RNA–Protein interactions for RNA: ENST00000497382.5

VIT-208, Transcript of vitrin, humanhuman

TSL 1 (best) BASIC

Gene VIT, Length 2,650 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-208ENST00000497382 GAS2L2Q8NHY3 880 aa11.63□□□□□ -0.55
VIT-208ENST00000497382 UBR1Q8IWV7 1749 aa11.62□□□□□ -0.55
VIT-208ENST00000497382 TRDNQ13061 729 aa11.62□□□□□ -0.55
VIT-208ENST00000497382 SNRNP27Q8WVK2 155 aaKnown RBP11.62□□□□□ -0.55
VIT-208ENST00000497382 CCDC85AQ96PX6 553 aaPredicted RBP11.62□□□□□ -0.55
VIT-208ENST00000497382 NINLQ9Y2I6 1382 aa11.62□□□□□ -0.55
VIT-208ENST00000497382 RAD50Q92878 1312 aa11.62□□□□□ -0.55
VIT-208ENST00000497382 CDC37Q16543 378 aaPredicted RBP11.62□□□□□ -0.55
VIT-208ENST00000497382 B4GALNT3Q6L9W6 998 aa11.62□□□□□ -0.55
VIT-208ENST00000497382 WDR70Q9NW82 654 aa11.62□□□□□ -0.55
VIT-208ENST00000497382 PPP1R1BQ9UD71 204 aaPredicted RBP11.62□□□□□ -0.55
VIT-208ENST00000497382 NRBP1Q9UHY1 535 aa11.62□□□□□ -0.55
VIT-208ENST00000497382 ERICH4A6NGS2 130 aa11.61□□□□□ -0.55
VIT-208ENST00000497382 H0YHG0 523 aa11.61□□□□□ -0.55
VIT-208ENST00000497382 CSB-PGBD3P0DP91 1061 aa11.61□□□□□ -0.55
VIT-208ENST00000497382 MRE11P49959 708 aa11.61□□□□□ -0.55
VIT-208ENST00000497382 HMGN5P82970 282 aaKnown RBP11.61□□□□□ -0.55
VIT-208ENST00000497382 SARNPP82979 210 aaKnown RBP11.61□□□□□ -0.55
VIT-208ENST00000497382 IFNLR1Q8IU57 520 aaPredicted RBP11.61□□□□□ -0.55
VIT-208ENST00000497382 PDZRN3Q9UPQ7 1066 aa11.61□□□□□ -0.55
VIT-208ENST00000497382 DDX49Q9Y6V7 483 aaKnown RBP11.61□□□□□ -0.55
VIT-208ENST00000497382 BARGINQ6ZT62 677 aa11.61□□□□□ -0.55
VIT-208ENST00000497382 SMC5Q8IY18 1101 aa11.61□□□□□ -0.55
VIT-208ENST00000497382 ERVK-7P63135 1459 aa11.6□□□□□ -0.55
VIT-208ENST00000497382 CCDC141Q6ZP82 1450 aa11.6□□□□□ -0.55
VIT-208ENST00000497382 SKILP12757 684 aa11.6□□□□□ -0.55
VIT-208ENST00000497382 TNNT1P13805 278 aa11.6□□□□□ -0.55
VIT-208ENST00000497382 GYS2P54840 703 aa11.6□□□□□ -0.55
VIT-208ENST00000497382 KLHL23Q8NBE8 558 aa11.6□□□□□ -0.55
VIT-208ENST00000497382 EIF2AK4Q9P2K8 1649 aaKnown RBP11.6□□□□□ -0.55
VIT-208ENST00000497382 ROBO1Q9Y6N7 1651 aa11.6□□□□□ -0.55
VIT-208ENST00000497382 CAMSAP2Q08AD1 1489 aa11.6□□□□□ -0.55
VIT-208ENST00000497382 CLUAP1Q96AJ1 413 aa11.6□□□□□ -0.55
VIT-208ENST00000497382 CXorf56Q9H5V9 222 aa11.6□□□□□ -0.55
VIT-208ENST00000497382 TIAM1Q13009 1591 aa11.59□□□□□ -0.55
VIT-208ENST00000497382 ANKRD33BA6NCL7 494 aa11.59□□□□□ -0.55
VIT-208ENST00000497382 KIF3BO15066 747 aa11.59□□□□□ -0.55
VIT-208ENST00000497382 CAPN15O75808 1086 aa11.59□□□□□ -0.55
VIT-208ENST00000497382 PARNO95453 639 aaKnown RBP11.59□□□□□ -0.55
VIT-208ENST00000497382 IGHDP01880 384 aa11.59□□□□□ -0.55
VIT-208ENST00000497382 RSPH14Q9UHP6 348 aa11.59□□□□□ -0.55
VIT-208ENST00000497382 R3HCC1Q9Y3T6 440 aaKnown RBP11.59□□□□□ -0.55
VIT-208ENST00000497382 KDM5AP29375 1690 aaKnown RBP11.59□□□□□ -0.55
VIT-208ENST00000497382 GABBR1Q9UBS5 961 aa11.59□□□□□ -0.55
VIT-208ENST00000497382 CDK12Q9NYV4 1490 aaPredicted RBP11.59□□□□□ -0.55
VIT-208ENST00000497382 ABCC3O15438 1527 aa11.58□□□□□ -0.55
VIT-208ENST00000497382 TNPO1Q92973 898 aaKnown RBP11.58□□□□□ -0.56
VIT-208ENST00000497382 CDCA7Q9BWT1 371 aaPredicted RBP11.58□□□□□ -0.56
VIT-208ENST00000497382 POGKQ9P215 609 aa11.58□□□□□ -0.56
VIT-208ENST00000497382 ISY1Q9ULR0 285 aaKnown RBP11.58□□□□□ -0.56
VIT-208ENST00000497382 SYNRGQ9UMZ2 1314 aa11.58□□□□□ -0.56
VIT-208ENST00000497382 JCADQ9P266 1359 aa11.58□□□□□ -0.56
VIT-208ENST00000497382 WDHD1O75717 1129 aaPredicted RBP11.58□□□□□ -0.56
VIT-208ENST00000497382 GPATCH3Q96I76 525 aa11.58□□□□□ -0.56
VIT-208ENST00000497382 EHBP1L1Q8N3D4 1523 aa11.58□□□□□ -0.56
VIT-208ENST00000497382 NAT2P11245 290 aa11.57□□□□□ -0.56
VIT-208ENST00000497382 ARHGEF5Q12774 1597 aa11.57□□□□□ -0.56
VIT-208ENST00000497382 CCDC196A0A1B0GTZ2 297 aa11.57□□□□□ -0.56
VIT-208ENST00000497382 HMGB1P1B2RPK0 211 aaPredicted RBP11.57□□□□□ -0.56
VIT-208ENST00000497382 FAM184AQ8NB25 1140 aa11.57□□□□□ -0.56
VIT-208ENST00000497382 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
VIT-208ENST00000497382 TEX13AQ9BXU3 409 aaPredicted RBP11.57□□□□□ -0.56
VIT-208ENST00000497382 C22orf23Q9BZE7 217 aa11.57□□□□□ -0.56
VIT-208ENST00000497382 NKTRP30414 1462 aaKnown RBP11.57□□□□□ -0.56
VIT-208ENST00000497382 HSP90AB2PQ58FF8 381 aa11.56□□□□□ -0.56
VIT-208ENST00000497382 GNL3LQ9NVN8 582 aaKnown RBP11.56□□□□□ -0.56
VIT-208ENST00000497382 FGD6Q6ZV73 1430 aa11.56□□□□□ -0.56
VIT-208ENST00000497382 NCOA2Q15596 1464 aa11.56□□□□□ -0.56
VIT-208ENST00000497382 PHLPP1O60346 1717 aa11.56□□□□□ -0.56
VIT-208ENST00000497382 C11orf96Q7Z7L8 435 aa11.56□□□□□ -0.56
VIT-208ENST00000497382 TTC30AQ86WT1 665 aa11.56□□□□□ -0.56
VIT-208ENST00000497382 LARP6Q9BRS8 491 aaKnown RBP11.56□□□□□ -0.56
VIT-208ENST00000497382 AMOTL2Q9Y2J4 779 aa11.56□□□□□ -0.56
VIT-208ENST00000497382 MAP3K1Q13233 1512 aa11.56□□□□□ -0.56
VIT-208ENST00000497382 NWD1Q149M9 1564 aa11.56□□□□□ -0.56
VIT-208ENST00000497382 COPB2P35606 906 aa11.55□□□□□ -0.56
VIT-208ENST00000497382 SF3B2Q13435 895 aaKnown RBP11.55□□□□□ -0.56
VIT-208ENST00000497382 CCDC91Q7Z6B0 441 aa11.55□□□□□ -0.56
VIT-208ENST00000497382 ZSCAN30Q86W11 494 aa11.55□□□□□ -0.56
VIT-208ENST00000497382 CFAP69A5D8W1 941 aa11.55□□□□□ -0.56
VIT-208ENST00000497382 SETSIPP0DME0 302 aa11.55□□□□□ -0.56
VIT-208ENST00000497382 FLT3P36888 993 aa11.55□□□□□ -0.56
VIT-208ENST00000497382 ZNF772Q68DY9 489 aaPredicted RBP11.55□□□□□ -0.56
VIT-208ENST00000497382 AMOTL1Q8IY63 956 aa11.55□□□□□ -0.56
VIT-208ENST00000497382 OGFOD1Q8N543 542 aa11.55□□□□□ -0.56
VIT-208ENST00000497382 PANK2Q9BZ23 570 aa11.55□□□□□ -0.56
VIT-208ENST00000497382 MAST1Q9Y2H9 1570 aa11.54□□□□□ -0.56
VIT-208ENST00000497382 MTUS2Q5JR59 1369 aa11.54□□□□□ -0.56
VIT-208ENST00000497382 U2AF1L5P0DN76 240 aaPredicted RBP11.54□□□□□ -0.56
VIT-208ENST00000497382 U2AF1Q01081 240 aaKnown RBP eCLIP11.54□□□□□ -0.56
VIT-208ENST00000497382 ATP2B3Q16720 1220 aa11.54□□□□□ -0.56
VIT-208ENST00000497382 CWC25Q9NXE8 425 aaPredicted RBP11.54□□□□□ -0.56
VIT-208ENST00000497382 SPATA31A6Q5VVP1 1343 aa11.54□□□□□ -0.56
VIT-208ENST00000497382 CCP110O43303 1012 aa11.54□□□□□ -0.56
VIT-208ENST00000497382 ZSCAN26Q16670 478 aa11.54□□□□□ -0.56
VIT-208ENST00000497382 TBC1D22AQ8WUA7 517 aa11.54□□□□□ -0.56
VIT-208ENST00000497382 ABCF2Q9UG63 623 aa11.54□□□□□ -0.56
VIT-208ENST00000497382 SUN2Q9UH99 717 aa11.54□□□□□ -0.56
VIT-208ENST00000497382 ARHGAP31Q2M1Z3 1444 aa11.54□□□□□ -0.56
VIT-208ENST00000497382 GSCP56915 257 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms