RNA–Protein interactions for RNA: ENST00000498053.5

LRRFIP1-215, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-215ENST00000498053 NFATC2IPQ8NCF5 419 aa23.45■■□□□ 1.34
LRRFIP1-215ENST00000498053 PNNQ9H307 717 aaKnown RBP23.45■■□□□ 1.34
LRRFIP1-215ENST00000498053 ASAP1Q9ULH1 1129 aa23.45■■□□□ 1.34
LRRFIP1-215ENST00000498053 RRP7AQ9Y3A4 280 aaKnown RBP23.45■■□□□ 1.34
LRRFIP1-215ENST00000498053 SLC52A2Q9HAB3 445 aa23.44■■□□□ 1.34
LRRFIP1-215ENST00000498053 SENP3-EIF4A1A0A087X0R7 540 aa23.43■■□□□ 1.34
LRRFIP1-215ENST00000498053 RUNDC1Q96C34 613 aa23.43■■□□□ 1.34
LRRFIP1-215ENST00000498053 CEMIPQ8WUJ3 1361 aa23.42■■□□□ 1.34
LRRFIP1-215ENST00000498053 ATG3Q9NT62 314 aa23.42■■□□□ 1.34
LRRFIP1-215ENST00000498053 TMPOP42166 694 aaKnown RBP23.41■■□□□ 1.34
LRRFIP1-215ENST00000498053 LRRC4BQ9NT99 713 aa23.41■■□□□ 1.34
LRRFIP1-215ENST00000498053 TAF1LQ8IZX4 1826 aa23.4■■□□□ 1.34
LRRFIP1-215ENST00000498053 NEUROD2Q15784 382 aa23.4■■□□□ 1.34
LRRFIP1-215ENST00000498053 MIER1Q8N108 512 aa23.4■■□□□ 1.34
LRRFIP1-215ENST00000498053 RTF1Q92541 710 aaKnown RBP23.4■■□□□ 1.34
LRRFIP1-215ENST00000498053 THUMPD2Q9BTF0 503 aaKnown RBP23.4■■□□□ 1.34
LRRFIP1-215ENST00000498053 C5P01031 1676 aa23.4■■□□□ 1.34
LRRFIP1-215ENST00000498053 FAM9BQ8IZU0 186 aa23.39■■□□□ 1.33
LRRFIP1-215ENST00000498053 ANO8Q9HCE9 1232 aaPredicted RBP23.39■■□□□ 1.33
LRRFIP1-215ENST00000498053 UBR2Q8IWV8 1755 aa23.38■■□□□ 1.33
LRRFIP1-215ENST00000498053 RIPK4P57078 832 aa23.38■■□□□ 1.33
LRRFIP1-215ENST00000498053 SLC39A6Q13433 755 aa23.38■■□□□ 1.33
LRRFIP1-215ENST00000498053 CCNL1Q9UK58 526 aaPredicted RBP23.38■■□□□ 1.33
LRRFIP1-215ENST00000498053 TEFQ10587 303 aa23.37■■□□□ 1.33
LRRFIP1-215ENST00000498053 SMARCC1Q92922 1105 aaPredicted RBP23.37■■□□□ 1.33
LRRFIP1-215ENST00000498053 TUBGCP6Q96RT7 1819 aa23.36■■□□□ 1.33
LRRFIP1-215ENST00000498053 APAF1O14727 1248 aa23.36■■□□□ 1.33
LRRFIP1-215ENST00000498053 KCPQ6ZWJ8 1503 aa23.36■■□□□ 1.33
LRRFIP1-215ENST00000498053 TJP1Q07157 1748 aa23.35■■□□□ 1.33
LRRFIP1-215ENST00000498053 PSDA5PKW4 1024 aaPredicted RBP23.34■■□□□ 1.33
LRRFIP1-215ENST00000498053 HTATSF1O43719 755 aaKnown RBP23.34■■□□□ 1.33
LRRFIP1-215ENST00000498053 SLC4A9Q96Q91 983 aa23.34■■□□□ 1.33
LRRFIP1-215ENST00000498053 RBM42Q9BTD8 480 aaKnown RBP23.34■■□□□ 1.33
LRRFIP1-215ENST00000498053 COL5A3P25940 1745 aaPredicted RBP23.33■■□□□ 1.33
LRRFIP1-215ENST00000498053 KDM3BQ7LBC6 1761 aa23.33■■□□□ 1.33
LRRFIP1-215ENST00000498053 LOC102724428A0A0B4J2F2 783 aa23.33■■□□□ 1.33
LRRFIP1-215ENST00000498053 CCER2I3L3R5 266 aa23.33■■□□□ 1.33
LRRFIP1-215ENST00000498053 PTCD1O75127 700 aaKnown RBP23.33■■□□□ 1.33
LRRFIP1-215ENST00000498053 SIK1P57059 783 aa23.33■■□□□ 1.33
LRRFIP1-215ENST00000498053 SLC27A3Q5K4L6 730 aa23.33■■□□□ 1.33
LRRFIP1-215ENST00000498053 ITPK1Q13572 414 aa23.32■■□□□ 1.32
LRRFIP1-215ENST00000498053 ZNF827Q17R98 1081 aa23.32■■□□□ 1.32
LRRFIP1-215ENST00000498053 TRIM35Q9UPQ4 493 aa23.32■■□□□ 1.32
LRRFIP1-215ENST00000498053 C4BP0C0L5 1744 aa23.32■■□□□ 1.32
LRRFIP1-215ENST00000498053 ZNF831Q5JPB2 1677 aa23.32■■□□□ 1.32
LRRFIP1-215ENST00000498053 KCNQ3O43525 872 aa23.31■■□□□ 1.32
LRRFIP1-215ENST00000498053 R3HDM1Q15032 1099 aaKnown RBP23.31■■□□□ 1.32
LRRFIP1-215ENST00000498053 ATP6V1AP38606 617 aa23.3■■□□□ 1.32
LRRFIP1-215ENST00000498053 MIS18AQ9NYP9 233 aa23.3■■□□□ 1.32
LRRFIP1-215ENST00000498053 CICQ96RK0 1608 aaPredicted RBP23.3■■□□□ 1.32
LRRFIP1-215ENST00000498053 BTBD11A6QL63 1104 aa23.29■■□□□ 1.32
LRRFIP1-215ENST00000498053 LINC00116Q8NCU8 138 aa23.29■■□□□ 1.32
LRRFIP1-215ENST00000498053 LMOD3Q0VAK6 560 aa23.28■■□□□ 1.32
LRRFIP1-215ENST00000498053 NBPF14Q5TI25 921 aa23.27■■□□□ 1.32
LRRFIP1-215ENST00000498053 ZNF790Q6PG37 636 aa23.27■■□□□ 1.32
LRRFIP1-215ENST00000498053 STK32BQ9NY57 414 aa23.27■■□□□ 1.32
LRRFIP1-215ENST00000498053 SLC15A2Q16348 729 aa23.26■■□□□ 1.31
LRRFIP1-215ENST00000498053 TTC5Q8N0Z6 440 aa23.26■■□□□ 1.31
LRRFIP1-215ENST00000498053 AKT1S1Q96B36 256 aa23.26■■□□□ 1.31
LRRFIP1-215ENST00000498053 UBR3Q6ZT12 1888 aa23.26■■□□□ 1.31
LRRFIP1-215ENST00000498053 MYH14Q7Z406 1995 aaKnown RBP23.25■■□□□ 1.31
LRRFIP1-215ENST00000498053 CASZ1Q86V15 1759 aa23.25■■□□□ 1.31
LRRFIP1-215ENST00000498053 TAF7Q15545 349 aaPredicted RBP23.25■■□□□ 1.31
LRRFIP1-215ENST00000498053 ZNF496Q96IT1 587 aaPredicted RBP23.25■■□□□ 1.31
LRRFIP1-215ENST00000498053 QSER1Q2KHR3 1735 aa23.25■■□□□ 1.31
LRRFIP1-215ENST00000498053 SALL2Q9Y467 1007 aaPredicted RBP23.24■■□□□ 1.31
LRRFIP1-215ENST00000498053 SMIM5Q71RC9 77 aa23.23■■□□□ 1.31
LRRFIP1-215ENST00000498053 DNAJC10Q8IXB1 793 aa23.23■■□□□ 1.31
LRRFIP1-215ENST00000498053 PDGFDQ9GZP0 370 aaPredicted RBP23.23■■□□□ 1.31
LRRFIP1-215ENST00000498053 AMIGO3Q86WK7 504 aa23.22■■□□□ 1.31
LRRFIP1-215ENST00000498053 HEG1Q9ULI3 1381 aa23.22■■□□□ 1.31
LRRFIP1-215ENST00000498053 PRAMEF22A3QJZ6 481 aa23.2■■□□□ 1.3
LRRFIP1-215ENST00000498053 LAS1LQ9Y4W2 734 aaKnown RBP23.2■■□□□ 1.3
LRRFIP1-215ENST00000498053 PNPLA7Q6ZV29 1317 aa23.19■■□□□ 1.3
LRRFIP1-215ENST00000498053 AK7Q96M32 723 aa23.19■■□□□ 1.3
LRRFIP1-215ENST00000498053 FMNL2Q96PY5 1086 aa23.19■■□□□ 1.3
LRRFIP1-215ENST00000498053 TFCP2L1Q9NZI6 479 aa23.19■■□□□ 1.3
LRRFIP1-215ENST00000498053 TSPYL4Q9UJ04 414 aa23.19■■□□□ 1.3
LRRFIP1-215ENST00000498053 LAMB4A4D0S4 1761 aa23.19■■□□□ 1.3
LRRFIP1-215ENST00000498053 CNTNAP4Q9C0A0 1308 aa23.16■■□□□ 1.3
LRRFIP1-215ENST00000498053 GNPATO15228 680 aa23.16■■□□□ 1.3
LRRFIP1-215ENST00000498053 PHF14O94880 888 aa23.16■■□□□ 1.3
LRRFIP1-215ENST00000498053 CRKLP46109 303 aaKnown RBP23.16■■□□□ 1.3
LRRFIP1-215ENST00000498053 WWC1Q8IX03 1113 aa23.16■■□□□ 1.3
LRRFIP1-215ENST00000498053 VSIG10Q8N0Z9 540 aa23.16■■□□□ 1.3
LRRFIP1-215ENST00000498053 C4AP0C0L4 1744 aa23.16■■□□□ 1.3
LRRFIP1-215ENST00000498053 EIF4A1P60842 406 aaKnown RBP23.15■■□□□ 1.3
LRRFIP1-215ENST00000498053 CYP19A1P11511 503 aaPredicted RBP23.14■■□□□ 1.29
LRRFIP1-215ENST00000498053 CCDC27Q2M243 656 aa23.14■■□□□ 1.29
LRRFIP1-215ENST00000498053 CHL1O00533 1208 aa23.13■■□□□ 1.29
LRRFIP1-215ENST00000498053 KRT24Q2M2I5 525 aa23.13■■□□□ 1.29
LRRFIP1-215ENST00000498053 INTS5Q6P9B9 1019 aaKnown RBP23.12■■□□□ 1.29
LRRFIP1-215ENST00000498053 COL23A1Q86Y22 540 aaPredicted RBP23.12■■□□□ 1.29
LRRFIP1-215ENST00000498053 MBIPQ9NS73 344 aa23.12■■□□□ 1.29
LRRFIP1-215ENST00000498053 ZBTB1Q9Y2K1 713 aa23.12■■□□□ 1.29
LRRFIP1-215ENST00000498053 ZNF853P0CG23 659 aa23.11■■□□□ 1.29
LRRFIP1-215ENST00000498053 CFAP44Q96MT7 982 aa23.11■■□□□ 1.29
LRRFIP1-215ENST00000498053 CCDC87Q9NVE4 849 aa23.11■■□□□ 1.29
LRRFIP1-215ENST00000498053 USP16Q9Y5T5 823 aa23.11■■□□□ 1.29
LRRFIP1-215ENST00000498053 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms