RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ARXQ96QS3 562 aa20.57■□□□□ 0.88
NUP50-219ENST00000497960 NUDCQ9Y266 331 aa20.57■□□□□ 0.88
NUP50-219ENST00000497960 C5P01031 1676 aa20.57■□□□□ 0.88
NUP50-219ENST00000497960 DCAF8L1A6NGE4 600 aa20.56■□□□□ 0.88
NUP50-219ENST00000497960 RBM42Q9BTD8 480 aaKnown RBP20.56■□□□□ 0.88
NUP50-219ENST00000497960 MTHFSDQ2M296 383 aaKnown RBP20.55■□□□□ 0.88
NUP50-219ENST00000497960 NFATC2IPQ8NCF5 419 aa20.55■□□□□ 0.88
NUP50-219ENST00000497960 ITPK1Q13572 414 aa20.54■□□□□ 0.88
NUP50-219ENST00000497960 LINC00116Q8NCU8 138 aa20.54■□□□□ 0.88
NUP50-219ENST00000497960 TAF1LQ8IZX4 1826 aa20.53■□□□□ 0.88
NUP50-219ENST00000497960 TUBGCP6Q96RT7 1819 aa20.53■□□□□ 0.88
NUP50-219ENST00000497960 FHDC1Q9C0D6 1143 aaPredicted RBP20.53■□□□□ 0.88
NUP50-219ENST00000497960 C4BP0C0L5 1744 aa20.53■□□□□ 0.88
NUP50-219ENST00000497960 RNMTO43148 476 aaKnown RBP20.52■□□□□ 0.88
NUP50-219ENST00000497960 GAS2L2Q8NHY3 880 aa20.52■□□□□ 0.88
NUP50-219ENST00000497960 SYT17Q9BSW7 474 aa20.52■□□□□ 0.88
NUP50-219ENST00000497960 PHF14O94880 888 aa20.51■□□□□ 0.87
NUP50-219ENST00000497960 DDX10Q13206 875 aaKnown RBP20.51■□□□□ 0.87
NUP50-219ENST00000497960 SLC52A2Q9HAB3 445 aa20.51■□□□□ 0.87
NUP50-219ENST00000497960 LGR6Q9HBX8 967 aa20.51■□□□□ 0.87
NUP50-219ENST00000497960 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.5■□□□□ 0.87
NUP50-219ENST00000497960 GNPATO15228 680 aa20.5■□□□□ 0.87
NUP50-219ENST00000497960 PTCD1O75127 700 aaKnown RBP20.5■□□□□ 0.87
NUP50-219ENST00000497960 U2AF1L5P0DN76 240 aaPredicted RBP20.5■□□□□ 0.87
NUP50-219ENST00000497960 SSFA2P28290 1259 aa20.5■□□□□ 0.87
NUP50-219ENST00000497960 U2AF1Q01081 240 aaKnown RBP eCLIP20.5■□□□□ 0.87
NUP50-219ENST00000497960 PRKAR2BP31323 418 aa20.49■□□□□ 0.87
NUP50-219ENST00000497960 MSL1Q68DK7 614 aa20.49■□□□□ 0.87
NUP50-219ENST00000497960 SLC4A9Q96Q91 983 aa20.49■□□□□ 0.87
NUP50-219ENST00000497960 KLHL34Q8N239 644 aa20.48■□□□□ 0.87
NUP50-219ENST00000497960 SCN11AQ9UI33 1791 aa20.48■□□□□ 0.87
NUP50-219ENST00000497960 GNAT3A8MTJ3 354 aa20.47■□□□□ 0.87
NUP50-219ENST00000497960 AMIGO3Q86WK7 504 aa20.47■□□□□ 0.87
NUP50-219ENST00000497960 RSPH6AQ9H0K4 717 aa20.47■□□□□ 0.87
NUP50-219ENST00000497960 MAP3K5Q99683 1374 aa20.46■□□□□ 0.87
NUP50-219ENST00000497960 RC3H1Q5TC82 1133 aaKnown RBP20.46■□□□□ 0.87
NUP50-219ENST00000497960 SMIM5Q71RC9 77 aa20.46■□□□□ 0.87
NUP50-219ENST00000497960 RTCBQ9Y3I0 505 aaKnown RBP20.46■□□□□ 0.87
NUP50-219ENST00000497960 FCHSD2O94868 740 aa20.45■□□□□ 0.86
NUP50-219ENST00000497960 CNTNAP4Q9C0A0 1308 aa20.45■□□□□ 0.86
NUP50-219ENST00000497960 UBR3Q6ZT12 1888 aa20.44■□□□□ 0.86
NUP50-219ENST00000497960 TRAPPC3LQ5T215 181 aa20.44■□□□□ 0.86
NUP50-219ENST00000497960 PHACTR3Q96KR7 559 aa20.44■□□□□ 0.86
NUP50-219ENST00000497960 ZNF831Q5JPB2 1677 aa20.44■□□□□ 0.86
NUP50-219ENST00000497960 MRC1P22897 1456 aa20.43■□□□□ 0.86
NUP50-219ENST00000497960 TEFQ10587 303 aa20.43■□□□□ 0.86
NUP50-219ENST00000497960 SLC39A6Q13433 755 aa20.43■□□□□ 0.86
NUP50-219ENST00000497960 RALBP1Q15311 655 aa20.43■□□□□ 0.86
NUP50-219ENST00000497960 COL24A1Q17RW2 1714 aa20.43■□□□□ 0.86
NUP50-219ENST00000497960 ADRA2BP18089 450 aa20.42■□□□□ 0.86
NUP50-219ENST00000497960 RPS6KA4O75676 772 aa20.41■□□□□ 0.86
NUP50-219ENST00000497960 IL17REQ8NFR9 667 aa20.41■□□□□ 0.86
NUP50-219ENST00000497960 NEFMP07197 916 aa20.4■□□□□ 0.86
NUP50-219ENST00000497960 CRKLP46109 303 aaKnown RBP20.4■□□□□ 0.86
NUP50-219ENST00000497960 TTC5Q8N0Z6 440 aa20.4■□□□□ 0.86
NUP50-219ENST00000497960 ADAMTS7Q9UKP4 1686 aa20.39■□□□□ 0.86
NUP50-219ENST00000497960 RTF1Q92541 710 aaKnown RBP20.39■□□□□ 0.85
NUP50-219ENST00000497960 RFC4P35249 363 aa20.38■□□□□ 0.85
NUP50-219ENST00000497960 DNAJC10Q8IXB1 793 aa20.38■□□□□ 0.85
NUP50-219ENST00000497960 ARHGEF1Q92888 912 aaKnown RBP20.38■□□□□ 0.85
NUP50-219ENST00000497960 VSIG10Q8N0Z9 540 aa20.37■□□□□ 0.85
NUP50-219ENST00000497960 VIRMAQ69YN4 1812 aaKnown RBP20.37■□□□□ 0.85
NUP50-219ENST00000497960 COL5A3P25940 1745 aaPredicted RBP20.36■□□□□ 0.85
NUP50-219ENST00000497960 NLGN1Q8N2Q7 840 aa20.36■□□□□ 0.85
NUP50-219ENST00000497960 PNNQ9H307 717 aaKnown RBP20.36■□□□□ 0.85
NUP50-219ENST00000497960 CD2APQ9Y5K6 639 aa20.36■□□□□ 0.85
NUP50-219ENST00000497960 CEMIPQ8WUJ3 1361 aa20.35■□□□□ 0.85
NUP50-219ENST00000497960 GPR162Q16538 588 aa20.35■□□□□ 0.85
NUP50-219ENST00000497960 INTS5Q6P9B9 1019 aaKnown RBP20.35■□□□□ 0.85
NUP50-219ENST00000497960 ZNF790Q6PG37 636 aa20.35■□□□□ 0.85
NUP50-219ENST00000497960 NLGN2Q8NFZ4 835 aa20.35■□□□□ 0.85
NUP50-219ENST00000497960 CCDC87Q9NVE4 849 aa20.35■□□□□ 0.85
NUP50-219ENST00000497960 MYH14Q7Z406 1995 aaKnown RBP20.35■□□□□ 0.85
NUP50-219ENST00000497960 HTATSF1O43719 755 aaKnown RBP20.34■□□□□ 0.85
NUP50-219ENST00000497960 CYP19A1P11511 503 aaPredicted RBP20.34■□□□□ 0.85
NUP50-219ENST00000497960 KCPQ6ZWJ8 1503 aa20.33■□□□□ 0.85
NUP50-219ENST00000497960 MMP10P09238 476 aa20.33■□□□□ 0.85
NUP50-219ENST00000497960 YY1P25490 414 aa20.33■□□□□ 0.85
NUP50-219ENST00000497960 PELP1Q8IZL8 1130 aaKnown RBP20.33■□□□□ 0.85
NUP50-219ENST00000497960 TJP1Q07157 1748 aa20.33■□□□□ 0.84
NUP50-219ENST00000497960 MYBBP1AQ9BQG0 1328 aaKnown RBP20.32■□□□□ 0.84
NUP50-219ENST00000497960 CICQ96RK0 1608 aaPredicted RBP20.32■□□□□ 0.84
NUP50-219ENST00000497960 BTBD11A6QL63 1104 aa20.32■□□□□ 0.84
NUP50-219ENST00000497960 STARD3NLO95772 234 aa20.32■□□□□ 0.84
NUP50-219ENST00000497960 MCM10Q7L590 875 aa20.32■□□□□ 0.84
NUP50-219ENST00000497960 ZNF496Q96IT1 587 aaPredicted RBP20.32■□□□□ 0.84
NUP50-219ENST00000497960 GYS1P13807 737 aa20.31■□□□□ 0.84
NUP50-219ENST00000497960 FMNL2Q96PY5 1086 aa20.31■□□□□ 0.84
NUP50-219ENST00000497960 TEX13AQ9BXU3 409 aaPredicted RBP20.31■□□□□ 0.84
NUP50-219ENST00000497960 MAPK8IP3Q9UPT6 1336 aa20.3■□□□□ 0.84
NUP50-219ENST00000497960 HEG1Q9ULI3 1381 aa20.3■□□□□ 0.84
NUP50-219ENST00000497960 SOS1Q07889 1333 aaPredicted RBP20.29■□□□□ 0.84
NUP50-219ENST00000497960 ZPR1O75312 459 aa20.29■□□□□ 0.84
NUP50-219ENST00000497960 DCTN1Q14203 1278 aa20.29■□□□□ 0.84
NUP50-219ENST00000497960 PLEKHF1Q96S99 279 aa20.29■□□□□ 0.84
NUP50-219ENST00000497960 USP42Q9H9J4 1324 aaKnown RBP20.28■□□□□ 0.84
NUP50-219ENST00000497960 SRP68Q9UHB9 627 aaKnown RBP20.28■□□□□ 0.84
NUP50-219ENST00000497960 ZBTB1Q9Y2K1 713 aa20.28■□□□□ 0.84
NUP50-219ENST00000497960 PARP3Q9Y6F1 533 aa20.28■□□□□ 0.84
NUP50-219ENST00000497960 UBR2Q8IWV8 1755 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms