RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 NUP188Q5SRE5 1749 aa15.36■□□□□ 0.05
HLA-B-254ENST00000497377 HMOX1P09601 288 aa15.35■□□□□ 0.05
HLA-B-254ENST00000497377 C1orf141Q5JVX7 400 aa15.35■□□□□ 0.05
HLA-B-254ENST00000497377 ZNF530Q6P9A1 599 aaPredicted RBP15.35■□□□□ 0.05
HLA-B-254ENST00000497377 ITGB4P16144 1822 aa15.34■□□□□ 0.05
HLA-B-254ENST00000497377 NBPF14Q5TI25 921 aa15.34■□□□□ 0.05
HLA-B-254ENST00000497377 DCAF5Q96JK2 942 aa15.34■□□□□ 0.05
HLA-B-254ENST00000497377 TOGARAM1Q9Y4F4 1720 aa15.34■□□□□ 0.05
HLA-B-254ENST00000497377 TXNRD1Q16881 649 aa15.33■□□□□ 0.04
HLA-B-254ENST00000497377 MYBBP1AQ9BQG0 1328 aaKnown RBP15.33■□□□□ 0.04
HLA-B-254ENST00000497377 CD44P16070 742 aaKnown RBP15.32■□□□□ 0.04
HLA-B-254ENST00000497377 HMGB2P26583 209 aaKnown RBP15.32■□□□□ 0.04
HLA-B-254ENST00000497377 ERVV-2B6SEH9 535 aa15.31■□□□□ 0.04
HLA-B-254ENST00000497377 U2AF1L5P0DN76 240 aaPredicted RBP15.31■□□□□ 0.04
HLA-B-254ENST00000497377 U2AF1Q01081 240 aaKnown RBP eCLIP15.31■□□□□ 0.04
HLA-B-254ENST00000497377 AKAP4Q5JQC9 854 aa15.31■□□□□ 0.04
HLA-B-254ENST00000497377 SLC27A3Q5K4L6 730 aa15.31■□□□□ 0.04
HLA-B-254ENST00000497377 PROM2Q8N271 834 aa15.31■□□□□ 0.04
HLA-B-254ENST00000497377 LY75O60449 1722 aa15.31■□□□□ 0.04
HLA-B-254ENST00000497377 FCHSD2O94868 740 aa15.3■□□□□ 0.04
HLA-B-254ENST00000497377 MPRIPQ6WCQ1 1025 aa15.3■□□□□ 0.04
HLA-B-254ENST00000497377 SMARCC1Q92922 1105 aaPredicted RBP15.3■□□□□ 0.04
HLA-B-254ENST00000497377 TMOD3Q9NYL9 352 aa15.3■□□□□ 0.04
HLA-B-254ENST00000497377 GABBR2O75899 941 aa15.29■□□□□ 0.04
HLA-B-254ENST00000497377 GAS2L2Q8NHY3 880 aa15.29■□□□□ 0.04
HLA-B-254ENST00000497377 RSPH6AQ9H0K4 717 aa15.29■□□□□ 0.04
HLA-B-254ENST00000497377 PRKRIP1Q9H875 184 aaPredicted RBP15.29■□□□□ 0.04
HLA-B-254ENST00000497377 CREBZFQ9NS37 354 aa15.29■□□□□ 0.04
HLA-B-254ENST00000497377 SCN11AQ9UI33 1791 aa15.29■□□□□ 0.04
HLA-B-254ENST00000497377 KDM6AO15550 1401 aaPredicted RBP15.28■□□□□ 0.04
HLA-B-254ENST00000497377 PIGBQ92521 554 aa15.28■□□□□ 0.04
HLA-B-254ENST00000497377 PRKAR2BP31323 418 aa15.27■□□□□ 0.04
HLA-B-254ENST00000497377 MTHFSDQ2M296 383 aaKnown RBP15.27■□□□□ 0.04
HLA-B-254ENST00000497377 PNNQ9H307 717 aaKnown RBP15.27■□□□□ 0.04
HLA-B-254ENST00000497377 PALLDQ8WX93 1383 aa15.26■□□□□ 0.03
HLA-B-254ENST00000497377 NEFMP07197 916 aa15.26■□□□□ 0.03
HLA-B-254ENST00000497377 CABP4P57796 275 aa15.26■□□□□ 0.03
HLA-B-254ENST00000497377 R3HDM1Q15032 1099 aaKnown RBP15.26■□□□□ 0.03
HLA-B-254ENST00000497377 ADAMTS7Q9UKP4 1686 aa15.25■□□□□ 0.03
HLA-B-254ENST00000497377 PAPPAQ13219 1627 aa15.25■□□□□ 0.03
HLA-B-254ENST00000497377 VIRMAQ69YN4 1812 aaKnown RBP15.25■□□□□ 0.03
HLA-B-254ENST00000497377 STK32BQ9NY57 414 aa15.25■□□□□ 0.03
HLA-B-254ENST00000497377 CCNL1Q9UK58 526 aaPredicted RBP15.25■□□□□ 0.03
HLA-B-254ENST00000497377 MAP3K5Q99683 1374 aa15.24■□□□□ 0.03
HLA-B-254ENST00000497377 PSDA5PKW4 1024 aaPredicted RBP15.24■□□□□ 0.03
HLA-B-254ENST00000497377 GNAT3A8MTJ3 354 aa15.24■□□□□ 0.03
HLA-B-254ENST00000497377 LRRC4BQ9NT99 713 aa15.24■□□□□ 0.03
HLA-B-254ENST00000497377 MRC1P22897 1456 aa15.23■□□□□ 0.03
HLA-B-254ENST00000497377 RNMTO43148 476 aaKnown RBP15.23■□□□□ 0.03
HLA-B-254ENST00000497377 SLC15A2Q16348 729 aa15.23■□□□□ 0.03
HLA-B-254ENST00000497377 ANO8Q9HCE9 1232 aaPredicted RBP15.23■□□□□ 0.03
HLA-B-254ENST00000497377 PHACTR3Q96KR7 559 aa15.22■□□□□ 0.03
HLA-B-254ENST00000497377 SLC52A2Q9HAB3 445 aa15.22■□□□□ 0.03
HLA-B-254ENST00000497377 ATG3Q9NT62 314 aa15.22■□□□□ 0.03
HLA-B-254ENST00000497377 ASAP1Q9ULH1 1129 aa15.22■□□□□ 0.03
HLA-B-254ENST00000497377 ZNF831Q5JPB2 1677 aa15.22■□□□□ 0.03
HLA-B-254ENST00000497377 LOC102724428A0A0B4J2F2 783 aa15.21■□□□□ 0.03
HLA-B-254ENST00000497377 SIK1P57059 783 aa15.21■□□□□ 0.03
HLA-B-254ENST00000497377 NFATC2IPQ8NCF5 419 aa15.21■□□□□ 0.03
HLA-B-254ENST00000497377 LGR6Q9HBX8 967 aa15.21■□□□□ 0.03
HLA-B-254ENST00000497377 TAF1LQ8IZX4 1826 aa15.21■□□□□ 0.03
HLA-B-254ENST00000497377 C5P01031 1676 aa15.21■□□□□ 0.03
HLA-B-254ENST00000497377 QSER1Q2KHR3 1735 aa15.2■□□□□ 0.02
HLA-B-254ENST00000497377 ANP32CO43423 234 aa15.2■□□□□ 0.02
HLA-B-254ENST00000497377 HTATSF1O43719 755 aaKnown RBP15.2■□□□□ 0.02
HLA-B-254ENST00000497377 WDR43Q15061 677 aaKnown RBP eCLIP15.2■□□□□ 0.02
HLA-B-254ENST00000497377 PLEKHF1Q96S99 279 aa15.2■□□□□ 0.02
HLA-B-254ENST00000497377 RTF1Q92541 710 aaKnown RBP15.19■□□□□ 0.02
HLA-B-254ENST00000497377 MAPK8IP3Q9UPT6 1336 aa15.18■□□□□ 0.02
HLA-B-254ENST00000497377 LRP5O75197 1615 aa15.18■□□□□ 0.02
HLA-B-254ENST00000497377 KCNQ4P56696 695 aa15.18■□□□□ 0.02
HLA-B-254ENST00000497377 TEFQ10587 303 aa15.18■□□□□ 0.02
HLA-B-254ENST00000497377 CEMIPQ8WUJ3 1361 aa15.18■□□□□ 0.02
HLA-B-254ENST00000497377 CASZ1Q86V15 1759 aa15.18■□□□□ 0.02
HLA-B-254ENST00000497377 ZNF827Q17R98 1081 aa15.17■□□□□ 0.02
HLA-B-254ENST00000497377 IL17REQ8NFR9 667 aa15.17■□□□□ 0.02
HLA-B-254ENST00000497377 SIPA1L3O60292 1781 aaPredicted RBP15.16■□□□□ 0.02
HLA-B-254ENST00000497377 ATP6V1AP38606 617 aa15.16■□□□□ 0.02
HLA-B-254ENST00000497377 NFE2L2Q16236 605 aa15.16■□□□□ 0.02
HLA-B-254ENST00000497377 TFCP2L1Q9NZI6 479 aa15.16■□□□□ 0.02
HLA-B-254ENST00000497377 C4BP0C0L5 1744 aa15.16■□□□□ 0.02
HLA-B-254ENST00000497377 DLG5Q8TDM6 1919 aa15.15■□□□□ 0.02
HLA-B-254ENST00000497377 CICQ96RK0 1608 aaPredicted RBP15.15■□□□□ 0.02
HLA-B-254ENST00000497377 FLAD1Q8NFF5 587 aa15.15■□□□□ 0.02
HLA-B-254ENST00000497377 SRCAPQ6ZRS2 3230 aa15.15■□□□□ 0.02
HLA-B-254ENST00000497377 TUBGCP6Q96RT7 1819 aa15.15■□□□□ 0.02
HLA-B-254ENST00000497377 SLC16A10Q8TF71 515 aa15.14■□□□□ 0.01
HLA-B-254ENST00000497377 AK7Q96M32 723 aa15.14■□□□□ 0.01
HLA-B-254ENST00000497377 SPON1Q9HCB6 807 aa15.14■□□□□ 0.01
HLA-B-254ENST00000497377 PTCD1O75127 700 aaKnown RBP15.13■□□□□ 0.01
HLA-B-254ENST00000497377 COL5A3P25940 1745 aaPredicted RBP15.13■□□□□ 0.01
HLA-B-254ENST00000497377 ITPK1Q13572 414 aa15.13■□□□□ 0.01
HLA-B-254ENST00000497377 TTC5Q8N0Z6 440 aa15.13■□□□□ 0.01
HLA-B-254ENST00000497377 RUNDC1Q96C34 613 aa15.13■□□□□ 0.01
HLA-B-254ENST00000497377 ADAMTS8Q9UP79 889 aa15.13■□□□□ 0.01
HLA-B-254ENST00000497377 UBR2Q8IWV8 1755 aa15.13■□□□□ 0.01
HLA-B-254ENST00000497377 LMOD3Q0VAK6 560 aa15.12■□□□□ 0.01
HLA-B-254ENST00000497377 RC3H1Q5TC82 1133 aaKnown RBP15.12■□□□□ 0.01
HLA-B-254ENST00000497377 VSIG10Q8N0Z9 540 aa15.12■□□□□ 0.01
HLA-B-254ENST00000497377 LINC00116Q8NCU8 138 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms