RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 ZC3H4Q9UPT8 1303 aaKnown RBP20.73■□□□□ 0.91
RNF220-218ENST00000497469 KDM6AO15550 1401 aaPredicted RBP20.72■□□□□ 0.91
RNF220-218ENST00000497469 HMGB2P26583 209 aaKnown RBP20.72■□□□□ 0.91
RNF220-218ENST00000497469 NME9Q86XW9 330 aa20.72■□□□□ 0.91
RNF220-218ENST00000497469 ZNF692Q9BU19 519 aaPredicted RBP20.71■□□□□ 0.91
RNF220-218ENST00000497469 KTN1Q86UP2 1357 aaKnown RBP20.71■□□□□ 0.91
RNF220-218ENST00000497469 TMF1P82094 1093 aa20.7■□□□□ 0.9
RNF220-218ENST00000497469 LMNB1P20700 586 aa20.69■□□□□ 0.9
RNF220-218ENST00000497469 NBPF1Q3BBV0 1214 aa20.69■□□□□ 0.9
RNF220-218ENST00000497469 PARP3Q9Y6F1 533 aa20.69■□□□□ 0.9
RNF220-218ENST00000497469 RGPD2P0DJD1 1756 aa20.69■□□□□ 0.9
RNF220-218ENST00000497469 ITPK1Q13572 414 aa20.68■□□□□ 0.9
RNF220-218ENST00000497469 NLGN1Q8N2Q7 840 aa20.68■□□□□ 0.9
RNF220-218ENST00000497469 SMARCC1Q92922 1105 aaPredicted RBP20.67■□□□□ 0.9
RNF220-218ENST00000497469 MCOLN1Q9GZU1 580 aa20.67■□□□□ 0.9
RNF220-218ENST00000497469 TSKSQ9UJT2 592 aa20.67■□□□□ 0.9
RNF220-218ENST00000497469 USP31Q70CQ4 1352 aa20.67■□□□□ 0.9
RNF220-218ENST00000497469 LOC102724428A0A0B4J2F2 783 aa20.66■□□□□ 0.9
RNF220-218ENST00000497469 SIK1P57059 783 aa20.66■□□□□ 0.9
RNF220-218ENST00000497469 USHBP1Q8N6Y0 703 aa20.66■□□□□ 0.9
RNF220-218ENST00000497469 PASKQ96RG2 1323 aa20.66■□□□□ 0.9
RNF220-218ENST00000497469 MAP2P11137 1827 aaKnown RBP20.65■□□□□ 0.9
RNF220-218ENST00000497469 TMEM88BA6NKF7 163 aa20.65■□□□□ 0.9
RNF220-218ENST00000497469 IP6K1Q92551 441 aa20.65■□□□□ 0.9
RNF220-218ENST00000497469 MAP2K1Q02750 393 aaPredicted RBP20.64■□□□□ 0.89
RNF220-218ENST00000497469 PRPF38BQ5VTL8 546 aaKnown RBP20.64■□□□□ 0.89
RNF220-218ENST00000497469 GYS1P13807 737 aa20.63■□□□□ 0.89
RNF220-218ENST00000497469 PIGBQ92521 554 aa20.63■□□□□ 0.89
RNF220-218ENST00000497469 ITGB4P16144 1822 aa20.62■□□□□ 0.89
RNF220-218ENST00000497469 MON2Q7Z3U7 1717 aa20.62■□□□□ 0.89
RNF220-218ENST00000497469 TRAPPC3LQ5T215 181 aa20.62■□□□□ 0.89
RNF220-218ENST00000497469 WDR33Q9C0J8 1336 aaKnown RBP20.61■□□□□ 0.89
RNF220-218ENST00000497469 ATP6V1AP38606 617 aa20.6■□□□□ 0.89
RNF220-218ENST00000497469 EVC2Q86UK5 1308 aa20.59■□□□□ 0.89
RNF220-218ENST00000497469 SOX10P56693 466 aa20.59■□□□□ 0.89
RNF220-218ENST00000497469 DEFB115Q30KQ5 88 aa20.59■□□□□ 0.89
RNF220-218ENST00000497469 DPY19L2Q6NUT2 758 aa20.59■□□□□ 0.89
RNF220-218ENST00000497469 ARHGEF1Q92888 912 aaKnown RBP20.59■□□□□ 0.89
RNF220-218ENST00000497469 STAC3Q96MF2 364 aa20.59■□□□□ 0.89
RNF220-218ENST00000497469 RTCBQ9Y3I0 505 aaKnown RBP20.59■□□□□ 0.89
RNF220-218ENST00000497469 CCDC88AQ3V6T2 1871 aa20.58■□□□□ 0.89
RNF220-218ENST00000497469 PCDH11XQ9BZA7 1347 aa20.57■□□□□ 0.88
RNF220-218ENST00000497469 PCDH11YQ9BZA8 1340 aa20.57■□□□□ 0.88
RNF220-218ENST00000497469 RASSF10A6NK89 507 aa20.57■□□□□ 0.88
RNF220-218ENST00000497469 NFKBIEO00221 500 aa20.56■□□□□ 0.88
RNF220-218ENST00000497469 DDR1Q08345 913 aa20.56■□□□□ 0.88
RNF220-218ENST00000497469 CYP27B1O15528 508 aa20.55■□□□□ 0.88
RNF220-218ENST00000497469 GRM1Q13255 1194 aa20.55■□□□□ 0.88
RNF220-218ENST00000497469 NBPF6Q5VWK0 638 aa20.55■□□□□ 0.88
RNF220-218ENST00000497469 RAPGEF4Q8WZA2 1011 aa20.55■□□□□ 0.88
RNF220-218ENST00000497469 NBPF4Q96M43 638 aa20.55■□□□□ 0.88
RNF220-218ENST00000497469 BEGAINQ9BUH8 593 aa20.55■□□□□ 0.88
RNF220-218ENST00000497469 ASAP1Q9ULH1 1129 aa20.55■□□□□ 0.88
RNF220-218ENST00000497469 SBNO2Q9Y2G9 1366 aa20.55■□□□□ 0.88
RNF220-218ENST00000497469 DDNO94850 711 aaPredicted RBP20.54■□□□□ 0.88
RNF220-218ENST00000497469 FBLN1P23142 703 aa20.54■□□□□ 0.88
RNF220-218ENST00000497469 HOXC9P31274 260 aa20.54■□□□□ 0.88
RNF220-218ENST00000497469 RFC4P35249 363 aa20.54■□□□□ 0.88
RNF220-218ENST00000497469 DGKZQ13574 1117 aa20.54■□□□□ 0.88
RNF220-218ENST00000497469 ZNF219Q9P2Y4 722 aaPredicted RBP20.54■□□□□ 0.88
RNF220-218ENST00000497469 ITGBL1O95965 494 aaPredicted RBP20.53■□□□□ 0.88
RNF220-218ENST00000497469 TATP17735 454 aaPredicted RBP20.53■□□□□ 0.88
RNF220-218ENST00000497469 LDHDQ86WU2 507 aa20.53■□□□□ 0.88
RNF220-218ENST00000497469 ABT1Q9ULW3 272 aaKnown RBP20.53■□□□□ 0.88
RNF220-218ENST00000497469 SRP68Q9UHB9 627 aaKnown RBP20.52■□□□□ 0.88
RNF220-218ENST00000497469 LTBP1Q14766 1721 aa20.52■□□□□ 0.88
RNF220-218ENST00000497469 MAP3K19Q56UN5 1328 aa20.52■□□□□ 0.87
RNF220-218ENST00000497469 CD163L1Q9NR16 1453 aa20.51■□□□□ 0.87
RNF220-218ENST00000497469 PAXIP1Q6ZW49 1069 aaPredicted RBP20.51■□□□□ 0.87
RNF220-218ENST00000497469 THSD7BQ9C0I4 1608 aa20.51■□□□□ 0.87
RNF220-218ENST00000497469 CGNL1Q0VF96 1302 aa20.51■□□□□ 0.87
RNF220-218ENST00000497469 AMPHP49418 695 aa20.5■□□□□ 0.87
RNF220-218ENST00000497469 FKBP8Q14318 412 aa20.5■□□□□ 0.87
RNF220-218ENST00000497469 ERFEQ4G0M1 354 aa20.5■□□□□ 0.87
RNF220-218ENST00000497469 EAPPQ56P03 285 aaPredicted RBP20.49■□□□□ 0.87
RNF220-218ENST00000497469 ADRA2BP18089 450 aa20.47■□□□□ 0.87
RNF220-218ENST00000497469 CAPNS2Q96L46 248 aa20.47■□□□□ 0.87
RNF220-218ENST00000497469 CYP4F22Q6NT55 531 aa20.46■□□□□ 0.87
RNF220-218ENST00000497469 TAF1DQ9H5J8 278 aaPredicted RBP20.46■□□□□ 0.87
RNF220-218ENST00000497469 TMOD3Q9NYL9 352 aa20.46■□□□□ 0.87
RNF220-218ENST00000497469 CLEC11AQ9Y240 323 aa20.46■□□□□ 0.87
RNF220-218ENST00000497469 CASP8AP2Q9UKL3 1982 aa20.45■□□□□ 0.86
RNF220-218ENST00000497469 SLC4A9Q96Q91 983 aa20.45■□□□□ 0.86
RNF220-218ENST00000497469 POLRMTO00411 1230 aaKnown RBP20.44■□□□□ 0.86
RNF220-218ENST00000497469 GPR101Q96P66 508 aaPredicted RBP20.44■□□□□ 0.86
RNF220-218ENST00000497469 ATG3Q9NT62 314 aa20.44■□□□□ 0.86
RNF220-218ENST00000497469 KDRP35968 1356 aa20.44■□□□□ 0.86
RNF220-218ENST00000497469 AOC2O75106 756 aa20.43■□□□□ 0.86
RNF220-218ENST00000497469 MAP1SQ66K74 1059 aaPredicted RBP20.43■□□□□ 0.86
RNF220-218ENST00000497469 TTLL6Q8N841 843 aa20.43■□□□□ 0.86
RNF220-218ENST00000497469 RPS6KA4O75676 772 aa20.42■□□□□ 0.86
RNF220-218ENST00000497469 IQCA1LA6NCM1 817 aa20.41■□□□□ 0.86
RNF220-218ENST00000497469 RBM42Q9BTD8 480 aaKnown RBP20.41■□□□□ 0.86
RNF220-218ENST00000497469 EDC4Q6P2E9 1401 aaKnown RBP20.4■□□□□ 0.86
RNF220-218ENST00000497469 DLEC1Q9Y238 1755 aa20.4■□□□□ 0.86
RNF220-218ENST00000497469 DICER1Q9UPY3 1922 aaKnown RBP20.39■□□□□ 0.86
RNF220-218ENST00000497469 COL5A3P25940 1745 aaPredicted RBP20.39■□□□□ 0.86
RNF220-218ENST00000497469 CNTNAP4Q9C0A0 1308 aa20.39■□□□□ 0.85
RNF220-218ENST00000497469 USP42Q9H9J4 1324 aaKnown RBP20.39■□□□□ 0.85
RNF220-218ENST00000497469 FMR1Q06787 632 aaKnown RBP eCLIP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms