RNA–Protein interactions for RNA: ENST00000496327.1

CNOT3-207, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-207ENST00000496327 TEFQ10587 303 aa22.07■■□□□ 1.12
CNOT3-207ENST00000496327 R3HDM1Q15032 1099 aaKnown RBP22.07■■□□□ 1.12
CNOT3-207ENST00000496327 CCDC146Q8IYE0 955 aa22.07■■□□□ 1.12
CNOT3-207ENST00000496327 RUNDC1Q96C34 613 aa22.07■■□□□ 1.12
CNOT3-207ENST00000496327 STK32BQ9NY57 414 aa22.07■■□□□ 1.12
CNOT3-207ENST00000496327 CEMIPQ8WUJ3 1361 aa22.07■■□□□ 1.12
CNOT3-207ENST00000496327 ADAMTS7Q9UKP4 1686 aa22.07■■□□□ 1.12
CNOT3-207ENST00000496327 LOC102724428A0A0B4J2F2 783 aa22.06■■□□□ 1.12
CNOT3-207ENST00000496327 HMGB2P26583 209 aaKnown RBP22.06■■□□□ 1.12
CNOT3-207ENST00000496327 KCNQ4P56696 695 aa22.06■■□□□ 1.12
CNOT3-207ENST00000496327 SIK1P57059 783 aa22.06■■□□□ 1.12
CNOT3-207ENST00000496327 PSDA5PKW4 1024 aaPredicted RBP22.05■■□□□ 1.12
CNOT3-207ENST00000496327 SCN11AQ9UI33 1791 aa22.04■■□□□ 1.12
CNOT3-207ENST00000496327 MCM10Q7L590 875 aa22.04■■□□□ 1.12
CNOT3-207ENST00000496327 LY75O60449 1722 aa22.03■■□□□ 1.12
CNOT3-207ENST00000496327 TMPOP42166 694 aaKnown RBP22.03■■□□□ 1.12
CNOT3-207ENST00000496327 SLC15A2Q16348 729 aa22.03■■□□□ 1.12
CNOT3-207ENST00000496327 PNISRQ8TF01 805 aaKnown RBP22.03■■□□□ 1.12
CNOT3-207ENST00000496327 PAPPAQ13219 1627 aa22.02■■□□□ 1.12
CNOT3-207ENST00000496327 DCTN1Q14203 1278 aa22.02■■□□□ 1.12
CNOT3-207ENST00000496327 RBM42Q9BTD8 480 aaKnown RBP22.02■■□□□ 1.12
CNOT3-207ENST00000496327 ATP6V1AP38606 617 aa22.01■■□□□ 1.11
CNOT3-207ENST00000496327 RIPK4P57078 832 aa22.01■■□□□ 1.11
CNOT3-207ENST00000496327 ZNF827Q17R98 1081 aa22.01■■□□□ 1.11
CNOT3-207ENST00000496327 AKT1S1Q96B36 256 aa22.01■■□□□ 1.11
CNOT3-207ENST00000496327 PTCD1O75127 700 aaKnown RBP22■■□□□ 1.11
CNOT3-207ENST00000496327 LMOD3Q0VAK6 560 aa22■■□□□ 1.11
CNOT3-207ENST00000496327 SLC39A6Q13433 755 aa22■■□□□ 1.11
CNOT3-207ENST00000496327 ITPK1Q13572 414 aa21.99■■□□□ 1.11
CNOT3-207ENST00000496327 SLC4A9Q96Q91 983 aa21.99■■□□□ 1.11
CNOT3-207ENST00000496327 RRP7AQ9Y3A4 280 aaKnown RBP21.99■■□□□ 1.11
CNOT3-207ENST00000496327 DIEXFQ68CQ4 756 aaKnown RBP21.98■■□□□ 1.11
CNOT3-207ENST00000496327 TTC5Q8N0Z6 440 aa21.98■■□□□ 1.11
CNOT3-207ENST00000496327 BTBD11A6QL63 1104 aa21.97■■□□□ 1.11
CNOT3-207ENST00000496327 LINC00116Q8NCU8 138 aa21.97■■□□□ 1.11
CNOT3-207ENST00000496327 NEUROD2Q15784 382 aa21.96■■□□□ 1.11
CNOT3-207ENST00000496327 ZNF790Q6PG37 636 aa21.96■■□□□ 1.11
CNOT3-207ENST00000496327 THUMPD2Q9BTF0 503 aaKnown RBP21.96■■□□□ 1.11
CNOT3-207ENST00000496327 TFCP2L1Q9NZI6 479 aa21.96■■□□□ 1.11
CNOT3-207ENST00000496327 APAF1O14727 1248 aa21.95■■□□□ 1.1
CNOT3-207ENST00000496327 TAF7Q15545 349 aaPredicted RBP21.95■■□□□ 1.1
CNOT3-207ENST00000496327 AK7Q96M32 723 aa21.95■■□□□ 1.1
CNOT3-207ENST00000496327 KCPQ6ZWJ8 1503 aa21.94■■□□□ 1.1
CNOT3-207ENST00000496327 CCER2I3L3R5 266 aa21.92■■□□□ 1.1
CNOT3-207ENST00000496327 VSIG10Q8N0Z9 540 aa21.92■■□□□ 1.1
CNOT3-207ENST00000496327 ZNF496Q96IT1 587 aaPredicted RBP21.92■■□□□ 1.1
CNOT3-207ENST00000496327 TRIM35Q9UPQ4 493 aa21.92■■□□□ 1.1
CNOT3-207ENST00000496327 C5P01031 1676 aa21.91■■□□□ 1.1
CNOT3-207ENST00000496327 PNPLA7Q6ZV29 1317 aa21.91■■□□□ 1.1
CNOT3-207ENST00000496327 CNTNAP4Q9C0A0 1308 aa21.91■■□□□ 1.1
CNOT3-207ENST00000496327 KCNQ3O43525 872 aa21.91■■□□□ 1.1
CNOT3-207ENST00000496327 DNAJC10Q8IXB1 793 aa21.91■■□□□ 1.1
CNOT3-207ENST00000496327 FMNL2Q96PY5 1086 aa21.91■■□□□ 1.1
CNOT3-207ENST00000496327 HEG1Q9ULI3 1381 aa21.9■■□□□ 1.1
CNOT3-207ENST00000496327 RC3H1Q5TC82 1133 aaKnown RBP21.9■■□□□ 1.1
CNOT3-207ENST00000496327 FAM9BQ8IZU0 186 aa21.9■■□□□ 1.1
CNOT3-207ENST00000496327 PDGFDQ9GZP0 370 aaPredicted RBP21.9■■□□□ 1.1
CNOT3-207ENST00000496327 ZNF831Q5JPB2 1677 aa21.9■■□□□ 1.1
CNOT3-207ENST00000496327 SIPA1L3O60292 1781 aaPredicted RBP21.89■■□□□ 1.1
CNOT3-207ENST00000496327 C4BP0C0L5 1744 aa21.89■■□□□ 1.1
CNOT3-207ENST00000496327 GNPATO15228 680 aa21.89■■□□□ 1.09
CNOT3-207ENST00000496327 FLAD1Q8NFF5 587 aa21.89■■□□□ 1.09
CNOT3-207ENST00000496327 VIRMAQ69YN4 1812 aaKnown RBP21.88■■□□□ 1.09
CNOT3-207ENST00000496327 MIS18AQ9NYP9 233 aa21.88■■□□□ 1.09
CNOT3-207ENST00000496327 DLG5Q8TDM6 1919 aa21.87■■□□□ 1.09
CNOT3-207ENST00000496327 CRKLP46109 303 aaKnown RBP21.87■■□□□ 1.09
CNOT3-207ENST00000496327 CYP19A1P11511 503 aaPredicted RBP21.86■■□□□ 1.09
CNOT3-207ENST00000496327 SSFA2P28290 1259 aa21.86■■□□□ 1.09
CNOT3-207ENST00000496327 COL23A1Q86Y22 540 aaPredicted RBP21.86■■□□□ 1.09
CNOT3-207ENST00000496327 TEX13AQ9BXU3 409 aaPredicted RBP21.86■■□□□ 1.09
CNOT3-207ENST00000496327 BABAM1Q9NWV8 329 aa21.86■■□□□ 1.09
CNOT3-207ENST00000496327 TSPYL4Q9UJ04 414 aa21.86■■□□□ 1.09
CNOT3-207ENST00000496327 RTCBQ9Y3I0 505 aaKnown RBP21.86■■□□□ 1.09
CNOT3-207ENST00000496327 CICQ96RK0 1608 aaPredicted RBP21.86■■□□□ 1.09
CNOT3-207ENST00000496327 TAF1LQ8IZX4 1826 aa21.85■■□□□ 1.09
CNOT3-207ENST00000496327 UBR2Q8IWV8 1755 aa21.85■■□□□ 1.09
CNOT3-207ENST00000496327 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.85■■□□□ 1.09
CNOT3-207ENST00000496327 PHF14O94880 888 aa21.85■■□□□ 1.09
CNOT3-207ENST00000496327 ZBTB7AO95365 584 aa21.85■■□□□ 1.09
CNOT3-207ENST00000496327 STARD3NLO95772 234 aa21.85■■□□□ 1.09
CNOT3-207ENST00000496327 AMIGO3Q86WK7 504 aa21.85■■□□□ 1.09
CNOT3-207ENST00000496327 SLC16A10Q8TF71 515 aa21.85■■□□□ 1.09
CNOT3-207ENST00000496327 TJP1Q07157 1748 aa21.84■■□□□ 1.09
CNOT3-207ENST00000496327 MSH5O43196 834 aa21.84■■□□□ 1.09
CNOT3-207ENST00000496327 RPS6KA4O75676 772 aa21.84■■□□□ 1.09
CNOT3-207ENST00000496327 MTFR1LQ9H019 292 aa21.84■■□□□ 1.09
CNOT3-207ENST00000496327 SPON1Q9HCB6 807 aa21.84■■□□□ 1.09
CNOT3-207ENST00000496327 CCDC87Q9NVE4 849 aa21.84■■□□□ 1.09
CNOT3-207ENST00000496327 CASZ1Q86V15 1759 aa21.84■■□□□ 1.09
CNOT3-207ENST00000496327 SNRPA1P09661 255 aaKnown RBP21.83■■□□□ 1.09
CNOT3-207ENST00000496327 CALD1Q05682 793 aaKnown RBP21.83■■□□□ 1.09
CNOT3-207ENST00000496327 NCBP3Q53F19 620 aaKnown RBP21.83■■□□□ 1.09
CNOT3-207ENST00000496327 INTS5Q6P9B9 1019 aaKnown RBP21.83■■□□□ 1.09
CNOT3-207ENST00000496327 ADRA2BP18089 450 aa21.82■■□□□ 1.08
CNOT3-207ENST00000496327 EIF4A1P60842 406 aaKnown RBP21.82■■□□□ 1.08
CNOT3-207ENST00000496327 CCDC27Q2M243 656 aa21.82■■□□□ 1.08
CNOT3-207ENST00000496327 SMIM5Q71RC9 77 aa21.82■■□□□ 1.08
CNOT3-207ENST00000496327 MIER1Q8N108 512 aa21.82■■□□□ 1.08
CNOT3-207ENST00000496327 COL5A3P25940 1745 aaPredicted RBP21.81■■□□□ 1.08
CNOT3-207ENST00000496327 QSER1Q2KHR3 1735 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms