RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 GRPEL1Q9HAV7 217 aa11.24□□□□□ -0.61
TM9SF4-207ENST00000495749 ANKRD26Q9UPS8 1709 aa11.24□□□□□ -0.61
TM9SF4-207ENST00000495749 AIMP1Q12904 312 aaKnown RBP11.24□□□□□ -0.61
TM9SF4-207ENST00000495749 SLC39A6Q13433 755 aa11.24□□□□□ -0.61
TM9SF4-207ENST00000495749 GCC1Q96CN9 775 aa11.24□□□□□ -0.61
TM9SF4-207ENST00000495749 STRCQ7RTU9 1775 aa11.24□□□□□ -0.61
TM9SF4-207ENST00000495749 PTCH1Q13635 1447 aa11.23□□□□□ -0.61
TM9SF4-207ENST00000495749 NCOA3Q9Y6Q9 1424 aa11.23□□□□□ -0.61
TM9SF4-207ENST00000495749 PEAK1Q9H792 1746 aa11.23□□□□□ -0.61
TM9SF4-207ENST00000495749 CRB1P82279 1406 aa11.23□□□□□ -0.61
TM9SF4-207ENST00000495749 CEP85Q6P2H3 762 aa11.23□□□□□ -0.61
TM9SF4-207ENST00000495749 GBP4Q96PP9 640 aa11.22□□□□□ -0.61
TM9SF4-207ENST00000495749 PKNOX2Q96KN3 472 aa11.22□□□□□ -0.61
TM9SF4-207ENST00000495749 ARHGEF10O15013 1369 aa11.22□□□□□ -0.61
TM9SF4-207ENST00000495749 BTBD11A6QL63 1104 aa11.22□□□□□ -0.61
TM9SF4-207ENST00000495749 BRPF1P55201 1214 aaPredicted RBP11.22□□□□□ -0.61
TM9SF4-207ENST00000495749 RAB3GAP1Q15042 981 aa11.22□□□□□ -0.61
TM9SF4-207ENST00000495749 INTS3Q68E01 1043 aaKnown RBP11.22□□□□□ -0.61
TM9SF4-207ENST00000495749 ILDR2Q71H61 639 aa11.22□□□□□ -0.61
TM9SF4-207ENST00000495749 CHMP4BQ9H444 224 aaKnown RBP11.22□□□□□ -0.61
TM9SF4-207ENST00000495749 CHPF2Q9P2E5 772 aa11.22□□□□□ -0.61
TM9SF4-207ENST00000495749 CIZ1Q9ULV3 898 aaPredicted RBP11.22□□□□□ -0.61
TM9SF4-207ENST00000495749 ITSN1Q15811 1721 aa11.22□□□□□ -0.61
TM9SF4-207ENST00000495749 CCDC30Q5VVM6 783 aa11.21□□□□□ -0.61
TM9SF4-207ENST00000495749 IL1RAPL2Q9NP60 686 aa11.21□□□□□ -0.61
TM9SF4-207ENST00000495749 PNMA6EA0A0J9YXQ4 647 aa11.21□□□□□ -0.62
TM9SF4-207ENST00000495749 K7ELQ4 463 aaPredicted RBP11.21□□□□□ -0.62
TM9SF4-207ENST00000495749 C1orf141Q5JVX7 400 aa11.21□□□□□ -0.62
TM9SF4-207ENST00000495749 GAS2L3Q86XJ1 694 aa11.21□□□□□ -0.62
TM9SF4-207ENST00000495749 NAP1L5Q96NT1 182 aaPredicted RBP11.21□□□□□ -0.62
TM9SF4-207ENST00000495749 LRRFIP2Q9Y608 721 aaKnown RBP11.21□□□□□ -0.62
TM9SF4-207ENST00000495749 MON2Q7Z3U7 1717 aa11.21□□□□□ -0.62
TM9SF4-207ENST00000495749 NPHP4O75161 1426 aaPredicted RBP11.2□□□□□ -0.62
TM9SF4-207ENST00000495749 GSPT1P15170 499 aaKnown RBP11.2□□□□□ -0.62
TM9SF4-207ENST00000495749 JARID2Q92833 1246 aaPredicted RBP11.2□□□□□ -0.62
TM9SF4-207ENST00000495749 C19orf44Q9H6X5 657 aa11.2□□□□□ -0.62
TM9SF4-207ENST00000495749 PLEKHM2Q8IWE5 1019 aa11.2□□□□□ -0.62
TM9SF4-207ENST00000495749 PI4KAP2A4QPH2 592 aa11.19□□□□□ -0.62
TM9SF4-207ENST00000495749 MAP4K4O95819 1239 aaPredicted RBP11.19□□□□□ -0.62
TM9SF4-207ENST00000495749 CLCN1P35523 988 aa11.19□□□□□ -0.62
TM9SF4-207ENST00000495749 ARHGEF25Q86VW2 580 aa11.19□□□□□ -0.62
TM9SF4-207ENST00000495749 ANKRD44Q8N8A2 993 aa11.19□□□□□ -0.62
TM9SF4-207ENST00000495749 PI4KAP1Q8N8J0 262 aa11.19□□□□□ -0.62
TM9SF4-207ENST00000495749 KCNH5Q8NCM2 988 aa11.19□□□□□ -0.62
TM9SF4-207ENST00000495749 DCTPP1Q9H773 170 aa11.19□□□□□ -0.62
TM9SF4-207ENST00000495749 MAP3K5Q99683 1374 aa11.19□□□□□ -0.62
TM9SF4-207ENST00000495749 SSFA2P28290 1259 aa11.19□□□□□ -0.62
TM9SF4-207ENST00000495749 HAP1P54257 671 aaPredicted RBP11.19□□□□□ -0.62
TM9SF4-207ENST00000495749 PROSER3Q2NL68 480 aa11.19□□□□□ -0.62
TM9SF4-207ENST00000495749 CDC45O75419 566 aa11.19□□□□□ -0.62
TM9SF4-207ENST00000495749 KDRP35968 1356 aa11.19□□□□□ -0.62
TM9SF4-207ENST00000495749 MYL6BP14649 208 aa11.18□□□□□ -0.62
TM9SF4-207ENST00000495749 PLEKHO1Q53GL0 409 aaPredicted RBP11.18□□□□□ -0.62
TM9SF4-207ENST00000495749 TMEM94Q12767 1356 aa11.18□□□□□ -0.62
TM9SF4-207ENST00000495749 DLG5Q8TDM6 1919 aa11.18□□□□□ -0.62
TM9SF4-207ENST00000495749 RTL1A6NKG5 1358 aa11.18□□□□□ -0.62
TM9SF4-207ENST00000495749 AKAP12Q02952 1782 aa11.17□□□□□ -0.62
TM9SF4-207ENST00000495749 KNDC1Q76NI1 1749 aa11.17□□□□□ -0.62
TM9SF4-207ENST00000495749 GNAI2P04899 355 aa11.17□□□□□ -0.62
TM9SF4-207ENST00000495749 NBPF7P0C2Y1 421 aaPredicted RBP11.17□□□□□ -0.62
TM9SF4-207ENST00000495749 SKOR2Q2VWA4 1001 aaPredicted RBP11.17□□□□□ -0.62
TM9SF4-207ENST00000495749 ISY1Q9ULR0 285 aaKnown RBP11.17□□□□□ -0.62
TM9SF4-207ENST00000495749 ESPNB1AK53 854 aa11.17□□□□□ -0.62
TM9SF4-207ENST00000495749 RILPL2Q969X0 211 aa11.17□□□□□ -0.62
TM9SF4-207ENST00000495749 TRIM44Q96DX7 344 aaPredicted RBP11.17□□□□□ -0.62
TM9SF4-207ENST00000495749 PTPRCP08575 1304 aa11.17□□□□□ -0.62
TM9SF4-207ENST00000495749 EIF4A1P60842 406 aaKnown RBP11.17□□□□□ -0.62
TM9SF4-207ENST00000495749 NUTM1Q86Y26 1132 aa11.17□□□□□ -0.62
TM9SF4-207ENST00000495749 NFATC2IPQ8NCF5 419 aa11.17□□□□□ -0.62
TM9SF4-207ENST00000495749 RGS12O14924 1447 aa11.16□□□□□ -0.62
TM9SF4-207ENST00000495749 KIAA0232Q92628 1395 aa11.16□□□□□ -0.62
TM9SF4-207ENST00000495749 ERBB4Q15303 1308 aa11.16□□□□□ -0.62
TM9SF4-207ENST00000495749 TRIM6-TRIM34B2RNG4 842 aa11.16□□□□□ -0.62
TM9SF4-207ENST00000495749 RPAP2Q8IXW5 612 aaPredicted RBP11.16□□□□□ -0.62
TM9SF4-207ENST00000495749 RAPGEF4Q8WZA2 1011 aa11.16□□□□□ -0.62
TM9SF4-207ENST00000495749 USP44Q9H0E7 712 aa11.16□□□□□ -0.62
TM9SF4-207ENST00000495749 PIK3C2AO00443 1686 aa11.16□□□□□ -0.62
TM9SF4-207ENST00000495749 UBTFL1P0CB47 393 aaPredicted RBP11.16□□□□□ -0.62
TM9SF4-207ENST00000495749 SDSP20132 328 aa11.16□□□□□ -0.62
TM9SF4-207ENST00000495749 CCT4P50991 539 aaKnown RBP11.16□□□□□ -0.62
TM9SF4-207ENST00000495749 CWF19L2Q2TBE0 894 aaKnown RBP11.16□□□□□ -0.62
TM9SF4-207ENST00000495749 NOL8Q76FK4 1167 aaKnown RBP11.16□□□□□ -0.62
TM9SF4-207ENST00000495749 ANKARQ7Z5J8 1434 aa11.16□□□□□ -0.62
TM9SF4-207ENST00000495749 GOLGA6L22H0YM25 854 aa11.15□□□□□ -0.62
TM9SF4-207ENST00000495749 SURF6O75683 361 aaKnown RBP11.15□□□□□ -0.62
TM9SF4-207ENST00000495749 STRN4Q9NRL3 753 aa11.15□□□□□ -0.62
TM9SF4-207ENST00000495749 ADGRL3Q9HAR2 1447 aa11.15□□□□□ -0.62
TM9SF4-207ENST00000495749 AK9Q5TCS8 1911 aa11.15□□□□□ -0.62
TM9SF4-207ENST00000495749 RNMTO43148 476 aaKnown RBP11.15□□□□□ -0.62
TM9SF4-207ENST00000495749 DDX49Q9Y6V7 483 aaKnown RBP11.15□□□□□ -0.62
TM9SF4-207ENST00000495749 ZNF330Q9Y3S2 320 aaPredicted RBP11.14□□□□□ -0.63
TM9SF4-207ENST00000495749 A0A0G2JS52 829 aa11.14□□□□□ -0.63
TM9SF4-207ENST00000495749 SRGAP3O43295 1099 aa11.14□□□□□ -0.63
TM9SF4-207ENST00000495749 HMMRO75330 724 aa11.14□□□□□ -0.63
TM9SF4-207ENST00000495749 BAG4O95429 457 aaKnown RBP11.14□□□□□ -0.63
TM9SF4-207ENST00000495749 PTMSP20962 102 aa11.14□□□□□ -0.63
TM9SF4-207ENST00000495749 AKAP4Q5JQC9 854 aa11.14□□□□□ -0.63
TM9SF4-207ENST00000495749 PPP1R42Q7Z4L9 355 aa11.14□□□□□ -0.63
TM9SF4-207ENST00000495749 SRCIN1Q9C0H9 1055 aa11.14□□□□□ -0.63
TM9SF4-207ENST00000495749 OS9Q13438 667 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms