RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 HMGB2P26583 209 aaKnown RBP22.88■■□□□ 1.25
CTDSP1-215ENST00000498160 PRIM1P49642 420 aaKnown RBP22.88■■□□□ 1.25
CTDSP1-215ENST00000498160 SMARCC1Q92922 1105 aaPredicted RBP22.88■■□□□ 1.25
CTDSP1-215ENST00000498160 SYTL4Q96C24 671 aaPredicted RBP22.88■■□□□ 1.25
CTDSP1-215ENST00000498160 MYH16Q9H6N6 1097 aa22.88■■□□□ 1.25
CTDSP1-215ENST00000498160 NFATC2IPQ8NCF5 419 aa22.87■■□□□ 1.25
CTDSP1-215ENST00000498160 KAT6BQ8WYB5 2073 aa22.86■■□□□ 1.25
CTDSP1-215ENST00000498160 BTBD11A6QL63 1104 aa22.86■■□□□ 1.25
CTDSP1-215ENST00000498160 E9PSI1 815 aa22.86■■□□□ 1.25
CTDSP1-215ENST00000498160 TTC5Q8N0Z6 440 aa22.86■■□□□ 1.25
CTDSP1-215ENST00000498160 ACSBG1Q96GR2 724 aa22.86■■□□□ 1.25
CTDSP1-215ENST00000498160 FAM182BQ5T319 152 aa22.85■■□□□ 1.25
CTDSP1-215ENST00000498160 CCDC125Q86Z20 511 aa22.85■■□□□ 1.25
CTDSP1-215ENST00000498160 THUMPD2Q9BTF0 503 aaKnown RBP22.85■■□□□ 1.25
CTDSP1-215ENST00000498160 PAPPAQ13219 1627 aa22.84■■□□□ 1.25
CTDSP1-215ENST00000498160 CHL1O00533 1208 aa22.84■■□□□ 1.25
CTDSP1-215ENST00000498160 PIGBQ92521 554 aa22.84■■□□□ 1.25
CTDSP1-215ENST00000498160 TSPYL4Q9UJ04 414 aa22.84■■□□□ 1.25
CTDSP1-215ENST00000498160 ZNF853P0CG23 659 aa22.83■■□□□ 1.25
CTDSP1-215ENST00000498160 KDM3BQ7LBC6 1761 aa22.82■■□□□ 1.24
CTDSP1-215ENST00000498160 BTAF1O14981 1849 aa22.82■■□□□ 1.24
CTDSP1-215ENST00000498160 SF3B2Q13435 895 aaKnown RBP22.81■■□□□ 1.24
CTDSP1-215ENST00000498160 ZNF790Q6PG37 636 aa22.81■■□□□ 1.24
CTDSP1-215ENST00000498160 CHMP4AQ9BY43 222 aa22.81■■□□□ 1.24
CTDSP1-215ENST00000498160 SOS1Q07889 1333 aaPredicted RBP22.81■■□□□ 1.24
CTDSP1-215ENST00000498160 KCNQ2O43526 872 aa22.8■■□□□ 1.24
CTDSP1-215ENST00000498160 TRIM37O94972 964 aa22.8■■□□□ 1.24
CTDSP1-215ENST00000498160 LAS1LQ9Y4W2 734 aaKnown RBP22.8■■□□□ 1.24
CTDSP1-215ENST00000498160 SENP3-EIF4A1A0A087X0R7 540 aa22.79■■□□□ 1.24
CTDSP1-215ENST00000498160 YTHDC1Q96MU7 727 aaKnown RBP22.79■■□□□ 1.24
CTDSP1-215ENST00000498160 FMNL2Q96PY5 1086 aa22.79■■□□□ 1.24
CTDSP1-215ENST00000498160 RGPD3A6NKT7 1758 aaPredicted RBP22.78■■□□□ 1.24
CTDSP1-215ENST00000498160 RGPD4Q7Z3J3 1758 aa22.78■■□□□ 1.24
CTDSP1-215ENST00000498160 SLFN5Q08AF3 891 aa22.78■■□□□ 1.24
CTDSP1-215ENST00000498160 VSIG10Q8N0Z9 540 aa22.78■■□□□ 1.24
CTDSP1-215ENST00000498160 MBIPQ9NS73 344 aa22.78■■□□□ 1.24
CTDSP1-215ENST00000498160 UBR2Q8IWV8 1755 aa22.78■■□□□ 1.24
CTDSP1-215ENST00000498160 ZNF831Q5JPB2 1677 aa22.77■■□□□ 1.24
CTDSP1-215ENST00000498160 TNS1Q9HBL0 1735 aaKnown RBP22.77■■□□□ 1.23
CTDSP1-215ENST00000498160 PALLDQ8WX93 1383 aa22.76■■□□□ 1.23
CTDSP1-215ENST00000498160 PLSCR1O15162 318 aa22.76■■□□□ 1.23
CTDSP1-215ENST00000498160 HOXB7P09629 217 aa22.76■■□□□ 1.23
CTDSP1-215ENST00000498160 ATG3Q9NT62 314 aa22.76■■□□□ 1.23
CTDSP1-215ENST00000498160 TEX13AQ9BXU3 409 aaPredicted RBP22.75■■□□□ 1.23
CTDSP1-215ENST00000498160 FANCIQ9NVI1 1328 aa22.75■■□□□ 1.23
CTDSP1-215ENST00000498160 CT47B1P0C2W7 299 aaPredicted RBP22.74■■□□□ 1.23
CTDSP1-215ENST00000498160 TRMT2AQ8IZ69 625 aaKnown RBP22.74■■□□□ 1.23
CTDSP1-215ENST00000498160 ASAP1Q9ULH1 1129 aa22.74■■□□□ 1.23
CTDSP1-215ENST00000498160 CICQ96RK0 1608 aaPredicted RBP22.74■■□□□ 1.23
CTDSP1-215ENST00000498160 KCPQ6ZWJ8 1503 aa22.73■■□□□ 1.23
CTDSP1-215ENST00000498160 APBA3O96018 575 aa22.73■■□□□ 1.23
CTDSP1-215ENST00000498160 BAG6P46379 1132 aa22.73■■□□□ 1.23
CTDSP1-215ENST00000498160 EIF4A1P60842 406 aaKnown RBP22.73■■□□□ 1.23
CTDSP1-215ENST00000498160 LY75O60449 1722 aa22.73■■□□□ 1.23
CTDSP1-215ENST00000498160 HEG1Q9ULI3 1381 aa22.73■■□□□ 1.23
CTDSP1-215ENST00000498160 SLC39A6Q13433 755 aa22.72■■□□□ 1.23
CTDSP1-215ENST00000498160 SLC27A3Q5K4L6 730 aa22.72■■□□□ 1.23
CTDSP1-215ENST00000498160 MIS18AQ9NYP9 233 aa22.72■■□□□ 1.23
CTDSP1-215ENST00000498160 SNRPA1P09661 255 aaKnown RBP22.71■■□□□ 1.23
CTDSP1-215ENST00000498160 LOC102724428A0A0B4J2F2 783 aa22.7■■□□□ 1.22
CTDSP1-215ENST00000498160 SIK1P57059 783 aa22.7■■□□□ 1.22
CTDSP1-215ENST00000498160 DUSP27Q5VZP5 1158 aa22.7■■□□□ 1.22
CTDSP1-215ENST00000498160 TSR2Q969E8 191 aaKnown RBP22.7■■□□□ 1.22
CTDSP1-215ENST00000498160 ZNF428Q96B54 188 aa22.7■■□□□ 1.22
CTDSP1-215ENST00000498160 RBM42Q9BTD8 480 aaKnown RBP22.7■■□□□ 1.22
CTDSP1-215ENST00000498160 CDCA7LQ96GN5 454 aa22.69■■□□□ 1.22
CTDSP1-215ENST00000498160 ZNF496Q96IT1 587 aaPredicted RBP22.69■■□□□ 1.22
CTDSP1-215ENST00000498160 SPINK5Q9NQ38 1064 aaPredicted RBP22.69■■□□□ 1.22
CTDSP1-215ENST00000498160 PTCD1O75127 700 aaKnown RBP22.68■■□□□ 1.22
CTDSP1-215ENST00000498160 GIGYF1O75420 1035 aaPredicted RBP22.67■■□□□ 1.22
CTDSP1-215ENST00000498160 PTF1AQ7RTS3 328 aa22.67■■□□□ 1.22
CTDSP1-215ENST00000498160 LAMB4A4D0S4 1761 aa22.67■■□□□ 1.22
CTDSP1-215ENST00000498160 KCNQ3O43525 872 aa22.66■■□□□ 1.22
CTDSP1-215ENST00000498160 STARD3NLO95772 234 aa22.66■■□□□ 1.22
CTDSP1-215ENST00000498160 ATP6V1AP38606 617 aa22.66■■□□□ 1.22
CTDSP1-215ENST00000498160 CCNL1Q9UK58 526 aaPredicted RBP22.66■■□□□ 1.22
CTDSP1-215ENST00000498160 ERBB4Q15303 1308 aa22.65■■□□□ 1.22
CTDSP1-215ENST00000498160 EXOSC9Q06265 439 aaKnown RBP22.65■■□□□ 1.22
CTDSP1-215ENST00000498160 TWISTNBQ3B726 338 aaPredicted RBP22.65■■□□□ 1.22
CTDSP1-215ENST00000498160 C5P01031 1676 aa22.64■■□□□ 1.21
CTDSP1-215ENST00000498160 TXNRD1Q16881 649 aa22.63■■□□□ 1.21
CTDSP1-215ENST00000498160 UPF1Q92900 1129 aaKnown RBP eCLIP22.63■■□□□ 1.214e-7■■■□□ 16.6
CTDSP1-215ENST00000498160 TJP1Q07157 1748 aa22.62■■□□□ 1.21
CTDSP1-215ENST00000498160 EP400Q96L91 3159 aa22.62■■□□□ 1.21
CTDSP1-215ENST00000498160 ILDR2Q71H61 639 aa22.62■■□□□ 1.21
CTDSP1-215ENST00000498160 CCDC30Q5VVM6 783 aa22.61■■□□□ 1.21
CTDSP1-215ENST00000498160 C8orf58Q8NAV2 365 aa22.61■■□□□ 1.21
CTDSP1-215ENST00000498160 CAMKK2Q96RR4 588 aa22.61■■□□□ 1.21
CTDSP1-215ENST00000498160 COL5A3P25940 1745 aaPredicted RBP22.6■■□□□ 1.21
CTDSP1-215ENST00000498160 CNTNAP4Q9C0A0 1308 aa22.59■■□□□ 1.21
CTDSP1-215ENST00000498160 RC3H1Q5TC82 1133 aaKnown RBP22.59■■□□□ 1.21
CTDSP1-215ENST00000498160 HDGFL1Q5TGJ6 251 aa22.59■■□□□ 1.21
CTDSP1-215ENST00000498160 TAF1LQ8IZX4 1826 aa22.59■■□□□ 1.21
CTDSP1-215ENST00000498160 RREB1Q92766 1687 aa22.58■■□□□ 1.21
CTDSP1-215ENST00000498160 VAMP4O75379 141 aa22.58■■□□□ 1.21
CTDSP1-215ENST00000498160 ALDH1L2Q3SY69 923 aa22.58■■□□□ 1.21
CTDSP1-215ENST00000498160 DNAJC10Q8IXB1 793 aa22.58■■□□□ 1.21
CTDSP1-215ENST00000498160 SLC4A9Q96Q91 983 aa22.58■■□□□ 1.21
CTDSP1-215ENST00000498160 STK31Q9BXU1 1019 aa22.58■■□□□ 1.21
CTDSP1-215ENST00000498160 CYP19A1P11511 503 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms