RNA–Protein interactions for RNA: ENST00000495656.5

ITSN1-232, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 535 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-232ENST00000495656 RRS1Q15050 365 aaKnown RBP9.73□□□□□ -0.85
ITSN1-232ENST00000495656 SLC27A3Q5K4L6 730 aa9.73□□□□□ -0.85
ITSN1-232ENST00000495656 NBPF6Q5VWK0 638 aa9.73□□□□□ -0.85
ITSN1-232ENST00000495656 USHBP1Q8N6Y0 703 aa9.73□□□□□ -0.85
ITSN1-232ENST00000495656 NLGN2Q8NFZ4 835 aa9.73□□□□□ -0.85
ITSN1-232ENST00000495656 COG3Q96JB2 828 aa9.73□□□□□ -0.85
ITSN1-232ENST00000495656 NBPF4Q96M43 638 aa9.73□□□□□ -0.85
ITSN1-232ENST00000495656 FYB1O15117 783 aa9.72□□□□□ -0.85
ITSN1-232ENST00000495656 ZCRB1Q8TBF4 217 aaKnown RBP9.72□□□□□ -0.85
ITSN1-232ENST00000495656 SLC16A10Q8TF71 515 aa9.72□□□□□ -0.85
ITSN1-232ENST00000495656 TFCP2L1Q9NZI6 479 aa9.72□□□□□ -0.85
ITSN1-232ENST00000495656 AMPHP49418 695 aa9.71□□□□□ -0.86
ITSN1-232ENST00000495656 PDAP1Q13442 181 aaKnown RBP9.71□□□□□ -0.86
ITSN1-232ENST00000495656 GPR162Q16538 588 aa9.71□□□□□ -0.86
ITSN1-232ENST00000495656 GGNBP2Q9H3C7 697 aa9.71□□□□□ -0.86
ITSN1-232ENST00000495656 ASTLQ6HA08 431 aaPredicted RBP9.7□□□□□ -0.86
ITSN1-232ENST00000495656 COL23A1Q86Y22 540 aaPredicted RBP9.7□□□□□ -0.86
ITSN1-232ENST00000495656 RNF25Q96BH1 459 aaPredicted RBP9.7□□□□□ -0.86
ITSN1-232ENST00000495656 CCNL1Q9UK58 526 aaPredicted RBP9.7□□□□□ -0.86
ITSN1-232ENST00000495656 TRPC6Q9Y210 931 aa9.7□□□□□ -0.86
ITSN1-232ENST00000495656 RTL1A6NKG5 1358 aa9.7□□□□□ -0.86
ITSN1-232ENST00000495656 PKD1L3Q7Z443 1732 aa9.7□□□□□ -0.86
ITSN1-232ENST00000495656 YBX3P16989 372 aaKnown RBP eCLIP9.69□□□□□ -0.86
ITSN1-232ENST00000495656 POLD1P28340 1107 aa9.69□□□□□ -0.86
ITSN1-232ENST00000495656 PSEN1P49768 467 aa9.69□□□□□ -0.86
ITSN1-232ENST00000495656 C1QTNF8P60827 252 aa9.69□□□□□ -0.86
ITSN1-232ENST00000495656 HSP90AB2PQ58FF8 381 aa9.69□□□□□ -0.86
ITSN1-232ENST00000495656 UBR3Q6ZT12 1888 aa9.69□□□□□ -0.86
ITSN1-232ENST00000495656 AMIGO3Q86WK7 504 aa9.69□□□□□ -0.86
ITSN1-232ENST00000495656 BMP2KQ9NSY1 1161 aaPredicted RBP9.69□□□□□ -0.86
ITSN1-232ENST00000495656 ANKRD26Q9UPS8 1709 aa9.69□□□□□ -0.86
ITSN1-232ENST00000495656 MAP2P11137 1827 aaKnown RBP9.68□□□□□ -0.86
ITSN1-232ENST00000495656 C4BP0C0L5 1744 aa9.68□□□□□ -0.86
ITSN1-232ENST00000495656 USP47Q96K76 1375 aa9.68□□□□□ -0.86
ITSN1-232ENST00000495656 RGL2O15211 777 aa9.68□□□□□ -0.86
ITSN1-232ENST00000495656 PELP1Q8IZL8 1130 aaKnown RBP9.68□□□□□ -0.86
ITSN1-232ENST00000495656 TMEM106CQ9BVX2 250 aa9.68□□□□□ -0.86
ITSN1-232ENST00000495656 RTN4Q9NQC3 1192 aaKnown RBP9.68□□□□□ -0.86
ITSN1-232ENST00000495656 INSRP06213 1382 aa9.67□□□□□ -0.86
ITSN1-232ENST00000495656 SENP3-EIF4A1A0A087X0R7 540 aa9.67□□□□□ -0.86
ITSN1-232ENST00000495656 TTLL13PA6NNM8 815 aa9.67□□□□□ -0.86
ITSN1-232ENST00000495656 CYP27B1O15528 508 aa9.67□□□□□ -0.86
ITSN1-232ENST00000495656 ATMINO43313 823 aaPredicted RBP9.67□□□□□ -0.86
ITSN1-232ENST00000495656 MSL1Q68DK7 614 aa9.67□□□□□ -0.86
ITSN1-232ENST00000495656 SMIM5Q71RC9 77 aa9.67□□□□□ -0.86
ITSN1-232ENST00000495656 CARD14Q9BXL6 1004 aa9.67□□□□□ -0.86
ITSN1-232ENST00000495656 CGNL1Q0VF96 1302 aa9.66□□□□□ -0.86
ITSN1-232ENST00000495656 POTEIP0CG38 1075 aa9.66□□□□□ -0.86
ITSN1-232ENST00000495656 RAPGEF4Q8WZA2 1011 aa9.66□□□□□ -0.86
ITSN1-232ENST00000495656 EMILIN1Q9Y6C2 1016 aa9.66□□□□□ -0.86
ITSN1-232ENST00000495656 NCAPD2Q15021 1401 aa9.65□□□□□ -0.86
ITSN1-232ENST00000495656 CEP350Q5VT06 3117 aa9.65□□□□□ -0.86
ITSN1-232ENST00000495656 FLT4P35916 1363 aa9.65□□□□□ -0.86
ITSN1-232ENST00000495656 PALLDQ8WX93 1383 aa9.65□□□□□ -0.86
ITSN1-232ENST00000495656 PCDH11XQ9BZA7 1347 aa9.65□□□□□ -0.86
ITSN1-232ENST00000495656 PCDH11YQ9BZA8 1340 aa9.65□□□□□ -0.86
ITSN1-232ENST00000495656 TATP17735 454 aaPredicted RBP9.65□□□□□ -0.86
ITSN1-232ENST00000495656 MPRIPQ6WCQ1 1025 aa9.65□□□□□ -0.86
ITSN1-232ENST00000495656 SMG6Q86US8 1419 aaKnown RBP9.65□□□□□ -0.87
ITSN1-232ENST00000495656 ATN1P54259 1190 aaPredicted RBP9.64□□□□□ -0.87
ITSN1-232ENST00000495656 TMF1P82094 1093 aa9.64□□□□□ -0.87
ITSN1-232ENST00000495656 PIGBQ92521 554 aa9.63□□□□□ -0.87
ITSN1-232ENST00000495656 NSD3Q9BZ95 1437 aa9.63□□□□□ -0.87
ITSN1-232ENST00000495656 KIF24Q5T7B8 1368 aa9.63□□□□□ -0.87
ITSN1-232ENST00000495656 KIAA1551Q9HCM1 1747 aa9.62□□□□□ -0.87
ITSN1-232ENST00000495656 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.62□□□□□ -0.87
ITSN1-232ENST00000495656 SLC24A1O60721 1099 aa9.62□□□□□ -0.87
ITSN1-232ENST00000495656 GIGYF1O75420 1035 aaPredicted RBP9.62□□□□□ -0.87
ITSN1-232ENST00000495656 ZFP91Q96JP5 570 aaPredicted RBP9.62□□□□□ -0.87
ITSN1-232ENST00000495656 GOLGA2Q08379 1002 aa9.61□□□□□ -0.87
ITSN1-232ENST00000495656 NKX1-1Q15270 411 aaPredicted RBP9.61□□□□□ -0.87
ITSN1-232ENST00000495656 LINC00116Q8NCU8 138 aa9.61□□□□□ -0.87
ITSN1-232ENST00000495656 TRIM35Q9UPQ4 493 aa9.61□□□□□ -0.87
ITSN1-232ENST00000495656 CD2APQ9Y5K6 639 aa9.61□□□□□ -0.87
ITSN1-232ENST00000495656 ATP10DQ9P241 1426 aa9.61□□□□□ -0.87
ITSN1-232ENST00000495656 ADCY9O60503 1353 aa9.61□□□□□ -0.87
ITSN1-232ENST00000495656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.6□□□□□ -0.87
ITSN1-232ENST00000495656 PPM1GO15355 546 aaPredicted RBP9.6□□□□□ -0.87
ITSN1-232ENST00000495656 GRIN3BO60391 1043 aa9.6□□□□□ -0.87
ITSN1-232ENST00000495656 PHF14O94880 888 aa9.6□□□□□ -0.87
ITSN1-232ENST00000495656 SLC39A7Q92504 469 aa9.6□□□□□ -0.87
ITSN1-232ENST00000495656 EYA1Q99502 592 aa9.6□□□□□ -0.87
ITSN1-232ENST00000495656 WWC3Q9ULE0 1092 aa9.6□□□□□ -0.87
ITSN1-232ENST00000495656 ASAP1Q9ULH1 1129 aa9.6□□□□□ -0.87
ITSN1-232ENST00000495656 KIF13BQ9NQT8 1826 aa9.6□□□□□ -0.87
ITSN1-232ENST00000495656 N4BP2Q86UW6 1770 aaPredicted RBP9.6□□□□□ -0.87
ITSN1-232ENST00000495656 COL5A3P25940 1745 aaPredicted RBP9.59□□□□□ -0.87
ITSN1-232ENST00000495656 WASHC2AQ641Q2 1341 aa9.59□□□□□ -0.87
ITSN1-232ENST00000495656 LOC102724428A0A0B4J2F2 783 aa9.59□□□□□ -0.87
ITSN1-232ENST00000495656 SIK1P57059 783 aa9.59□□□□□ -0.87
ITSN1-232ENST00000495656 ITPK1Q13572 414 aa9.59□□□□□ -0.87
ITSN1-232ENST00000495656 SMARCC1Q92922 1105 aaPredicted RBP9.59□□□□□ -0.87
ITSN1-232ENST00000495656 AK7Q96M32 723 aa9.59□□□□□ -0.87
ITSN1-232ENST00000495656 MYH14Q7Z406 1995 aaKnown RBP9.58□□□□□ -0.88
ITSN1-232ENST00000495656 C7P10643 843 aa9.58□□□□□ -0.88
ITSN1-232ENST00000495656 IER5LQ5T953 404 aa9.58□□□□□ -0.88
ITSN1-232ENST00000495656 FLAD1Q8NFF5 587 aa9.58□□□□□ -0.88
ITSN1-232ENST00000495656 POLKQ9UBT6 870 aa9.58□□□□□ -0.88
ITSN1-232ENST00000495656 C4AP0C0L4 1744 aa9.58□□□□□ -0.88
ITSN1-232ENST00000495656 ZNF831Q5JPB2 1677 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms