RNA–Protein interactions for RNA: ENST00000498226.5

SOX2-OT-217, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 560 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-217ENST00000498226 NBPF15Q8N660 670 aa8.99□□□□□ -0.97
SOX2-OT-217ENST00000498226 PPP1R12CQ9BZL4 782 aa8.99□□□□□ -0.97
SOX2-OT-217ENST00000498226 TFIP11Q9UBB9 837 aaKnown RBP8.99□□□□□ -0.97
SOX2-OT-217ENST00000498226 PSME1Q06323 249 aa8.98□□□□□ -0.97
SOX2-OT-217ENST00000498226 POU4F2Q12837 409 aa8.98□□□□□ -0.97
SOX2-OT-217ENST00000498226 NANOS1Q8WY41 292 aaKnown RBP8.98□□□□□ -0.97
SOX2-OT-217ENST00000498226 DYRK1BQ9Y463 629 aa8.98□□□□□ -0.97
SOX2-OT-217ENST00000498226 ERBB4Q15303 1308 aa8.98□□□□□ -0.97
SOX2-OT-217ENST00000498226 WIPF1O43516 503 aa8.97□□□□□ -0.97
SOX2-OT-217ENST00000498226 GNASQ5JWF2 1037 aa8.97□□□□□ -0.97
SOX2-OT-217ENST00000498226 TMEM214Q6NUQ4 689 aaKnown RBP8.97□□□□□ -0.97
SOX2-OT-217ENST00000498226 SLC4A9Q96Q91 983 aa8.97□□□□□ -0.97
SOX2-OT-217ENST00000498226 MKRN1Q9UHC7 482 aaKnown RBP8.97□□□□□ -0.97
SOX2-OT-217ENST00000498226 BACH1O14867 736 aa8.96□□□□□ -0.98
SOX2-OT-217ENST00000498226 SMTNP53814 917 aa8.96□□□□□ -0.98
SOX2-OT-217ENST00000498226 PPARGC1BQ86YN6 1023 aaKnown RBP8.96□□□□□ -0.98
SOX2-OT-217ENST00000498226 RHBDD1Q8TEB9 315 aa8.96□□□□□ -0.98
SOX2-OT-217ENST00000498226 CLDN10P78369 228 aa8.95□□□□□ -0.98
SOX2-OT-217ENST00000498226 MTFR1Q15390 333 aa8.95□□□□□ -0.98
SOX2-OT-217ENST00000498226 LARGE2Q8N3Y3 721 aa8.95□□□□□ -0.98
SOX2-OT-217ENST00000498226 TIMMDC1Q9NPL8 285 aa8.95□□□□□ -0.98
SOX2-OT-217ENST00000498226 DNAAF2Q9NVR5 837 aaKnown RBP8.95□□□□□ -0.98
SOX2-OT-217ENST00000498226 GMPRP36959 345 aa8.94□□□□□ -0.98
SOX2-OT-217ENST00000498226 OGFOD1Q8N543 542 aa8.94□□□□□ -0.98
SOX2-OT-217ENST00000498226 GMCL1Q96IK5 515 aa8.94□□□□□ -0.98
SOX2-OT-217ENST00000498226 ZNF358Q9NW07 568 aa8.94□□□□□ -0.98
SOX2-OT-217ENST00000498226 SERTAD1Q9UHV2 236 aa8.94□□□□□ -0.98
SOX2-OT-217ENST00000498226 KIAA1024Q9UPX6 916 aa8.94□□□□□ -0.98
SOX2-OT-217ENST00000498226 A6NJY4 79 aa8.93□□□□□ -0.98
SOX2-OT-217ENST00000498226 ZBTB7BO15156 539 aaPredicted RBP8.93□□□□□ -0.98
SOX2-OT-217ENST00000498226 C4orf17Q53FE4 359 aa8.93□□□□□ -0.98
SOX2-OT-217ENST00000498226 SIX5Q8N196 739 aa8.93□□□□□ -0.98
SOX2-OT-217ENST00000498226 TPCN2Q8NHX9 752 aa8.93□□□□□ -0.98
SOX2-OT-217ENST00000498226 A0A1B0GTH6 734 aa8.92□□□□□ -0.98
SOX2-OT-217ENST00000498226 CCDC102BQ68D86 513 aa8.92□□□□□ -0.98
SOX2-OT-217ENST00000498226 SV2AQ7L0J3 742 aa8.92□□□□□ -0.98
SOX2-OT-217ENST00000498226 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.92□□□□□ -0.98
SOX2-OT-217ENST00000498226 CDC14CA4D256 554 aa8.91□□□□□ -0.98
SOX2-OT-217ENST00000498226 M0R2N6 131 aa8.91□□□□□ -0.98
SOX2-OT-217ENST00000498226 CDK2AP1O14519 115 aa8.91□□□□□ -0.98
SOX2-OT-217ENST00000498226 LMOD1P29536 600 aaPredicted RBP8.91□□□□□ -0.98
SOX2-OT-217ENST00000498226 PHKA2P46019 1235 aa8.91□□□□□ -0.98
SOX2-OT-217ENST00000498226 CFAP70Q5T0N1 1121 aa8.91□□□□□ -0.98
SOX2-OT-217ENST00000498226 TRIM22Q8IYM9 498 aa8.91□□□□□ -0.98
SOX2-OT-217ENST00000498226 GAS2L1Q99501 681 aaPredicted RBP8.91□□□□□ -0.98
SOX2-OT-217ENST00000498226 NIFKQ9BYG3 293 aaKnown RBP8.91□□□□□ -0.98
SOX2-OT-217ENST00000498226 CUEDC1Q9NWM3 386 aaPredicted RBP8.91□□□□□ -0.98
SOX2-OT-217ENST00000498226 IQSEC3Q9UPP2 1182 aaPredicted RBP8.91□□□□□ -0.98
SOX2-OT-217ENST00000498226 H7C1W4 665 aa8.9□□□□□ -0.98
SOX2-OT-217ENST00000498226 F11P03951 625 aa8.9□□□□□ -0.98
SOX2-OT-217ENST00000498226 RASA1P20936 1047 aa8.9□□□□□ -0.98
SOX2-OT-217ENST00000498226 KANK4Q5T7N3 995 aaPredicted RBP8.9□□□□□ -0.98
SOX2-OT-217ENST00000498226 VWA5B2Q8N398 1253 aa8.9□□□□□ -0.98
SOX2-OT-217ENST00000498226 TIMELESSQ9UNS1 1208 aa8.9□□□□□ -0.98
SOX2-OT-217ENST00000498226 RBM19Q9Y4C8 960 aaKnown RBP8.9□□□□□ -0.98
SOX2-OT-217ENST00000498226 EPHA4P54764 986 aa8.89□□□□□ -0.99
SOX2-OT-217ENST00000498226 INSM1Q01101 510 aaPredicted RBP8.89□□□□□ -0.99
SOX2-OT-217ENST00000498226 LARP1Q6PKG0 1096 aaKnown RBP8.89□□□□□ -0.99
SOX2-OT-217ENST00000498226 RIPOR1Q6ZS17 1223 aa8.89□□□□□ -0.99
SOX2-OT-217ENST00000498226 ZNF295-AS1Q8N0V1 137 aa8.89□□□□□ -0.99
SOX2-OT-217ENST00000498226 ZNF837Q96EG3 531 aaPredicted RBP8.89□□□□□ -0.99
SOX2-OT-217ENST00000498226 ZNF594Q96JF6 807 aaPredicted RBP8.89□□□□□ -0.99
SOX2-OT-217ENST00000498226 VRTNQ9H8Y1 702 aa8.89□□□□□ -0.99
SOX2-OT-217ENST00000498226 SCHIP1Q9P0W5 487 aaPredicted RBP8.89□□□□□ -0.99
SOX2-OT-217ENST00000498226 FAM196BA6NMK8 535 aa8.88□□□□□ -0.99
SOX2-OT-217ENST00000498226 DKK1O94907 266 aa8.88□□□□□ -0.99
SOX2-OT-217ENST00000498226 PLA2G4AP47712 749 aa8.88□□□□□ -0.99
SOX2-OT-217ENST00000498226 C14orf37Q86TY3 774 aa8.88□□□□□ -0.99
SOX2-OT-217ENST00000498226 GPR161Q8N6U8 529 aaKnown RBP8.88□□□□□ -0.99
SOX2-OT-217ENST00000498226 FOXK2Q01167 660 aa8.87□□□□□ -0.99
SOX2-OT-217ENST00000498226 PTK7Q13308 1070 aa8.87□□□□□ -0.99
SOX2-OT-217ENST00000498226 C1orf216Q8TAB5 229 aa8.87□□□□□ -0.99
SOX2-OT-217ENST00000498226 USP3Q9Y6I4 520 aa8.87□□□□□ -0.99
SOX2-OT-217ENST00000498226 USP17L15C9J2P7 530 aa8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 USP17L10C9JJH3 530 aa8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 USP17L13C9JLJ4 530 aa8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 USP17L12C9JPN9 530 aa8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 USP17L11C9JVI0 530 aa8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 USP17L21D6R901 530 aa8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 USP17L18D6R9N7 530 aa8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 USP17L22D6RA61 530 aa8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 USP17L17D6RBQ6 530 aa8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 USP17L19D6RCP7 530 aa8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 USP17L20D6RJB6 530 aa8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 USP17L24Q0WX57 530 aa8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 LBRQ14739 615 aaKnown RBP8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 DBN1Q16643 649 aa8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 CRTC2Q53ET0 693 aaPredicted RBP8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 GPAMQ9HCL2 828 aa8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 CABP1Q9NZU7 370 aa8.86□□□□□ -0.99
SOX2-OT-217ENST00000498226 MSX1P28360 303 aa8.85□□□□□ -0.99
SOX2-OT-217ENST00000498226 SEC13P55735 322 aa8.85□□□□□ -0.99
SOX2-OT-217ENST00000498226 NBPF1Q3BBV0 1214 aa8.85□□□□□ -0.99
SOX2-OT-217ENST00000498226 FOXR1Q6PIV2 292 aa8.85□□□□□ -0.99
SOX2-OT-217ENST00000498226 ERICH6Q7L0X2 663 aa8.85□□□□□ -0.99
SOX2-OT-217ENST00000498226 SLC9A9Q8IVB4 645 aa8.85□□□□□ -0.99
SOX2-OT-217ENST00000498226 TNS4Q8IZW8 715 aa8.85□□□□□ -0.99
SOX2-OT-217ENST00000498226 COL25A1Q9BXS0 654 aaPredicted RBP8.85□□□□□ -0.99
SOX2-OT-217ENST00000498226 NUCKS1Q9H1E3 243 aaKnown RBP8.85□□□□□ -0.99
SOX2-OT-217ENST00000498226 SFI1A8K8P3 1242 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms