RNA–Protein interactions for RNA: ENST00000495368.1

SEC61A2-214, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 2

Gene SEC61A2, Length 2,311 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-214ENST00000495368 PTPRCP08575 1304 aa20.37■□□□□ 0.85
SEC61A2-214ENST00000495368 HDGFL1Q5TGJ6 251 aa20.37■□□□□ 0.85
SEC61A2-214ENST00000495368 SLC4A10Q6U841 1118 aa20.37■□□□□ 0.85
SEC61A2-214ENST00000495368 COL5A2P05997 1499 aaPredicted RBP20.36■□□□□ 0.85
SEC61A2-214ENST00000495368 CYP27B1O15528 508 aa20.36■□□□□ 0.85
SEC61A2-214ENST00000495368 INTS3Q68E01 1043 aaKnown RBP20.36■□□□□ 0.85
SEC61A2-214ENST00000495368 LARP1Q6PKG0 1096 aaKnown RBP20.36■□□□□ 0.85
SEC61A2-214ENST00000495368 KDM3BQ7LBC6 1761 aa20.36■□□□□ 0.85
SEC61A2-214ENST00000495368 EVA1CP58658 441 aa20.36■□□□□ 0.85
SEC61A2-214ENST00000495368 HDAC1Q13547 482 aaPredicted RBP20.36■□□□□ 0.85
SEC61A2-214ENST00000495368 KDM6AO15550 1401 aaPredicted RBP20.35■□□□□ 0.85
SEC61A2-214ENST00000495368 FLIIQ13045 1269 aa20.35■□□□□ 0.85
SEC61A2-214ENST00000495368 IFNL2Q8IZJ0 200 aa20.35■□□□□ 0.85
SEC61A2-214ENST00000495368 BACH2Q9BYV9 841 aa20.35■□□□□ 0.85
SEC61A2-214ENST00000495368 PRAMEF22A3QJZ6 481 aa20.34■□□□□ 0.85
SEC61A2-214ENST00000495368 SLC39A6Q13433 755 aa20.34■□□□□ 0.85
SEC61A2-214ENST00000495368 FKBP5Q13451 457 aaPredicted RBP20.34■□□□□ 0.85
SEC61A2-214ENST00000495368 USP35Q9P2H5 1018 aa20.34■□□□□ 0.85
SEC61A2-214ENST00000495368 PHAXQ9H814 394 aaKnown RBP20.33■□□□□ 0.85
SEC61A2-214ENST00000495368 ANXA1P04083 346 aa20.33■□□□□ 0.84
SEC61A2-214ENST00000495368 NFATC2IPQ8NCF5 419 aa20.33■□□□□ 0.84
SEC61A2-214ENST00000495368 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.33■□□□□ 0.84
SEC61A2-214ENST00000495368 OVOS2A0A0G2JMS6 1433 aa20.32■□□□□ 0.84
SEC61A2-214ENST00000495368 CHMP4BQ9H444 224 aaKnown RBP20.32■□□□□ 0.84
SEC61A2-214ENST00000495368 CHPF2Q9P2E5 772 aa20.32■□□□□ 0.84
SEC61A2-214ENST00000495368 PIP4K2BP78356 416 aa20.31■□□□□ 0.84
SEC61A2-214ENST00000495368 SIRT2Q8IXJ6 389 aa20.31■□□□□ 0.84
SEC61A2-214ENST00000495368 MEIS3Q99687 375 aa20.31■□□□□ 0.84
SEC61A2-214ENST00000495368 SLC52A2Q9HAB3 445 aa20.31■□□□□ 0.84
SEC61A2-214ENST00000495368 BTG4Q9NY30 223 aa20.31■□□□□ 0.84
SEC61A2-214ENST00000495368 SOS1Q07889 1333 aaPredicted RBP20.31■□□□□ 0.84
SEC61A2-214ENST00000495368 ADAMTS7Q9UKP4 1686 aa20.3■□□□□ 0.84
SEC61A2-214ENST00000495368 SIPA1L3O60292 1781 aaPredicted RBP20.29■□□□□ 0.84
SEC61A2-214ENST00000495368 ZCRB1Q8TBF4 217 aaKnown RBP20.29■□□□□ 0.84
SEC61A2-214ENST00000495368 CARD10Q9BWT7 1032 aa20.29■□□□□ 0.84
SEC61A2-214ENST00000495368 SMC5Q8IY18 1101 aa20.28■□□□□ 0.84
SEC61A2-214ENST00000495368 PKD1L3Q7Z443 1732 aa20.28■□□□□ 0.84
SEC61A2-214ENST00000495368 SCN11AQ9UI33 1791 aa20.28■□□□□ 0.84
SEC61A2-214ENST00000495368 GIGYF1O75420 1035 aaPredicted RBP20.28■□□□□ 0.84
SEC61A2-214ENST00000495368 NPM2Q86SE8 214 aaKnown RBP20.28■□□□□ 0.84
SEC61A2-214ENST00000495368 DCAF5Q96JK2 942 aa20.28■□□□□ 0.84
SEC61A2-214ENST00000495368 DDX54Q8TDD1 881 aaKnown RBP20.27■□□□□ 0.84
SEC61A2-214ENST00000495368 AHDC1Q5TGY3 1603 aaPredicted RBP20.27■□□□□ 0.84
SEC61A2-214ENST00000495368 IL2RBP14784 551 aa20.27■□□□□ 0.84
SEC61A2-214ENST00000495368 ZNF790Q6PG37 636 aa20.27■□□□□ 0.84
SEC61A2-214ENST00000495368 HOXB7P09629 217 aa20.26■□□□□ 0.83
SEC61A2-214ENST00000495368 C8orf34Q49A92 452 aa20.26■□□□□ 0.83
SEC61A2-214ENST00000495368 CCT4P50991 539 aaKnown RBP20.26■□□□□ 0.83
SEC61A2-214ENST00000495368 PROSER3Q2NL68 480 aa20.26■□□□□ 0.83
SEC61A2-214ENST00000495368 FAM161AQ3B820 660 aa20.26■□□□□ 0.83
SEC61A2-214ENST00000495368 CABP4P57796 275 aa20.25■□□□□ 0.83
SEC61A2-214ENST00000495368 HEG1Q9ULI3 1381 aa20.24■□□□□ 0.83
SEC61A2-214ENST00000495368 ADAMTS2O95450 1211 aa20.24■□□□□ 0.83
SEC61A2-214ENST00000495368 LNPKQ9C0E8 428 aa20.24■□□□□ 0.83
SEC61A2-214ENST00000495368 BCL11AQ9H165 835 aa20.24■□□□□ 0.83
SEC61A2-214ENST00000495368 PARP4Q9UKK3 1724 aaKnown RBP20.24■□□□□ 0.83
SEC61A2-214ENST00000495368 PCDH11XQ9BZA7 1347 aa20.23■□□□□ 0.83
SEC61A2-214ENST00000495368 PCDH11YQ9BZA8 1340 aa20.23■□□□□ 0.83
SEC61A2-214ENST00000495368 HSP90AB1P08238 724 aaKnown RBP20.23■□□□□ 0.83
SEC61A2-214ENST00000495368 ZNF496Q96IT1 587 aaPredicted RBP20.23■□□□□ 0.83
SEC61A2-214ENST00000495368 ANKRD45Q5TZF3 282 aa20.22■□□□□ 0.83
SEC61A2-214ENST00000495368 NUCB1Q02818 461 aa20.22■□□□□ 0.83
SEC61A2-214ENST00000495368 ATP10DQ9P241 1426 aa20.22■□□□□ 0.83
SEC61A2-214ENST00000495368 NUTM2BA6NNL0 878 aaPredicted RBP20.21■□□□□ 0.83
SEC61A2-214ENST00000495368 NUTM2EB1AL46 878 aaPredicted RBP20.21■□□□□ 0.83
SEC61A2-214ENST00000495368 CEP85Q6P2H3 762 aa20.21■□□□□ 0.83
SEC61A2-214ENST00000495368 NUTM2AQ8IVF1 878 aaPredicted RBP20.21■□□□□ 0.83
SEC61A2-214ENST00000495368 PHLPP1O60346 1717 aa20.21■□□□□ 0.83
SEC61A2-214ENST00000495368 ANKRD44Q8N8A2 993 aa20.21■□□□□ 0.83
SEC61A2-214ENST00000495368 DBF4Q9UBU7 674 aaPredicted RBP20.21■□□□□ 0.83
SEC61A2-214ENST00000495368 PI4KAP2A4QPH2 592 aa20.2■□□□□ 0.82
SEC61A2-214ENST00000495368 TTC5Q8N0Z6 440 aa20.2■□□□□ 0.82
SEC61A2-214ENST00000495368 PI4KAP1Q8N8J0 262 aa20.2■□□□□ 0.82
SEC61A2-214ENST00000495368 COL16A1Q07092 1604 aaPredicted RBP20.2■□□□□ 0.82
SEC61A2-214ENST00000495368 CHD1LQ86WJ1 897 aa20.2■□□□□ 0.82
SEC61A2-214ENST00000495368 CACNA1FO60840 1977 aa20.2■□□□□ 0.82
SEC61A2-214ENST00000495368 PLEKHG2Q9H7P9 1386 aa20.19■□□□□ 0.82
SEC61A2-214ENST00000495368 GCC1Q96CN9 775 aa20.19■□□□□ 0.82
SEC61A2-214ENST00000495368 MRC1P22897 1456 aa20.19■□□□□ 0.82
SEC61A2-214ENST00000495368 TOM1O60784 492 aa20.19■□□□□ 0.82
SEC61A2-214ENST00000495368 PIP4K2AP48426 406 aaPredicted RBP20.19■□□□□ 0.82
SEC61A2-214ENST00000495368 C5P01031 1676 aa20.18■□□□□ 0.82
SEC61A2-214ENST00000495368 MSH5O43196 834 aa20.18■□□□□ 0.82
SEC61A2-214ENST00000495368 COL22A1Q8NFW1 1626 aaPredicted RBP20.18■□□□□ 0.82
SEC61A2-214ENST00000495368 COL14A1Q05707 1796 aaKnown RBP20.18■□□□□ 0.82
SEC61A2-214ENST00000495368 AIMP1Q12904 312 aaKnown RBP20.18■□□□□ 0.82
SEC61A2-214ENST00000495368 CHMP4AQ9BY43 222 aa20.18■□□□□ 0.82
SEC61A2-214ENST00000495368 USP16Q9Y5T5 823 aa20.18■□□□□ 0.82
SEC61A2-214ENST00000495368 UBAP1LF5GYI3 381 aa20.17■□□□□ 0.82
SEC61A2-214ENST00000495368 APBB1O00213 710 aa20.17■□□□□ 0.82
SEC61A2-214ENST00000495368 MYL6BP14649 208 aa20.17■□□□□ 0.82
SEC61A2-214ENST00000495368 RPAP2Q8IXW5 612 aaPredicted RBP20.17■□□□□ 0.82
SEC61A2-214ENST00000495368 DNAAF4Q8WXU2 420 aa20.17■□□□□ 0.82
SEC61A2-214ENST00000495368 ADCY9O60503 1353 aa20.17■□□□□ 0.82
SEC61A2-214ENST00000495368 PDIA6Q15084 440 aa20.16■□□□□ 0.82
SEC61A2-214ENST00000495368 SHANK3Q9BYB0 1731 aa20.16■□□□□ 0.82
SEC61A2-214ENST00000495368 GNAI2P04899 355 aa20.16■□□□□ 0.82
SEC61A2-214ENST00000495368 ANP32AP39687 249 aaKnown RBP20.16■□□□□ 0.82
SEC61A2-214ENST00000495368 SRCIN1Q9C0H9 1055 aa20.16■□□□□ 0.82
SEC61A2-214ENST00000495368 USP44Q9H0E7 712 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms