RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 FAM187AA6NFU0 413 aa12.6□□□□□ -0.39
GARNL3-221ENST00000497703 MEN1O00255 615 aa12.6□□□□□ -0.39
GARNL3-221ENST00000497703 SSFA2P28290 1259 aa12.6□□□□□ -0.39
GARNL3-221ENST00000497703 CCER1Q8TC90 406 aaPredicted RBP12.6□□□□□ -0.39
GARNL3-221ENST00000497703 ESYT1Q9BSJ8 1104 aa12.6□□□□□ -0.39
GARNL3-221ENST00000497703 TSEN34Q9BSV6 310 aaKnown RBP12.6□□□□□ -0.39
GARNL3-221ENST00000497703 A0A1W2PRU2 124 aa12.59□□□□□ -0.39
GARNL3-221ENST00000497703 ARID4AP29374 1257 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-221ENST00000497703 CLN3Q13286 438 aa12.59□□□□□ -0.39
GARNL3-221ENST00000497703 TLR1Q15399 786 aa12.59□□□□□ -0.39
GARNL3-221ENST00000497703 MEIOBQ8N635 442 aa12.59□□□□□ -0.39
GARNL3-221ENST00000497703 SLC4A9Q96Q91 983 aa12.59□□□□□ -0.39
GARNL3-221ENST00000497703 CHMP3Q9Y3E7 222 aa12.59□□□□□ -0.39
GARNL3-221ENST00000497703 STAU1O95793 577 aaKnown RBP12.58□□□□□ -0.4
GARNL3-221ENST00000497703 SMTNP53814 917 aa12.58□□□□□ -0.4
GARNL3-221ENST00000497703 NBPF15Q8N660 670 aa12.58□□□□□ -0.4
GARNL3-221ENST00000497703 XAGE2Q96GT9 111 aa12.58□□□□□ -0.4
GARNL3-221ENST00000497703 PRIMPOLQ96LW4 560 aa12.58□□□□□ -0.4
GARNL3-221ENST00000497703 AGBL1Q96MI9 1066 aa12.58□□□□□ -0.4
GARNL3-221ENST00000497703 A6NJY4 79 aa12.57□□□□□ -0.4
GARNL3-221ENST00000497703 TNS4Q8IZW8 715 aa12.57□□□□□ -0.4
GARNL3-221ENST00000497703 VTI1AQ96AJ9 217 aa12.57□□□□□ -0.4
GARNL3-221ENST00000497703 IL2RAP01589 272 aa12.56□□□□□ -0.4
GARNL3-221ENST00000497703 PKDCCQ504Y2 493 aa12.56□□□□□ -0.4
GARNL3-221ENST00000497703 GAS2L2Q8NHY3 880 aa12.56□□□□□ -0.4
GARNL3-221ENST00000497703 C1orf216Q8TAB5 229 aa12.56□□□□□ -0.4
GARNL3-221ENST00000497703 PODXL2Q9NZ53 605 aa12.56□□□□□ -0.4
GARNL3-221ENST00000497703 CXXC1Q9P0U4 656 aaPredicted RBP12.56□□□□□ -0.4
GARNL3-221ENST00000497703 IGFBP4P22692 258 aa12.55□□□□□ -0.4
GARNL3-221ENST00000497703 WEE1P30291 646 aa12.55□□□□□ -0.4
GARNL3-221ENST00000497703 SCG3Q8WXD2 468 aaKnown RBP12.55□□□□□ -0.4
GARNL3-221ENST00000497703 ZNF395Q9H8N7 513 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-221ENST00000497703 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.55□□□□□ -0.4
GARNL3-221ENST00000497703 LGR5O75473 907 aa12.54□□□□□ -0.4
GARNL3-221ENST00000497703 IVNS1ABPQ9Y6Y0 642 aa12.54□□□□□ -0.4
GARNL3-221ENST00000497703 PTCD1O75127 700 aaKnown RBP12.53□□□□□ -0.4
GARNL3-221ENST00000497703 OCLNQ16625 522 aa12.53□□□□□ -0.4
GARNL3-221ENST00000497703 LINC00528Q8N1L1 170 aa12.53□□□□□ -0.4
GARNL3-221ENST00000497703 CHMP7Q8WUX9 453 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-221ENST00000497703 SCHIP1Q9P0W5 487 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-221ENST00000497703 CDK2AP1O14519 115 aa12.52□□□□□ -0.41
GARNL3-221ENST00000497703 FOXO3O43524 673 aa12.52□□□□□ -0.41
GARNL3-221ENST00000497703 PPP1R12BO60237 982 aaPredicted RBP12.52□□□□□ -0.41
GARNL3-221ENST00000497703 GFRA3O60609 400 aa12.52□□□□□ -0.41
GARNL3-221ENST00000497703 CENPCQ03188 943 aa12.52□□□□□ -0.41
GARNL3-221ENST00000497703 LAPTM4AQ15012 233 aa12.52□□□□□ -0.41
GARNL3-221ENST00000497703 SLC27A3Q5K4L6 730 aa12.52□□□□□ -0.41
GARNL3-221ENST00000497703 SLC9A9Q8IVB4 645 aa12.52□□□□□ -0.41
GARNL3-221ENST00000497703 ZSCAN10Q96SZ4 725 aaPredicted RBP12.52□□□□□ -0.41
GARNL3-221ENST00000497703 TSPAN10Q9H1Z9 355 aaPredicted RBP12.52□□□□□ -0.41
GARNL3-221ENST00000497703 SLAIN2Q9P270 581 aa12.52□□□□□ -0.41
GARNL3-221ENST00000497703 ATAD2Q6PL18 1390 aa12.52□□□□□ -0.41
GARNL3-221ENST00000497703 NRG2O14511 850 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-221ENST00000497703 DGAT1O75907 488 aa12.51□□□□□ -0.41
GARNL3-221ENST00000497703 BMP2P12643 396 aa12.51□□□□□ -0.41
GARNL3-221ENST00000497703 SCARF1Q14162 830 aa12.51□□□□□ -0.41
GARNL3-221ENST00000497703 MTFR1Q15390 333 aa12.51□□□□□ -0.41
GARNL3-221ENST00000497703 CTC1Q2NKJ3 1217 aa12.51□□□□□ -0.41
GARNL3-221ENST00000497703 TMEM214Q6NUQ4 689 aaKnown RBP12.51□□□□□ -0.41
GARNL3-221ENST00000497703 KDF1Q8NAX2 398 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-221ENST00000497703 POLMQ9NP87 494 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-221ENST00000497703 GNEQ9Y223 722 aaKnown RBP12.51□□□□□ -0.41
GARNL3-221ENST00000497703 GPC1P35052 558 aa12.5□□□□□ -0.41
GARNL3-221ENST00000497703 EPHA4P54764 986 aa12.5□□□□□ -0.41
GARNL3-221ENST00000497703 PSMA6P60900 246 aaKnown RBP12.5□□□□□ -0.41
GARNL3-221ENST00000497703 PHLDB3Q6NSJ2 640 aa12.5□□□□□ -0.41
GARNL3-221ENST00000497703 GZF1Q9H116 711 aaPredicted RBP12.5□□□□□ -0.41
GARNL3-221ENST00000497703 GNASQ5JWF2 1037 aa12.49□□□□□ -0.41
GARNL3-221ENST00000497703 SPINT1O43278 529 aa12.48□□□□□ -0.41
GARNL3-221ENST00000497703 AVPP01185 164 aa12.48□□□□□ -0.41
GARNL3-221ENST00000497703 TAS1R3Q7RTX0 852 aa12.48□□□□□ -0.41
GARNL3-221ENST00000497703 INSM2Q96T92 566 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-221ENST00000497703 MKNK1Q9BUB5 465 aa12.48□□□□□ -0.41
GARNL3-221ENST00000497703 FOXK2Q01167 660 aa12.47□□□□□ -0.41
GARNL3-221ENST00000497703 FKBP5Q13451 457 aaPredicted RBP12.47□□□□□ -0.41
GARNL3-221ENST00000497703 C6orf118Q5T5N4 469 aa12.47□□□□□ -0.41
GARNL3-221ENST00000497703 MRPL14Q6P1L8 145 aaKnown RBP12.47□□□□□ -0.41
GARNL3-221ENST00000497703 CABP1Q9NZU7 370 aa12.47□□□□□ -0.41
GARNL3-221ENST00000497703 ZNF232Q9UNY5 417 aa12.47□□□□□ -0.41
GARNL3-221ENST00000497703 HRH3Q9Y5N1 445 aa12.47□□□□□ -0.41
GARNL3-221ENST00000497703 TBCELQ5QJ74 424 aa12.46□□□□□ -0.41
GARNL3-221ENST00000497703 TXNDC2Q86VQ3 553 aa12.46□□□□□ -0.41
GARNL3-221ENST00000497703 STAG2Q8N3U4 1231 aa12.46□□□□□ -0.41
GARNL3-221ENST00000497703 COL26A1Q96A83 441 aa12.46□□□□□ -0.41
GARNL3-221ENST00000497703 NIFKQ9BYG3 293 aaKnown RBP12.46□□□□□ -0.41
GARNL3-221ENST00000497703 CCDC9Q9Y3X0 531 aaKnown RBP12.46□□□□□ -0.41
GARNL3-221ENST00000497703 AXIN1O15169 862 aa12.45□□□□□ -0.42
GARNL3-221ENST00000497703 RNF144AP50876 292 aaPredicted RBP12.45□□□□□ -0.42
GARNL3-221ENST00000497703 TMCO4Q5TGY1 634 aa12.45□□□□□ -0.42
GARNL3-221ENST00000497703 PPARGC1BQ86YN6 1023 aaKnown RBP12.45□□□□□ -0.42
GARNL3-221ENST00000497703 FHDC1Q9C0D6 1143 aaPredicted RBP12.45□□□□□ -0.42
GARNL3-221ENST00000497703 SERTM1A2A2V5 107 aa12.44□□□□□ -0.42
GARNL3-221ENST00000497703 ABL1P00519 1130 aa12.44□□□□□ -0.42
GARNL3-221ENST00000497703 RHBDD1Q8TEB9 315 aa12.44□□□□□ -0.42
GARNL3-221ENST00000497703 SMCPP49901 116 aaPredicted RBP12.43□□□□□ -0.42
GARNL3-221ENST00000497703 C21orf2O43822 256 aa12.42□□□□□ -0.42
GARNL3-221ENST00000497703 C2orf49Q9BVC5 232 aaPredicted RBP12.42□□□□□ -0.42
GARNL3-221ENST00000497703 IQSEC3Q9UPP2 1182 aaPredicted RBP12.42□□□□□ -0.42
GARNL3-221ENST00000497703 TEAD4Q15561 434 aa12.41□□□□□ -0.42
GARNL3-221ENST00000497703 PURBQ96QR8 312 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms