RNA–Protein interactions for RNA: ENST00000496206.5

NEPRO-223, Transcript of nucleolus and neural progenitor protein, human

TSL 5

Gene NEPRO, Length 751 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-223	ENST00000496206	SIK1	P57059	783 aa		11.94	□□□□□ -0.5
NEPRO-223	ENST00000496206	AMOT	Q4VCS5	1084 aa		11.94	□□□□□ -0.5
NEPRO-223	ENST00000496206	MSL1	Q68DK7	614 aa		11.94	□□□□□ -0.5
NEPRO-223	ENST00000496206	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.94	□□□□□ -0.5
NEPRO-223	ENST00000496206	COL5A3	P25940	1745 aa	Predicted RBP	11.94	□□□□□ -0.5
NEPRO-223	ENST00000496206	ERVV-2	B6SEH9	535 aa		11.93	□□□□□ -0.5
NEPRO-223	ENST00000496206	SULT6B1	Q6IMI4	303 aa		11.93	□□□□□ -0.5
NEPRO-223	ENST00000496206	DCAF5	Q96JK2	942 aa		11.93	□□□□□ -0.5
NEPRO-223	ENST00000496206	KDM6A	O15550	1401 aa	Predicted RBP	11.93	□□□□□ -0.5
NEPRO-223	ENST00000496206	KDR	P35968	1356 aa		11.92	□□□□□ -0.5
NEPRO-223	ENST00000496206	PHF14	O94880	888 aa		11.92	□□□□□ -0.5
NEPRO-223	ENST00000496206	IL13	P35225	146 aa		11.92	□□□□□ -0.5
NEPRO-223	ENST00000496206	C1orf141	Q5JVX7	400 aa		11.92	□□□□□ -0.5
NEPRO-223	ENST00000496206	LINC00116	Q8NCU8	138 aa		11.92	□□□□□ -0.5
NEPRO-223	ENST00000496206	ATG3	Q9NT62	314 aa		11.92	□□□□□ -0.5
NEPRO-223	ENST00000496206	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.91	□□□□□ -0.5
NEPRO-223	ENST00000496206	PER1	O15534	1290 aa	Predicted RBP	11.91	□□□□□ -0.5
NEPRO-223	ENST00000496206	ATP6V1A	P38606	617 aa		11.91	□□□□□ -0.5
NEPRO-223	ENST00000496206	MTHFS	P49914	203 aa		11.91	□□□□□ -0.5
NEPRO-223	ENST00000496206	ITPK1	Q13572	414 aa		11.91	□□□□□ -0.5
NEPRO-223	ENST00000496206	GPR162	Q16538	588 aa		11.91	□□□□□ -0.5
NEPRO-223	ENST00000496206	CC2D1B	Q5T0F9	858 aa	Known RBP	11.91	□□□□□ -0.5
NEPRO-223	ENST00000496206	AMIGO3	Q86WK7	504 aa		11.91	□□□□□ -0.5
NEPRO-223	ENST00000496206	MYH14	Q7Z406	1995 aa	Known RBP	11.9	□□□□□ -0.5
NEPRO-223	ENST00000496206	GNPAT	O15228	680 aa		11.9	□□□□□ -0.5
NEPRO-223	ENST00000496206	SSFA2	P28290	1259 aa		11.9	□□□□□ -0.5
NEPRO-223	ENST00000496206	CABP4	P57796	275 aa		11.9	□□□□□ -0.5
NEPRO-223	ENST00000496206	PELP1	Q8IZL8	1130 aa	Known RBP	11.9	□□□□□ -0.5
NEPRO-223	ENST00000496206	NLGN2	Q8NFZ4	835 aa		11.9	□□□□□ -0.5
NEPRO-223	ENST00000496206	CNGB1	Q14028	1251 aa	Predicted RBP	11.89	□□□□□ -0.51
NEPRO-223	ENST00000496206	SMIM5	Q71RC9	77 aa		11.89	□□□□□ -0.51
NEPRO-223	ENST00000496206	RBM42	Q9BTD8	480 aa	Known RBP	11.89	□□□□□ -0.51
NEPRO-223	ENST00000496206	C4A	P0C0L4	1744 aa		11.89	□□□□□ -0.51
NEPRO-223	ENST00000496206	TJP1	Q07157	1748 aa		11.89	□□□□□ -0.51
NEPRO-223	ENST00000496206	NPC1L1	Q9UHC9	1359 aa		11.88	□□□□□ -0.51
NEPRO-223	ENST00000496206	CIC	Q96RK0	1608 aa	Predicted RBP	11.87	□□□□□ -0.51
NEPRO-223	ENST00000496206	DIAPH1	O60610	1272 aa	Known RBP	11.87	□□□□□ -0.51
NEPRO-223	ENST00000496206	HMOX1	P09601	288 aa		11.87	□□□□□ -0.51
NEPRO-223	ENST00000496206	NFATC2IP	Q8NCF5	419 aa		11.87	□□□□□ -0.51
NEPRO-223	ENST00000496206	SLC4A9	Q96Q91	983 aa		11.87	□□□□□ -0.51
NEPRO-223	ENST00000496206	PTCD1	O75127	700 aa	Known RBP	11.86	□□□□□ -0.51
NEPRO-223	ENST00000496206	AKAP4	Q5JQC9	854 aa		11.86	□□□□□ -0.51
NEPRO-223	ENST00000496206	CD2AP	Q9Y5K6	639 aa		11.86	□□□□□ -0.51
NEPRO-223	ENST00000496206	COL3A1	P02461	1466 aa	Predicted RBP	11.86	□□□□□ -0.51
NEPRO-223	ENST00000496206	ADAMTS7	Q9UKP4	1686 aa		11.86	□□□□□ -0.51
NEPRO-223	ENST00000496206	MRC1	P22897	1456 aa		11.85	□□□□□ -0.51
NEPRO-223	ENST00000496206	RTCB	Q9Y3I0	505 aa	Known RBP	11.85	□□□□□ -0.51
NEPRO-223	ENST00000496206	KIF13B	Q9NQT8	1826 aa		11.85	□□□□□ -0.51
NEPRO-223	ENST00000496206	CNTNAP4	Q9C0A0	1308 aa		11.85	□□□□□ -0.51
NEPRO-223	ENST00000496206	YBX3	P16989	372 aa	Known RBP eCLIP	11.84	□□□□□ -0.51
NEPRO-223	ENST00000496206	TRAPPC3L	Q5T215	181 aa		11.84	□□□□□ -0.51
NEPRO-223	ENST00000496206	RC3H1	Q5TC82	1133 aa	Known RBP	11.84	□□□□□ -0.51
NEPRO-223	ENST00000496206	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.84	□□□□□ -0.51
NEPRO-223	ENST00000496206	UBR2	Q8IWV8	1755 aa		11.83	□□□□□ -0.52
NEPRO-223	ENST00000496206	U2SURP	O15042	1029 aa	Known RBP	11.83	□□□□□ -0.52
NEPRO-223	ENST00000496206	GRIN3B	O60391	1043 aa		11.83	□□□□□ -0.52
NEPRO-223	ENST00000496206	SIPA1L3	O60292	1781 aa	Predicted RBP	11.82	□□□□□ -0.52
NEPRO-223	ENST00000496206	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.82	□□□□□ -0.52
NEPRO-223	ENST00000496206	RPS6KA4	O75676	772 aa		11.82	□□□□□ -0.52
NEPRO-223	ENST00000496206	MMP10	P09238	476 aa		11.82	□□□□□ -0.52
NEPRO-223	ENST00000496206	MTHFSD	Q2M296	383 aa	Known RBP	11.82	□□□□□ -0.52
NEPRO-223	ENST00000496206	SLC52A2	Q9HAB3	445 aa		11.82	□□□□□ -0.52
NEPRO-223	ENST00000496206	LGR6	Q9HBX8	967 aa		11.82	□□□□□ -0.52
NEPRO-223	ENST00000496206	KIAA1551	Q9HCM1	1747 aa		11.81	□□□□□ -0.52
NEPRO-223	ENST00000496206	RNMT	O43148	476 aa	Known RBP	11.81	□□□□□ -0.52
NEPRO-223	ENST00000496206	RFC4	P35249	363 aa		11.81	□□□□□ -0.52
NEPRO-223	ENST00000496206	CRKL	P46109	303 aa	Known RBP	11.81	□□□□□ -0.52
NEPRO-223	ENST00000496206	ARHGEF1	Q92888	912 aa	Known RBP	11.81	□□□□□ -0.52
NEPRO-223	ENST00000496206	KCP	Q6ZWJ8	1503 aa		11.81	□□□□□ -0.52
NEPRO-223	ENST00000496206	NLGN1	Q8N2Q7	840 aa		11.8	□□□□□ -0.52
NEPRO-223	ENST00000496206	CFAP53	Q96M91	514 aa		11.8	□□□□□ -0.52
NEPRO-223	ENST00000496206	BRCA1	P38398	1863 aa	Known RBP	11.79	□□□□□ -0.52
NEPRO-223	ENST00000496206	GYS1	P13807	737 aa		11.79	□□□□□ -0.52
NEPRO-223	ENST00000496206	SLC39A6	Q13433	755 aa		11.79	□□□□□ -0.52
NEPRO-223	ENST00000496206	DNAJC10	Q8IXB1	793 aa		11.78	□□□□□ -0.52
NEPRO-223	ENST00000496206	GAS2L2	Q8NHY3	880 aa		11.78	□□□□□ -0.52
NEPRO-223	ENST00000496206	WWC3	Q9ULE0	1092 aa		11.78	□□□□□ -0.52
NEPRO-223	ENST00000496206	CEP350	Q5VT06	3117 aa		11.78	□□□□□ -0.52
NEPRO-223	ENST00000496206	C10orf71	Q711Q0	1435 aa		11.77	□□□□□ -0.52
NEPRO-223	ENST00000496206	PXDNL	A1KZ92	1463 aa		11.77	□□□□□ -0.52
NEPRO-223	ENST00000496206	GNAT3	A8MTJ3	354 aa		11.77	□□□□□ -0.53
NEPRO-223	ENST00000496206	INTS5	Q6P9B9	1019 aa	Known RBP	11.77	□□□□□ -0.53
NEPRO-223	ENST00000496206	CCDC87	Q9NVE4	849 aa		11.77	□□□□□ -0.53
NEPRO-223	ENST00000496206	SRP68	Q9UHB9	627 aa	Known RBP	11.77	□□□□□ -0.53
NEPRO-223	ENST00000496206	PARP3	Q9Y6F1	533 aa		11.77	□□□□□ -0.53
NEPRO-223	ENST00000496206	USP42	Q9H9J4	1324 aa	Known RBP	11.77	□□□□□ -0.53
NEPRO-223	ENST00000496206	AFDN	P55196	1824 aa	Known RBP	11.76	□□□□□ -0.53
NEPRO-223	ENST00000496206	PPP2R1A	P30153	589 aa		11.76	□□□□□ -0.53
NEPRO-223	ENST00000496206	TEF	Q10587	303 aa		11.76	□□□□□ -0.53
NEPRO-223	ENST00000496206	TTC5	Q8N0Z6	440 aa		11.76	□□□□□ -0.53
NEPRO-223	ENST00000496206	NUDC	Q9Y266	331 aa		11.76	□□□□□ -0.53
NEPRO-223	ENST00000496206	ARFGEF1	Q9Y6D6	1849 aa		11.76	□□□□□ -0.53
NEPRO-223	ENST00000496206	CYP19A1	P11511	503 aa	Predicted RBP	11.75	□□□□□ -0.53
NEPRO-223	ENST00000496206	PRKAR2B	P31323	418 aa		11.75	□□□□□ -0.53
NEPRO-223	ENST00000496206	FKBP8	Q14318	412 aa		11.75	□□□□□ -0.53
NEPRO-223	ENST00000496206	VSIG10	Q8N0Z9	540 aa		11.75	□□□□□ -0.53
NEPRO-223	ENST00000496206	RSPH6A	Q9H0K4	717 aa		11.75	□□□□□ -0.53
NEPRO-223	ENST00000496206	DLG5	Q8TDM6	1919 aa		11.75	□□□□□ -0.53
NEPRO-223	ENST00000496206	SOS1	Q07889	1333 aa	Predicted RBP	11.75	□□□□□ -0.53
NEPRO-223	ENST00000496206	ZPR1	O75312	459 aa		11.74	□□□□□ -0.53

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