RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 TJAP1Q5JTD0 557 aa11.33□□□□□ -0.6
EPHA4-213ENST00000495693 TMEM132EQ6IEE7 984 aa11.33□□□□□ -0.6
EPHA4-213ENST00000495693 SLC24A3Q9HC58 644 aa11.33□□□□□ -0.6
EPHA4-213ENST00000495693 FAM217BQ9NTX9 383 aaPredicted RBP11.33□□□□□ -0.6
EPHA4-213ENST00000495693 GCGRP47871 477 aa11.32□□□□□ -0.6
EPHA4-213ENST00000495693 HDGFL2Q7Z4V5 671 aaPredicted RBP11.32□□□□□ -0.6
EPHA4-213ENST00000495693 MORC1Q86VD1 984 aa11.32□□□□□ -0.6
EPHA4-213ENST00000495693 RDH13Q8NBN7 331 aa11.32□□□□□ -0.6
EPHA4-213ENST00000495693 SRPK2P78362 688 aaKnown RBP11.31□□□□□ -0.6
EPHA4-213ENST00000495693 FBXO31Q5XUX0 539 aaPredicted RBP11.31□□□□□ -0.6
EPHA4-213ENST00000495693 MTRQ99707 1265 aa11.31□□□□□ -0.6
EPHA4-213ENST00000495693 IL21Q9HBE4 155 aa11.31□□□□□ -0.6
EPHA4-213ENST00000495693 FAM135BQ49AJ0 1406 aa11.31□□□□□ -0.6
EPHA4-213ENST00000495693 ATP7BP35670 1465 aa11.31□□□□□ -0.6
EPHA4-213ENST00000495693 TECPR2O15040 1411 aa11.3□□□□□ -0.6
EPHA4-213ENST00000495693 KCNC4Q03721 635 aa11.3□□□□□ -0.6
EPHA4-213ENST00000495693 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.3□□□□□ -0.6
EPHA4-213ENST00000495693 REPIN1Q9BWE0 567 aaKnown RBP11.3□□□□□ -0.6
EPHA4-213ENST00000495693 MLECQ14165 292 aa11.29□□□□□ -0.6
EPHA4-213ENST00000495693 CARD14Q9BXL6 1004 aa11.29□□□□□ -0.6
EPHA4-213ENST00000495693 PNNQ9H307 717 aaKnown RBP11.29□□□□□ -0.6
EPHA4-213ENST00000495693 RCAN3Q9UKA8 241 aa11.29□□□□□ -0.6
EPHA4-213ENST00000495693 PCDHB3Q9Y5E6 796 aa11.29□□□□□ -0.6
EPHA4-213ENST00000495693 SETD1AO15047 1707 aaKnown RBP11.29□□□□□ -0.6
EPHA4-213ENST00000495693 ANKRD26Q9UPS8 1709 aa11.29□□□□□ -0.6
EPHA4-213ENST00000495693 TTLL12Q14166 644 aaPredicted RBP11.28□□□□□ -0.6
EPHA4-213ENST00000495693 PRAM1Q96QH2 718 aa11.28□□□□□ -0.6
EPHA4-213ENST00000495693 ADAMTS8Q9UP79 889 aa11.28□□□□□ -0.6
EPHA4-213ENST00000495693 CPS1P31327 1500 aa11.28□□□□□ -0.6
EPHA4-213ENST00000495693 TMEM2Q9UHN6 1383 aa11.28□□□□□ -0.6
EPHA4-213ENST00000495693 UBR1Q8IWV7 1749 aa11.27□□□□□ -0.61
EPHA4-213ENST00000495693 PARP9Q8IXQ6 854 aa11.27□□□□□ -0.61
EPHA4-213ENST00000495693 SLC12A5Q9H2X9 1139 aa11.27□□□□□ -0.61
EPHA4-213ENST00000495693 DIP2AQ14689 1571 aa11.26□□□□□ -0.61
EPHA4-213ENST00000495693 RRP1P56182 461 aaKnown RBP11.26□□□□□ -0.61
EPHA4-213ENST00000495693 PDE4DQ08499 809 aa11.26□□□□□ -0.61
EPHA4-213ENST00000495693 NUTM2DQ5VT03 806 aaPredicted RBP11.26□□□□□ -0.61
EPHA4-213ENST00000495693 GIGYF2Q6Y7W6 1299 aaKnown RBP11.26□□□□□ -0.61
EPHA4-213ENST00000495693 STK26Q9P289 416 aa11.26□□□□□ -0.61
EPHA4-213ENST00000495693 EID1Q9Y6B2 187 aa11.26□□□□□ -0.61
EPHA4-213ENST00000495693 PLEKHG1Q9ULL1 1385 aa11.26□□□□□ -0.61
EPHA4-213ENST00000495693 E9PSI1 815 aa11.25□□□□□ -0.61
EPHA4-213ENST00000495693 SSTR3P32745 418 aaPredicted RBP11.25□□□□□ -0.61
EPHA4-213ENST00000495693 A0A1W2PP64 1363 aa11.25□□□□□ -0.61
EPHA4-213ENST00000495693 NRXN3Q9Y4C0 1643 aa11.24□□□□□ -0.61
EPHA4-213ENST00000495693 BLOC1S3Q6QNY0 202 aa11.24□□□□□ -0.61
EPHA4-213ENST00000495693 SLIT1O75093 1534 aa11.24□□□□□ -0.61
EPHA4-213ENST00000495693 FER1L4A9Z1Z3 1794 aa11.23□□□□□ -0.61
EPHA4-213ENST00000495693 ZPR1O75312 459 aa11.23□□□□□ -0.61
EPHA4-213ENST00000495693 ATP6V1AP38606 617 aa11.23□□□□□ -0.61
EPHA4-213ENST00000495693 USP46P62068 366 aa11.23□□□□□ -0.61
EPHA4-213ENST00000495693 RUNDC1Q96C34 613 aa11.23□□□□□ -0.61
EPHA4-213ENST00000495693 CCDC136Q96JN2 1154 aa11.23□□□□□ -0.61
EPHA4-213ENST00000495693 ZNF521Q96K83 1311 aa11.23□□□□□ -0.61
EPHA4-213ENST00000495693 ADGRB2O60241 1585 aa11.23□□□□□ -0.61
EPHA4-213ENST00000495693 KIF20BQ96Q89 1820 aa11.23□□□□□ -0.61
EPHA4-213ENST00000495693 NR1I2O75469 434 aa11.22□□□□□ -0.61
EPHA4-213ENST00000495693 NKTRP30414 1462 aaKnown RBP11.22□□□□□ -0.61
EPHA4-213ENST00000495693 COPS2P61201 443 aa11.22□□□□□ -0.61
EPHA4-213ENST00000495693 FUT2Q10981 343 aa11.22□□□□□ -0.61
EPHA4-213ENST00000495693 CCDC27Q2M243 656 aa11.22□□□□□ -0.61
EPHA4-213ENST00000495693 EDC4Q6P2E9 1401 aaKnown RBP11.22□□□□□ -0.61
EPHA4-213ENST00000495693 CDK19Q9BWU1 502 aa11.22□□□□□ -0.61
EPHA4-213ENST00000495693 ARHGAP23Q9P227 1491 aa11.21□□□□□ -0.61
EPHA4-213ENST00000495693 A0A0G2JS52 829 aa11.21□□□□□ -0.61
EPHA4-213ENST00000495693 KDM4AO75164 1064 aa11.21□□□□□ -0.61
EPHA4-213ENST00000495693 GRIPAP1Q4V328 841 aa11.21□□□□□ -0.61
EPHA4-213ENST00000495693 MORN1Q5T089 497 aa11.21□□□□□ -0.61
EPHA4-213ENST00000495693 THEMISQ8N1K5 641 aaPredicted RBP11.21□□□□□ -0.61
EPHA4-213ENST00000495693 ZNF516Q92618 1163 aa11.21□□□□□ -0.61
EPHA4-213ENST00000495693 SHPRHQ149N8 1683 aa11.2□□□□□ -0.62
EPHA4-213ENST00000495693 WASLO00401 505 aaPredicted RBP11.2□□□□□ -0.62
EPHA4-213ENST00000495693 NEFMP07197 916 aa11.2□□□□□ -0.62
EPHA4-213ENST00000495693 IRX6P78412 446 aaPredicted RBP11.2□□□□□ -0.62
EPHA4-213ENST00000495693 C3P01024 1663 aa11.2□□□□□ -0.62
EPHA4-213ENST00000495693 CDC42BPGQ6DT37 1551 aa11.2□□□□□ -0.62
EPHA4-213ENST00000495693 PIK3R4Q99570 1358 aa11.19□□□□□ -0.62
EPHA4-213ENST00000495693 MTHFSP49914 203 aa11.19□□□□□ -0.62
EPHA4-213ENST00000495693 SLFN5Q08AF3 891 aa11.19□□□□□ -0.62
EPHA4-213ENST00000495693 SAFB2Q14151 953 aaKnown RBP eCLIP11.19□□□□□ -0.62
EPHA4-213ENST00000495693 WDR63Q8IWG1 891 aa11.19□□□□□ -0.62
EPHA4-213ENST00000495693 SCUBE3Q8IX30 993 aa11.19□□□□□ -0.62
EPHA4-213ENST00000495693 CD163L1Q9NR16 1453 aa11.19□□□□□ -0.62
EPHA4-213ENST00000495693 PTCH1Q13635 1447 aa11.18□□□□□ -0.62
EPHA4-213ENST00000495693 PLEKHH1Q9ULM0 1364 aa11.18□□□□□ -0.62
EPHA4-213ENST00000495693 CT47B1P0C2W7 299 aaPredicted RBP11.18□□□□□ -0.62
EPHA4-213ENST00000495693 AAMPQ13685 434 aa11.18□□□□□ -0.62
EPHA4-213ENST00000495693 TPRNQ4KMQ1 711 aa11.18□□□□□ -0.62
EPHA4-213ENST00000495693 DUSP27Q5VZP5 1158 aa11.18□□□□□ -0.62
EPHA4-213ENST00000495693 SALL2Q9Y467 1007 aaPredicted RBP11.18□□□□□ -0.62
EPHA4-213ENST00000495693 IQSEC2Q5JU85 1478 aa11.18□□□□□ -0.62
EPHA4-213ENST00000495693 PPIP5K1Q6PFW1 1433 aa11.18□□□□□ -0.62
EPHA4-213ENST00000495693 MAPK8IP3Q9UPT6 1336 aa11.17□□□□□ -0.62
EPHA4-213ENST00000495693 APAF1O14727 1248 aa11.17□□□□□ -0.62
EPHA4-213ENST00000495693 MS4A1P11836 297 aa11.17□□□□□ -0.62
EPHA4-213ENST00000495693 TRMT2AQ8IZ69 625 aaKnown RBP11.17□□□□□ -0.62
EPHA4-213ENST00000495693 MYH16Q9H6N6 1097 aa11.17□□□□□ -0.62
EPHA4-213ENST00000495693 TBX22Q9Y458 520 aa11.17□□□□□ -0.62
EPHA4-213ENST00000495693 ITSN1Q15811 1721 aa11.17□□□□□ -0.62
EPHA4-213ENST00000495693 CPSF1Q10570 1443 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms