RNA–Protein interactions for RNA: ENST00000496728.1

TSC22D4-206, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-206ENST00000496728 KCNQ4P56696 695 aa26.69■■□□□ 1.86
TSC22D4-206ENST00000496728 R3HDM1Q15032 1099 aaKnown RBP26.68■■□□□ 1.86
TSC22D4-206ENST00000496728 STK32BQ9NY57 414 aa26.68■■□□□ 1.86
TSC22D4-206ENST00000496728 RREB1Q92766 1687 aa26.68■■□□□ 1.86
TSC22D4-206ENST00000496728 LOC102724428A0A0B4J2F2 783 aa26.67■■□□□ 1.86
TSC22D4-206ENST00000496728 SIK1P57059 783 aa26.67■■□□□ 1.86
TSC22D4-206ENST00000496728 MCM10Q7L590 875 aa26.67■■□□□ 1.86
TSC22D4-206ENST00000496728 PSDA5PKW4 1024 aaPredicted RBP26.66■■□□□ 1.86
TSC22D4-206ENST00000496728 PNISRQ8TF01 805 aaKnown RBP26.66■■□□□ 1.86
TSC22D4-206ENST00000496728 RBM42Q9BTD8 480 aaKnown RBP26.66■■□□□ 1.86
TSC22D4-206ENST00000496728 CEMIPQ8WUJ3 1361 aa26.66■■□□□ 1.86
TSC22D4-206ENST00000496728 TMPOP42166 694 aaKnown RBP26.65■■□□□ 1.86
TSC22D4-206ENST00000496728 RIPK4P57078 832 aa26.65■■□□□ 1.86
TSC22D4-206ENST00000496728 ANO8Q9HCE9 1232 aaPredicted RBP26.65■■□□□ 1.86
TSC22D4-206ENST00000496728 SCN11AQ9UI33 1791 aa26.65■■□□□ 1.86
TSC22D4-206ENST00000496728 MRC1P22897 1456 aa26.64■■□□□ 1.86
TSC22D4-206ENST00000496728 DCTN1Q14203 1278 aa26.64■■□□□ 1.86
TSC22D4-206ENST00000496728 DIEXFQ68CQ4 756 aaKnown RBP26.64■■□□□ 1.86
TSC22D4-206ENST00000496728 NUP188Q5SRE5 1749 aa26.64■■□□□ 1.85
TSC22D4-206ENST00000496728 PTCD1O75127 700 aaKnown RBP26.63■■□□□ 1.85
TSC22D4-206ENST00000496728 ATP6V1AP38606 617 aa26.63■■□□□ 1.85
TSC22D4-206ENST00000496728 SLC15A2Q16348 729 aa26.63■■□□□ 1.85
TSC22D4-206ENST00000496728 LMOD3Q0VAK6 560 aa26.62■■□□□ 1.85
TSC22D4-206ENST00000496728 SLC39A6Q13433 755 aa26.62■■□□□ 1.85
TSC22D4-206ENST00000496728 ADAMTS7Q9UKP4 1686 aa26.62■■□□□ 1.85
TSC22D4-206ENST00000496728 NEUROD2Q15784 382 aa26.61■■□□□ 1.85
TSC22D4-206ENST00000496728 TTC5Q8N0Z6 440 aa26.6■■□□□ 1.85
TSC22D4-206ENST00000496728 RRP7AQ9Y3A4 280 aaKnown RBP26.6■■□□□ 1.85
TSC22D4-206ENST00000496728 LY75O60449 1722 aa26.59■■□□□ 1.85
TSC22D4-206ENST00000496728 BTBD11A6QL63 1104 aa26.59■■□□□ 1.85
TSC22D4-206ENST00000496728 AKT1S1Q96B36 256 aa26.59■■□□□ 1.85
TSC22D4-206ENST00000496728 ZNF827Q17R98 1081 aa26.58■■□□□ 1.85
TSC22D4-206ENST00000496728 APAF1O14727 1248 aa26.57■■□□□ 1.84
TSC22D4-206ENST00000496728 TAF7Q15545 349 aaPredicted RBP26.57■■□□□ 1.84
TSC22D4-206ENST00000496728 TFCP2L1Q9NZI6 479 aa26.57■■□□□ 1.84
TSC22D4-206ENST00000496728 ITPK1Q13572 414 aa26.56■■□□□ 1.84
TSC22D4-206ENST00000496728 ZNF790Q6PG37 636 aa26.56■■□□□ 1.84
TSC22D4-206ENST00000496728 SLC4A9Q96Q91 983 aa26.56■■□□□ 1.84
TSC22D4-206ENST00000496728 FAM9BQ8IZU0 186 aa26.55■■□□□ 1.84
TSC22D4-206ENST00000496728 THUMPD2Q9BTF0 503 aaKnown RBP26.55■■□□□ 1.84
TSC22D4-206ENST00000496728 LINC00116Q8NCU8 138 aa26.54■■□□□ 1.84
TSC22D4-206ENST00000496728 AK7Q96M32 723 aa26.54■■□□□ 1.84
TSC22D4-206ENST00000496728 CCER2I3L3R5 266 aa26.53■■□□□ 1.84
TSC22D4-206ENST00000496728 PAPPAQ13219 1627 aa26.52■■□□□ 1.84
TSC22D4-206ENST00000496728 VSIG10Q8N0Z9 540 aa26.51■■□□□ 1.83
TSC22D4-206ENST00000496728 FMNL2Q96PY5 1086 aa26.51■■□□□ 1.83
TSC22D4-206ENST00000496728 TRIM35Q9UPQ4 493 aa26.51■■□□□ 1.83
TSC22D4-206ENST00000496728 ZNF496Q96IT1 587 aaPredicted RBP26.5■■□□□ 1.83
TSC22D4-206ENST00000496728 KCNQ3O43525 872 aa26.49■■□□□ 1.83
TSC22D4-206ENST00000496728 MIS18AQ9NYP9 233 aa26.49■■□□□ 1.83
TSC22D4-206ENST00000496728 VIRMAQ69YN4 1812 aaKnown RBP26.49■■□□□ 1.83
TSC22D4-206ENST00000496728 RC3H1Q5TC82 1133 aaKnown RBP26.48■■□□□ 1.83
TSC22D4-206ENST00000496728 DNAJC10Q8IXB1 793 aa26.48■■□□□ 1.83
TSC22D4-206ENST00000496728 FLAD1Q8NFF5 587 aa26.47■■□□□ 1.83
TSC22D4-206ENST00000496728 DLG5Q8TDM6 1919 aa26.47■■□□□ 1.83
TSC22D4-206ENST00000496728 PNPLA7Q6ZV29 1317 aa26.46■■□□□ 1.83
TSC22D4-206ENST00000496728 KCPQ6ZWJ8 1503 aa26.46■■□□□ 1.83
TSC22D4-206ENST00000496728 GNPATO15228 680 aa26.46■■□□□ 1.83
TSC22D4-206ENST00000496728 TEX13AQ9BXU3 409 aaPredicted RBP26.46■■□□□ 1.83
TSC22D4-206ENST00000496728 PDGFDQ9GZP0 370 aaPredicted RBP26.46■■□□□ 1.83
TSC22D4-206ENST00000496728 HEG1Q9ULI3 1381 aa26.46■■□□□ 1.83
TSC22D4-206ENST00000496728 CNTNAP4Q9C0A0 1308 aa26.45■■□□□ 1.83
TSC22D4-206ENST00000496728 C5P01031 1676 aa26.45■■□□□ 1.82
TSC22D4-206ENST00000496728 MSH5O43196 834 aa26.45■■□□□ 1.82
TSC22D4-206ENST00000496728 CRKLP46109 303 aaKnown RBP26.45■■□□□ 1.82
TSC22D4-206ENST00000496728 MIER1Q8N108 512 aa26.45■■□□□ 1.82
TSC22D4-206ENST00000496728 BABAM1Q9NWV8 329 aa26.45■■□□□ 1.82
TSC22D4-206ENST00000496728 SIPA1L3O60292 1781 aaPredicted RBP26.44■■□□□ 1.82
TSC22D4-206ENST00000496728 STARD3NLO95772 234 aa26.44■■□□□ 1.82
TSC22D4-206ENST00000496728 TSPYL4Q9UJ04 414 aa26.44■■□□□ 1.82
TSC22D4-206ENST00000496728 RTCBQ9Y3I0 505 aaKnown RBP26.44■■□□□ 1.82
TSC22D4-206ENST00000496728 C4BP0C0L5 1744 aa26.44■■□□□ 1.82
TSC22D4-206ENST00000496728 ZNF831Q5JPB2 1677 aa26.44■■□□□ 1.82
TSC22D4-206ENST00000496728 CYP19A1P11511 503 aaPredicted RBP26.43■■□□□ 1.82
TSC22D4-206ENST00000496728 CALD1Q05682 793 aaKnown RBP26.43■■□□□ 1.82
TSC22D4-206ENST00000496728 PHF14O94880 888 aa26.42■■□□□ 1.82
TSC22D4-206ENST00000496728 SSFA2P28290 1259 aa26.42■■□□□ 1.82
TSC22D4-206ENST00000496728 COL23A1Q86Y22 540 aaPredicted RBP26.42■■□□□ 1.82
TSC22D4-206ENST00000496728 SLC16A10Q8TF71 515 aa26.42■■□□□ 1.82
TSC22D4-206ENST00000496728 LAS1LQ9Y4W2 734 aaKnown RBP26.42■■□□□ 1.82
TSC22D4-206ENST00000496728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.41■■□□□ 1.82
TSC22D4-206ENST00000496728 RPS6KA4O75676 772 aa26.41■■□□□ 1.82
TSC22D4-206ENST00000496728 SNRPA1P09661 255 aaKnown RBP26.41■■□□□ 1.82
TSC22D4-206ENST00000496728 CCDC87Q9NVE4 849 aa26.41■■□□□ 1.82
TSC22D4-206ENST00000496728 TAF1LQ8IZX4 1826 aa26.41■■□□□ 1.82
TSC22D4-206ENST00000496728 SENP3-EIF4A1A0A087X0R7 540 aa26.4■■□□□ 1.82
TSC22D4-206ENST00000496728 ZBTB7AO95365 584 aa26.4■■□□□ 1.82
TSC22D4-206ENST00000496728 NCBP3Q53F19 620 aaKnown RBP26.4■■□□□ 1.82
TSC22D4-206ENST00000496728 SPON1Q9HCB6 807 aa26.4■■□□□ 1.82
TSC22D4-206ENST00000496728 EIF4A1P60842 406 aaKnown RBP26.39■■□□□ 1.82
TSC22D4-206ENST00000496728 CCDC27Q2M243 656 aa26.39■■□□□ 1.82
TSC22D4-206ENST00000496728 INTS5Q6P9B9 1019 aaKnown RBP26.39■■□□□ 1.82
TSC22D4-206ENST00000496728 CHL1O00533 1208 aa26.38■■□□□ 1.81
TSC22D4-206ENST00000496728 TRAPPC3LQ5T215 181 aa26.38■■□□□ 1.81
TSC22D4-206ENST00000496728 SMIM5Q71RC9 77 aa26.38■■□□□ 1.81
TSC22D4-206ENST00000496728 AMIGO3Q86WK7 504 aa26.38■■□□□ 1.81
TSC22D4-206ENST00000496728 MTFR1LQ9H019 292 aa26.38■■□□□ 1.81
TSC22D4-206ENST00000496728 ADRA2BP18089 450 aa26.37■■□□□ 1.81
TSC22D4-206ENST00000496728 CFAP44Q96MT7 982 aa26.37■■□□□ 1.81
TSC22D4-206ENST00000496728 ATF5Q9Y2D1 282 aaPredicted RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms