RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 CFAP44Q96MT7 982 aa12.96□□□□□ -0.33
C4A-258ENST00000496659 CAMKK2Q96RR4 588 aa12.96□□□□□ -0.33
C4A-258ENST00000496659 SCN11AQ9UI33 1791 aa12.96□□□□□ -0.34
C4A-258ENST00000496659 KDM6AO15550 1401 aaPredicted RBP12.96□□□□□ -0.34
C4A-258ENST00000496659 APBA3O96018 575 aa12.95□□□□□ -0.34
C4A-258ENST00000496659 SLFN5Q08AF3 891 aa12.95□□□□□ -0.34
C4A-258ENST00000496659 THUMPD2Q9BTF0 503 aaKnown RBP12.95□□□□□ -0.34
C4A-258ENST00000496659 LAS1LQ9Y4W2 734 aaKnown RBP12.95□□□□□ -0.34
C4A-258ENST00000496659 ERVV-2B6SEH9 535 aa12.94□□□□□ -0.34
C4A-258ENST00000496659 CABP4P57796 275 aa12.94□□□□□ -0.34
C4A-258ENST00000496659 TAF7Q15545 349 aaPredicted RBP12.94□□□□□ -0.34
C4A-258ENST00000496659 IL17REQ8NFR9 667 aa12.94□□□□□ -0.34
C4A-258ENST00000496659 SLC52A2Q9HAB3 445 aa12.94□□□□□ -0.34
C4A-258ENST00000496659 FANCIQ9NVI1 1328 aa12.93□□□□□ -0.34
C4A-258ENST00000496659 R3HDM1Q15032 1099 aaKnown RBP12.93□□□□□ -0.34
C4A-258ENST00000496659 PTF1AQ7RTS3 328 aa12.93□□□□□ -0.34
C4A-258ENST00000496659 TSPYL4Q9UJ04 414 aa12.93□□□□□ -0.34
C4A-258ENST00000496659 VIRMAQ69YN4 1812 aaKnown RBP12.92□□□□□ -0.34
C4A-258ENST00000496659 DOT1LQ8TEK3 1739 aa12.92□□□□□ -0.34
C4A-258ENST00000496659 CDCA7LQ96GN5 454 aa12.92□□□□□ -0.34
C4A-258ENST00000496659 LGR6Q9HBX8 967 aa12.92□□□□□ -0.34
C4A-258ENST00000496659 TMOD3Q9NYL9 352 aa12.92□□□□□ -0.34
C4A-258ENST00000496659 BCL9O00512 1426 aa12.91□□□□□ -0.34
C4A-258ENST00000496659 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
C4A-258ENST00000496659 CHL1O00533 1208 aa12.91□□□□□ -0.34
C4A-258ENST00000496659 CT47B1P0C2W7 299 aaPredicted RBP12.91□□□□□ -0.34
C4A-258ENST00000496659 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
C4A-258ENST00000496659 DUSP27Q5VZP5 1158 aa12.91□□□□□ -0.34
C4A-258ENST00000496659 TTC5Q8N0Z6 440 aa12.91□□□□□ -0.34
C4A-258ENST00000496659 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
C4A-258ENST00000496659 SIPA1L3O60292 1781 aaPredicted RBP12.91□□□□□ -0.34
C4A-258ENST00000496659 TOGARAM1Q9Y4F4 1720 aa12.91□□□□□ -0.34
C4A-258ENST00000496659 KDM3BQ7LBC6 1761 aa12.9□□□□□ -0.34
C4A-258ENST00000496659 TRMT2AQ8IZ69 625 aaKnown RBP12.9□□□□□ -0.34
C4A-258ENST00000496659 CHMP4AQ9BY43 222 aa12.9□□□□□ -0.34
C4A-258ENST00000496659 MBIPQ9NS73 344 aa12.9□□□□□ -0.34
C4A-258ENST00000496659 SOS1Q07889 1333 aaPredicted RBP12.89□□□□□ -0.35
C4A-258ENST00000496659 TSR2Q969E8 191 aaKnown RBP12.89□□□□□ -0.35
C4A-258ENST00000496659 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
C4A-258ENST00000496659 SBF2Q86WG5 1849 aa12.88□□□□□ -0.35
C4A-258ENST00000496659 NFATC2IPQ8NCF5 419 aa12.88□□□□□ -0.35
C4A-258ENST00000496659 ZNF428Q96B54 188 aa12.88□□□□□ -0.35
C4A-258ENST00000496659 SYTL4Q96C24 671 aaPredicted RBP12.88□□□□□ -0.35
C4A-258ENST00000496659 PAPPAQ13219 1627 aa12.88□□□□□ -0.35
C4A-258ENST00000496659 NHSQ6T4R5 1651 aa12.87□□□□□ -0.35
C4A-258ENST00000496659 KAT6BQ8WYB5 2073 aa12.87□□□□□ -0.35
C4A-258ENST00000496659 HOXB7P09629 217 aa12.86□□□□□ -0.35
C4A-258ENST00000496659 EXOSC9Q06265 439 aaKnown RBP12.86□□□□□ -0.35
C4A-258ENST00000496659 ZNF790Q6PG37 636 aa12.86□□□□□ -0.35
C4A-258ENST00000496659 PRIM1P49642 420 aaKnown RBP12.85□□□□□ -0.35
C4A-258ENST00000496659 TWISTNBQ3B726 338 aaPredicted RBP12.85□□□□□ -0.35
C4A-258ENST00000496659 PROM2Q8N271 834 aa12.85□□□□□ -0.35
C4A-258ENST00000496659 FMNL2Q96PY5 1086 aa12.85□□□□□ -0.35
C4A-258ENST00000496659 RREB1Q92766 1687 aa12.85□□□□□ -0.35
C4A-258ENST00000496659 ITGB4P16144 1822 aa12.85□□□□□ -0.35
C4A-258ENST00000496659 NUP188Q5SRE5 1749 aa12.85□□□□□ -0.35
C4A-258ENST00000496659 LRP5O75197 1615 aa12.84□□□□□ -0.35
C4A-258ENST00000496659 SMARCC1Q92922 1105 aaPredicted RBP12.84□□□□□ -0.35
C4A-258ENST00000496659 ACSBG1Q96GR2 724 aa12.84□□□□□ -0.35
C4A-258ENST00000496659 MIS18AQ9NYP9 233 aa12.84□□□□□ -0.35
C4A-258ENST00000496659 KCNQ2O43526 872 aa12.83□□□□□ -0.36
C4A-258ENST00000496659 EIF4A1P60842 406 aaKnown RBP12.83□□□□□ -0.36
C4A-258ENST00000496659 PIGBQ92521 554 aa12.83□□□□□ -0.36
C4A-258ENST00000496659 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
C4A-258ENST00000496659 RCAN3Q9UKA8 241 aa12.83□□□□□ -0.36
C4A-258ENST00000496659 UBR2Q8IWV8 1755 aa12.83□□□□□ -0.36
C4A-258ENST00000496659 PLSCR1O15162 318 aa12.82□□□□□ -0.36
C4A-258ENST00000496659 SLC39A6Q13433 755 aa12.82□□□□□ -0.36
C4A-258ENST00000496659 KCPQ6ZWJ8 1503 aa12.82□□□□□ -0.36
C4A-258ENST00000496659 ALDH1L2Q3SY69 923 aa12.81□□□□□ -0.36
C4A-258ENST00000496659 NBPF14Q5TI25 921 aa12.81□□□□□ -0.36
C4A-258ENST00000496659 VSIG10Q8N0Z9 540 aa12.81□□□□□ -0.36
C4A-258ENST00000496659 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.81□□□□□ -0.36
C4A-258ENST00000496659 ANO8Q9HCE9 1232 aaPredicted RBP12.81□□□□□ -0.36
C4A-258ENST00000496659 LAMB4A4D0S4 1761 aa12.81□□□□□ -0.36
C4A-258ENST00000496659 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
C4A-258ENST00000496659 HEG1Q9ULI3 1381 aa12.81□□□□□ -0.36
C4A-258ENST00000496659 SNRPA1P09661 255 aaKnown RBP12.8□□□□□ -0.36
C4A-258ENST00000496659 HMGB2P26583 209 aaKnown RBP12.8□□□□□ -0.36
C4A-258ENST00000496659 HDGFL1Q5TGJ6 251 aa12.8□□□□□ -0.36
C4A-258ENST00000496659 CCDC30Q5VVM6 783 aa12.8□□□□□ -0.36
C4A-258ENST00000496659 C8orf58Q8NAV2 365 aa12.8□□□□□ -0.36
C4A-258ENST00000496659 ZNF496Q96IT1 587 aaPredicted RBP12.8□□□□□ -0.36
C4A-258ENST00000496659 STK31Q9BXU1 1019 aa12.8□□□□□ -0.36
C4A-258ENST00000496659 TEX13AQ9BXU3 409 aaPredicted RBP12.8□□□□□ -0.36
C4A-258ENST00000496659 ATG3Q9NT62 314 aa12.8□□□□□ -0.36
C4A-258ENST00000496659 BTAF1O14981 1849 aa12.79□□□□□ -0.36
C4A-258ENST00000496659 ELL2O00472 640 aaPredicted RBP12.79□□□□□ -0.36
C4A-258ENST00000496659 KCNQ3O43525 872 aa12.79□□□□□ -0.36
C4A-258ENST00000496659 VAMP4O75379 141 aa12.79□□□□□ -0.36
C4A-258ENST00000496659 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
C4A-258ENST00000496659 PDGFDQ9GZP0 370 aaPredicted RBP12.79□□□□□ -0.36
C4A-258ENST00000496659 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
C4A-258ENST00000496659 ASAP1Q9ULH1 1129 aa12.79□□□□□ -0.36
C4A-258ENST00000496659 CICQ96RK0 1608 aaPredicted RBP12.79□□□□□ -0.36
C4A-258ENST00000496659 KIF16BQ96L93 1317 aa12.79□□□□□ -0.36
C4A-258ENST00000496659 ZNF831Q5JPB2 1677 aa12.78□□□□□ -0.36
C4A-258ENST00000496659 PTCD1O75127 700 aaKnown RBP12.78□□□□□ -0.36
C4A-258ENST00000496659 GIGYF1O75420 1035 aaPredicted RBP12.78□□□□□ -0.36
C4A-258ENST00000496659 CANXP27824 592 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms