RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 MTHFSP49914 203 aa10.19□□□□□ -0.78
CDC42-205ENST00000498236 WDR43Q15061 677 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDC42-205ENST00000498236 TSR1Q2NL82 804 aaKnown RBP10.19□□□□□ -0.78
CDC42-205ENST00000498236 CFAP53Q96M91 514 aa10.19□□□□□ -0.78
CDC42-205ENST00000498236 C19orf44Q9H6X5 657 aa10.19□□□□□ -0.78
CDC42-205ENST00000498236 OVOS2A0A0J9YW53 1432 aa10.18□□□□□ -0.78
CDC42-205ENST00000498236 OVOS2Q6IE36 1432 aa10.18□□□□□ -0.78
CDC42-205ENST00000498236 PPP4R3BQ5MIZ7 849 aa10.18□□□□□ -0.78
CDC42-205ENST00000498236 PROSER2Q86WR7 435 aaPredicted RBP10.18□□□□□ -0.78
CDC42-205ENST00000498236 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.18□□□□□ -0.78
CDC42-205ENST00000498236 ZNF454Q8N9F8 522 aa10.18□□□□□ -0.78
CDC42-205ENST00000498236 ADAMTS8Q9UP79 889 aa10.18□□□□□ -0.78
CDC42-205ENST00000498236 COL3A1P02461 1466 aaPredicted RBP10.17□□□□□ -0.78
CDC42-205ENST00000498236 USP31Q70CQ4 1352 aa10.17□□□□□ -0.78
CDC42-205ENST00000498236 STRCP1A6NGW2 1772 aa10.17□□□□□ -0.78
CDC42-205ENST00000498236 RGPD8O14715 1765 aaPredicted RBP10.17□□□□□ -0.78
CDC42-205ENST00000498236 NME9Q86XW9 330 aa10.17□□□□□ -0.78
CDC42-205ENST00000498236 NGEFQ8N5V2 710 aa10.17□□□□□ -0.78
CDC42-205ENST00000498236 NGDNQ8NEJ9 315 aaKnown RBP10.17□□□□□ -0.78
CDC42-205ENST00000498236 IL27Q8NEV9 243 aa10.17□□□□□ -0.78
CDC42-205ENST00000498236 ZDHHC16Q969W1 377 aa10.17□□□□□ -0.78
CDC42-205ENST00000498236 COG3Q96JB2 828 aa10.17□□□□□ -0.78
CDC42-205ENST00000498236 SHPRHQ149N8 1683 aa10.17□□□□□ -0.78
CDC42-205ENST00000498236 LRRC7Q96NW7 1537 aa10.17□□□□□ -0.78
CDC42-205ENST00000498236 TMEM94Q12767 1356 aa10.16□□□□□ -0.78
CDC42-205ENST00000498236 USP54Q70EL1 1684 aa10.16□□□□□ -0.78
CDC42-205ENST00000498236 HRO43593 1189 aa10.16□□□□□ -0.78
CDC42-205ENST00000498236 TNNT2P45379 298 aaPredicted RBP10.16□□□□□ -0.78
CDC42-205ENST00000498236 CERKQ8TCT0 537 aa10.16□□□□□ -0.78
CDC42-205ENST00000498236 PSEN2P49810 448 aa10.15□□□□□ -0.78
CDC42-205ENST00000498236 PDE3BQ13370 1112 aa10.15□□□□□ -0.78
CDC42-205ENST00000498236 C6orf132Q5T0Z8 1188 aa10.15□□□□□ -0.78
CDC42-205ENST00000498236 C14orf37Q86TY3 774 aa10.15□□□□□ -0.78
CDC42-205ENST00000498236 PARP9Q8IXQ6 854 aa10.15□□□□□ -0.78
CDC42-205ENST00000498236 PMFBP1Q8TBY8 1022 aa10.15□□□□□ -0.78
CDC42-205ENST00000498236 POLKQ9UBT6 870 aa10.15□□□□□ -0.78
CDC42-205ENST00000498236 CDK12Q9NYV4 1490 aaPredicted RBP10.15□□□□□ -0.78
CDC42-205ENST00000498236 DMRTA1Q5VZB9 504 aa10.14□□□□□ -0.79
CDC42-205ENST00000498236 C1orf167Q5SNV9 1468 aa10.14□□□□□ -0.79
CDC42-205ENST00000498236 KIF1AQ12756 1690 aa10.14□□□□□ -0.79
CDC42-205ENST00000498236 TTLL12Q14166 644 aaPredicted RBP10.13□□□□□ -0.79
CDC42-205ENST00000498236 NUDCQ9Y266 331 aa10.13□□□□□ -0.79
CDC42-205ENST00000498236 MST1RQ04912 1400 aa10.13□□□□□ -0.79
CDC42-205ENST00000498236 PIK3C2AO00443 1686 aa10.12□□□□□ -0.79
CDC42-205ENST00000498236 ATF3P18847 181 aa10.12□□□□□ -0.79
CDC42-205ENST00000498236 ESCO1Q5FWF5 840 aa10.12□□□□□ -0.79
CDC42-205ENST00000498236 FAM117AQ9C073 453 aa10.12□□□□□ -0.79
CDC42-205ENST00000498236 MSH6P52701 1360 aa10.12□□□□□ -0.79
CDC42-205ENST00000498236 KIF24Q5T7B8 1368 aa10.12□□□□□ -0.79
CDC42-205ENST00000498236 DIAPH1O60610 1272 aaKnown RBP10.11□□□□□ -0.79
CDC42-205ENST00000498236 RUNDC1Q96C34 613 aa10.11□□□□□ -0.79
CDC42-205ENST00000498236 DDRGK1Q96HY6 314 aa10.11□□□□□ -0.79
CDC42-205ENST00000498236 ADAM33Q9BZ11 813 aa10.11□□□□□ -0.79
CDC42-205ENST00000498236 MAP2P11137 1827 aaKnown RBP10.11□□□□□ -0.79
CDC42-205ENST00000498236 ZNF521Q96K83 1311 aa10.1□□□□□ -0.79
CDC42-205ENST00000498236 XIRP1Q702N8 1843 aaKnown RBP10.1□□□□□ -0.79
CDC42-205ENST00000498236 KCTD12Q96CX2 325 aaKnown RBP10.1□□□□□ -0.79
CDC42-205ENST00000498236 IQSEC2Q5JU85 1478 aa10.1□□□□□ -0.79
CDC42-205ENST00000498236 PSME1Q06323 249 aa10.09□□□□□ -0.79
CDC42-205ENST00000498236 PADI6Q6TGC4 694 aa10.09□□□□□ -0.79
CDC42-205ENST00000498236 ORAI2Q96SN7 254 aa10.09□□□□□ -0.79
CDC42-205ENST00000498236 PNNQ9H307 717 aaKnown RBP10.09□□□□□ -0.79
CDC42-205ENST00000498236 RBM27Q9P2N5 1060 aaKnown RBP10.09□□□□□ -0.79
CDC42-205ENST00000498236 EMILIN1Q9Y6C2 1016 aa10.09□□□□□ -0.79
CDC42-205ENST00000498236 MARF1Q9Y4F3 1742 aaKnown RBP10.09□□□□□ -0.79
CDC42-205ENST00000498236 ZNF335Q9H4Z2 1342 aaPredicted RBP10.08□□□□□ -0.8
CDC42-205ENST00000498236 OATP04181 439 aa10.08□□□□□ -0.8
CDC42-205ENST00000498236 U2AF1L5P0DN76 240 aaPredicted RBP10.08□□□□□ -0.8
CDC42-205ENST00000498236 IL13P35225 146 aa10.08□□□□□ -0.8
CDC42-205ENST00000498236 U2AF1Q01081 240 aaKnown RBP eCLIP10.08□□□□□ -0.8
CDC42-205ENST00000498236 CCDC27Q2M243 656 aa10.08□□□□□ -0.8
CDC42-205ENST00000498236 TRPM3Q9HCF6 1732 aaPredicted RBP10.07□□□□□ -0.8
CDC42-205ENST00000498236 SBNO1A3KN83 1393 aa10.07□□□□□ -0.8
CDC42-205ENST00000498236 APAF1O14727 1248 aa10.07□□□□□ -0.8
CDC42-205ENST00000498236 FBLN1P23142 703 aa10.07□□□□□ -0.8
CDC42-205ENST00000498236 CLCN1P35523 988 aa10.07□□□□□ -0.8
CDC42-205ENST00000498236 RRS1Q15050 365 aaKnown RBP10.07□□□□□ -0.8
CDC42-205ENST00000498236 GIGYF2Q6Y7W6 1299 aaKnown RBP10.07□□□□□ -0.8
CDC42-205ENST00000498236 ABTB2Q8N961 1025 aa10.07□□□□□ -0.8
CDC42-205ENST00000498236 PLEKHF1Q96S99 279 aa10.07□□□□□ -0.8
CDC42-205ENST00000498236 KCNK17Q96T54 332 aa10.07□□□□□ -0.8
CDC42-205ENST00000498236 RTL1A6NKG5 1358 aa10.06□□□□□ -0.8
CDC42-205ENST00000498236 FLT4P35916 1363 aa10.06□□□□□ -0.8
CDC42-205ENST00000498236 FOXO3O43524 673 aa10.06□□□□□ -0.8
CDC42-205ENST00000498236 CCDC146Q8IYE0 955 aa10.06□□□□□ -0.8
CDC42-205ENST00000498236 TTC13Q8NBP0 860 aa10.06□□□□□ -0.8
CDC42-205ENST00000498236 PEAK1Q9H792 1746 aa10.06□□□□□ -0.8
CDC42-205ENST00000498236 SLIT3O75094 1523 aa10.06□□□□□ -0.8
CDC42-205ENST00000498236 MAP3K19Q56UN5 1328 aa10.06□□□□□ -0.8
CDC42-205ENST00000498236 U2SURPO15042 1029 aaKnown RBP10.05□□□□□ -0.8
CDC42-205ENST00000498236 PPM1GO15355 546 aaPredicted RBP10.05□□□□□ -0.8
CDC42-205ENST00000498236 PRSS12P56730 875 aa10.05□□□□□ -0.8
CDC42-205ENST00000498236 MDM2Q00987 491 aaPredicted RBP10.05□□□□□ -0.8
CDC42-205ENST00000498236 KRT28Q7Z3Y7 464 aa10.05□□□□□ -0.8
CDC42-205ENST00000498236 TRMT2AQ8IZ69 625 aaKnown RBP10.05□□□□□ -0.8
CDC42-205ENST00000498236 TCP11L2Q8N4U5 519 aa10.05□□□□□ -0.8
CDC42-205ENST00000498236 KCNH5Q8NCM2 988 aa10.05□□□□□ -0.8
CDC42-205ENST00000498236 REPIN1Q9BWE0 567 aaKnown RBP10.05□□□□□ -0.8
CDC42-205ENST00000498236 BCL2L12Q9HB09 334 aa10.05□□□□□ -0.8
CDC42-205ENST00000498236 GPCPD1Q9NPB8 672 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms