 aa12.44□□□□□ -0.42
SNX13-212ENST00000498463 TINF2Q9BSI4 451 aa12.44□□□□□ -0.42
SNX13-212ENST00000498463 METTL5Q9NRN9 209 aaKnown RBP12.44□□□□□ -0.42
SNX13-212ENST00000498463 VTI1BQ9UEU0 232 aa12.44□□□□□ -0.42
SNX13-212ENST00000498463 MAP4K5Q9Y4K4 846 aa12.44□□□□□ -0.42
SNX13-212ENST00000498463 S1PR4O95977 384 aa12.43□□□□□ -0.42
SNX13-212ENST00000498463 ATP2B2Q01814 1243 aa12.43□□□□□ -0.42
SNX13-212ENST00000498463 PSMD2Q13200 908 aa12.43□□□□□ -0.42
SNX13-212ENST00000498463 PDE3BQ13370 1112 aa12.43□□□□□ -0.42
SNX13-212ENST00000498463 VASH1Q7L8A9 365 aaPredicted RBP12.43□□□□□ -0.42
SNX13-212ENST00000498463 ALKBH8Q96BT7 664 aaKnown RBP12.43□□□□□ -0.42
SNX13-212ENST00000498463 ETNK1Q9HBU6 452 aa12.43□□□□□ -0.42
SNX13-212ENST00000498463 WWC3Q9ULE0 1092 aa12.43□□□□□ -0.42
SNX13-212ENST00000498463 NYAP1Q6ZVC0 841 aa12.42□□□□□ -0.42
SNX13-212ENST00000498463 ZNF516Q92618 1163 aa12.42□□□□□ -0.42
SNX13-212ENST00000498463 TANGO6Q9C0B7 1094 aa12.42□□□□□ -0.42
SNX13-212ENST00000498463 FOXK2Q01167 660 aa12.41□□□□□ -0.42
SNX13-212ENST00000498463 STAG2Q8N3U4 1231 aa12.41□□□□□ -0.42
SNX13-212ENST00000498463 RNF34Q969K3 372 aa12.41□□□□□ -0.42
SNX13-212ENST00000498463 SLC4A9Q96Q91 983 aa12.41□□□□□ -0.42
SNX13-212ENST00000498463 SETDB2Q96T68 719 aa12.41□□□□□ -0.42
SNX13-212ENST00000498463 C2orf49Q9BVC5 232 aaPredicted RBP12.41□□□□□ -0.42
SNX13-212ENST00000498463 TGIF2Q9GZN2 237 aa12.41□□□□□ -0.42
SNX13-212ENST00000498463 CYLDQ9NQC7 956 aa12.41□□□□□ -0.42
SNX13-212ENST00000498463 TBCELQ5QJ74 424 aa12.4□□□□□ -0.42
SNX13-212ENST00000498463 SLC9A9Q8IVB4 645 aa12.4□□□□□ -0.42
SNX13-212ENST00000498463 CCSER2Q9H7U1 834 aa12.4□□□□□ -0.42
SNX13-212ENST00000498463 QTRT2Q9H974 415 aaKnown RBP12.4□□□□□ -0.42
SNX13-212ENST00000498463 IL21Q9HBE4 155 aa12.4□□□□□ -0.42
SNX13-212ENST00000498463 SCHIP1Q9P0W5 487 aaPredicted RBP12.4□□□□□ -0.42
SNX13-212ENST00000498463 TJAP1Q5JTD0 557 aa12.39□□□□□ -0.43
SNX13-212ENST00000498463 DPH6Q7L8W6 267 aa12.39□□□□□ -0.43
SNX13-212ENST00000498463 ABTB2Q8N961 1025 aa12.39□□□□□ -0.43
SNX13-212ENST00000498463 ZNF76P36508 570 aa12.38□□□□□ -0.43
SNX13-212ENST00000498463 ENOX2Q16206 610 aaKnown RBP12.38□□□□□ -0.43
SNX13-212ENST00000498463 VARSP26640 1264 aaKnown RBP12.37□□□□□ -0.43
SNX13-212ENST00000498463 ATCAYQ86WG3 371 aa12.37□□□□□ -0.43
SNX13-212ENST00000498463 TMPRSS4Q9NRS4 437 aa12.37□□□□□ -0.43
SNX13-212ENST00000498463 LRFN2Q9ULH4 789 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms