RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 KCNQ4P56696 695 aa26.18■■□□□ 1.78
HLA-B-255ENST00000498007 IL17REQ8NFR9 667 aa26.18■■□□□ 1.78
HLA-B-255ENST00000498007 ATG3Q9NT62 314 aa26.18■■□□□ 1.78
HLA-B-255ENST00000498007 CCNL1Q9UK58 526 aaPredicted RBP26.18■■□□□ 1.78
HLA-B-255ENST00000498007 C5P01031 1676 aa26.18■■□□□ 1.78
HLA-B-255ENST00000498007 SLC27A3Q5K4L6 730 aa26.17■■□□□ 1.78
HLA-B-255ENST00000498007 RUNDC1Q96C34 613 aa26.17■■□□□ 1.78
HLA-B-255ENST00000498007 LRRC4BQ9NT99 713 aa26.17■■□□□ 1.78
HLA-B-255ENST00000498007 TEFQ10587 303 aa26.16■■□□□ 1.78
HLA-B-255ENST00000498007 DIEXFQ68CQ4 756 aaKnown RBP26.16■■□□□ 1.78
HLA-B-255ENST00000498007 MCM10Q7L590 875 aa26.16■■□□□ 1.78
HLA-B-255ENST00000498007 DCTN1Q14203 1278 aa26.15■■□□□ 1.78
HLA-B-255ENST00000498007 NBPF14Q5TI25 921 aa26.15■■□□□ 1.78
HLA-B-255ENST00000498007 ANO8Q9HCE9 1232 aaPredicted RBP26.15■■□□□ 1.78
HLA-B-255ENST00000498007 CEMIPQ8WUJ3 1361 aa26.15■■□□□ 1.78
HLA-B-255ENST00000498007 PSDA5PKW4 1024 aaPredicted RBP26.14■■□□□ 1.78
HLA-B-255ENST00000498007 TAF1LQ8IZX4 1826 aa26.14■■□□□ 1.77
HLA-B-255ENST00000498007 R3HDM1Q15032 1099 aaKnown RBP26.13■■□□□ 1.77
HLA-B-255ENST00000498007 PNISRQ8TF01 805 aaKnown RBP26.13■■□□□ 1.77
HLA-B-255ENST00000498007 RRP7AQ9Y3A4 280 aaKnown RBP26.13■■□□□ 1.77
HLA-B-255ENST00000498007 HTATSF1O43719 755 aaKnown RBP26.12■■□□□ 1.77
HLA-B-255ENST00000498007 LOC102724428A0A0B4J2F2 783 aa26.11■■□□□ 1.77
HLA-B-255ENST00000498007 TMPOP42166 694 aaKnown RBP26.11■■□□□ 1.77
HLA-B-255ENST00000498007 SIK1P57059 783 aa26.11■■□□□ 1.77
HLA-B-255ENST00000498007 RIPK4P57078 832 aa26.11■■□□□ 1.77
HLA-B-255ENST00000498007 NEUROD2Q15784 382 aa26.11■■□□□ 1.77
HLA-B-255ENST00000498007 RBM42Q9BTD8 480 aaKnown RBP26.11■■□□□ 1.77
HLA-B-255ENST00000498007 SLC39A6Q13433 755 aa26.1■■□□□ 1.77
HLA-B-255ENST00000498007 STK32BQ9NY57 414 aa26.1■■□□□ 1.77
HLA-B-255ENST00000498007 UBR2Q8IWV8 1755 aa26.1■■□□□ 1.77
HLA-B-255ENST00000498007 PTCD1O75127 700 aaKnown RBP26.09■■□□□ 1.77
HLA-B-255ENST00000498007 ZNF827Q17R98 1081 aa26.08■■□□□ 1.77
HLA-B-255ENST00000498007 THUMPD2Q9BTF0 503 aaKnown RBP26.08■■□□□ 1.77
HLA-B-255ENST00000498007 ZNF831Q5JPB2 1677 aa26.08■■□□□ 1.77
HLA-B-255ENST00000498007 KCPQ6ZWJ8 1503 aa26.08■■□□□ 1.77
HLA-B-255ENST00000498007 C4BP0C0L5 1744 aa26.08■■□□□ 1.76
HLA-B-255ENST00000498007 TUBGCP6Q96RT7 1819 aa26.07■■□□□ 1.76
HLA-B-255ENST00000498007 ATP6V1AP38606 617 aa26.07■■□□□ 1.76
HLA-B-255ENST00000498007 TJP1Q07157 1748 aa26.07■■□□□ 1.76
HLA-B-255ENST00000498007 LMOD3Q0VAK6 560 aa26.06■■□□□ 1.76
HLA-B-255ENST00000498007 FAM9BQ8IZU0 186 aa26.06■■□□□ 1.76
HLA-B-255ENST00000498007 COL5A3P25940 1745 aaPredicted RBP26.05■■□□□ 1.76
HLA-B-255ENST00000498007 BTBD11A6QL63 1104 aa26.05■■□□□ 1.76
HLA-B-255ENST00000498007 APAF1O14727 1248 aa26.05■■□□□ 1.76
HLA-B-255ENST00000498007 SLC15A2Q16348 729 aa26.05■■□□□ 1.76
HLA-B-255ENST00000498007 TTC5Q8N0Z6 440 aa26.05■■□□□ 1.76
HLA-B-255ENST00000498007 ITPK1Q13572 414 aa26.04■■□□□ 1.76
HLA-B-255ENST00000498007 SLC4A9Q96Q91 983 aa26.04■■□□□ 1.76
HLA-B-255ENST00000498007 CICQ96RK0 1608 aaPredicted RBP26.03■■□□□ 1.76
HLA-B-255ENST00000498007 LINC00116Q8NCU8 138 aa26.03■■□□□ 1.76
HLA-B-255ENST00000498007 AKT1S1Q96B36 256 aa26.03■■□□□ 1.76
HLA-B-255ENST00000498007 SENP3-EIF4A1A0A087X0R7 540 aa26.02■■□□□ 1.76
HLA-B-255ENST00000498007 ZNF790Q6PG37 636 aa26.02■■□□□ 1.76
HLA-B-255ENST00000498007 QSER1Q2KHR3 1735 aa26.02■■□□□ 1.76
HLA-B-255ENST00000498007 KDM3BQ7LBC6 1761 aa26.02■■□□□ 1.76
HLA-B-255ENST00000498007 CASZ1Q86V15 1759 aa26.01■■□□□ 1.75
HLA-B-255ENST00000498007 TFCP2L1Q9NZI6 479 aa26■■□□□ 1.75
HLA-B-255ENST00000498007 CCER2I3L3R5 266 aa25.99■■□□□ 1.75
HLA-B-255ENST00000498007 TAF7Q15545 349 aaPredicted RBP25.99■■□□□ 1.75
HLA-B-255ENST00000498007 AK7Q96M32 723 aa25.99■■□□□ 1.75
HLA-B-255ENST00000498007 TRIM35Q9UPQ4 493 aa25.99■■□□□ 1.75
HLA-B-255ENST00000498007 KCNQ3O43525 872 aa25.98■■□□□ 1.75
HLA-B-255ENST00000498007 HMGB2P26583 209 aaKnown RBP25.98■■□□□ 1.75
HLA-B-255ENST00000498007 MIER1Q8N108 512 aa25.98■■□□□ 1.75
HLA-B-255ENST00000498007 MIS18AQ9NYP9 233 aa25.98■■□□□ 1.75
HLA-B-255ENST00000498007 UBR3Q6ZT12 1888 aa25.98■■□□□ 1.75
HLA-B-255ENST00000498007 ZNF496Q96IT1 587 aaPredicted RBP25.97■■□□□ 1.75
HLA-B-255ENST00000498007 DNAJC10Q8IXB1 793 aa25.95■■□□□ 1.74
HLA-B-255ENST00000498007 FMNL2Q96PY5 1086 aa25.95■■□□□ 1.74
HLA-B-255ENST00000498007 PDGFDQ9GZP0 370 aaPredicted RBP25.95■■□□□ 1.74
HLA-B-255ENST00000498007 HEG1Q9ULI3 1381 aa25.95■■□□□ 1.74
HLA-B-255ENST00000498007 PNPLA7Q6ZV29 1317 aa25.94■■□□□ 1.74
HLA-B-255ENST00000498007 GNPATO15228 680 aa25.93■■□□□ 1.74
HLA-B-255ENST00000498007 CNTNAP4Q9C0A0 1308 aa25.92■■□□□ 1.74
HLA-B-255ENST00000498007 PHF14O94880 888 aa25.92■■□□□ 1.74
HLA-B-255ENST00000498007 VSIG10Q8N0Z9 540 aa25.92■■□□□ 1.74
HLA-B-255ENST00000498007 TSPYL4Q9UJ04 414 aa25.92■■□□□ 1.74
HLA-B-255ENST00000498007 MYH14Q7Z406 1995 aaKnown RBP25.91■■□□□ 1.74
HLA-B-255ENST00000498007 LAS1LQ9Y4W2 734 aaKnown RBP25.91■■□□□ 1.74
HLA-B-255ENST00000498007 MSH5O43196 834 aa25.9■■□□□ 1.74
HLA-B-255ENST00000498007 CRKLP46109 303 aaKnown RBP25.9■■□□□ 1.74
HLA-B-255ENST00000498007 SMIM5Q71RC9 77 aa25.9■■□□□ 1.74
HLA-B-255ENST00000498007 AMIGO3Q86WK7 504 aa25.9■■□□□ 1.74
HLA-B-255ENST00000498007 SALL2Q9Y467 1007 aaPredicted RBP25.89■■□□□ 1.74
HLA-B-255ENST00000498007 LAMB4A4D0S4 1761 aa25.89■■□□□ 1.73
HLA-B-255ENST00000498007 ZBTB7AO95365 584 aa25.88■■□□□ 1.73
HLA-B-255ENST00000498007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.87■■□□□ 1.73
HLA-B-255ENST00000498007 CYP19A1P11511 503 aaPredicted RBP25.87■■□□□ 1.73
HLA-B-255ENST00000498007 RC3H1Q5TC82 1133 aaKnown RBP25.87■■□□□ 1.73
HLA-B-255ENST00000498007 COL23A1Q86Y22 540 aaPredicted RBP25.87■■□□□ 1.73
HLA-B-255ENST00000498007 LRP5O75197 1615 aa25.86■■□□□ 1.73
HLA-B-255ENST00000498007 PRAMEF22A3QJZ6 481 aa25.86■■□□□ 1.73
HLA-B-255ENST00000498007 SSFA2P28290 1259 aa25.86■■□□□ 1.73
HLA-B-255ENST00000498007 CCDC87Q9NVE4 849 aa25.86■■□□□ 1.73
HLA-B-255ENST00000498007 RTCBQ9Y3I0 505 aaKnown RBP25.86■■□□□ 1.73
HLA-B-255ENST00000498007 C4AP0C0L4 1744 aa25.85■■□□□ 1.73
HLA-B-255ENST00000498007 STARD3NLO95772 234 aa25.85■■□□□ 1.73
HLA-B-255ENST00000498007 CALD1Q05682 793 aaKnown RBP25.85■■□□□ 1.73
HLA-B-255ENST00000498007 FLAD1Q8NFF5 587 aa25.85■■□□□ 1.73
HLA-B-255ENST00000498007 SNRPA1P09661 255 aaKnown RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms