RNA–Protein interactions for RNA: ENST00000495363.5

SMIM11A-207, Transcript of small integral membrane protein 11A, humanhuman

TSL 5

Gene SMIM11A, Length 1,029 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-207ENST00000495363 AK7Q96M32 723 aa16.37■□□□□ 0.21
SMIM11A-207ENST00000495363 MTFR1LQ9H019 292 aa16.37■□□□□ 0.21
SMIM11A-207ENST00000495363 RSPH6AQ9H0K4 717 aa16.37■□□□□ 0.21
SMIM11A-207ENST00000495363 RNMTO43148 476 aaKnown RBP16.36■□□□□ 0.21
SMIM11A-207ENST00000495363 LINC00116Q8NCU8 138 aa16.36■□□□□ 0.21
SMIM11A-207ENST00000495363 PHACTR3Q96KR7 559 aa16.36■□□□□ 0.21
SMIM11A-207ENST00000495363 C5P01031 1676 aa16.35■□□□□ 0.21
SMIM11A-207ENST00000495363 PTCD1O75127 700 aaKnown RBP16.35■□□□□ 0.21
SMIM11A-207ENST00000495363 PHF14O94880 888 aa16.35■□□□□ 0.21
SMIM11A-207ENST00000495363 HMGB2P26583 209 aaKnown RBP16.35■□□□□ 0.21
SMIM11A-207ENST00000495363 ITPK1Q13572 414 aa16.35■□□□□ 0.21
SMIM11A-207ENST00000495363 SLC52A2Q9HAB3 445 aa16.34■□□□□ 0.21
SMIM11A-207ENST00000495363 GNAT3A8MTJ3 354 aa16.33■□□□□ 0.2
SMIM11A-207ENST00000495363 FCHSD2O94868 740 aa16.33■□□□□ 0.2
SMIM11A-207ENST00000495363 PTGER2P43116 358 aa16.33■□□□□ 0.2
SMIM11A-207ENST00000495363 SMIM5Q71RC9 77 aa16.33■□□□□ 0.2
SMIM11A-207ENST00000495363 COL23A1Q86Y22 540 aaPredicted RBP16.33■□□□□ 0.2
SMIM11A-207ENST00000495363 MAP3K5Q99683 1374 aa16.33■□□□□ 0.2
SMIM11A-207ENST00000495363 NEFMP07197 916 aa16.32■□□□□ 0.2
SMIM11A-207ENST00000495363 SLC39A6Q13433 755 aa16.32■□□□□ 0.2
SMIM11A-207ENST00000495363 SLC4A9Q96Q91 983 aa16.32■□□□□ 0.2
SMIM11A-207ENST00000495363 SCN11AQ9UI33 1791 aa16.32■□□□□ 0.2
SMIM11A-207ENST00000495363 TUBGCP6Q96RT7 1819 aa16.31■□□□□ 0.2
SMIM11A-207ENST00000495363 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
SMIM11A-207ENST00000495363 MYBBP1AQ9BQG0 1328 aaKnown RBP16.31■□□□□ 0.2
SMIM11A-207ENST00000495363 GNPATO15228 680 aa16.31■□□□□ 0.2
SMIM11A-207ENST00000495363 TEFQ10587 303 aa16.31■□□□□ 0.2
SMIM11A-207ENST00000495363 SLC16A10Q8TF71 515 aa16.31■□□□□ 0.2
SMIM11A-207ENST00000495363 TAF1LQ8IZX4 1826 aa16.31■□□□□ 0.2
SMIM11A-207ENST00000495363 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.3■□□□□ 0.2
SMIM11A-207ENST00000495363 ZNF316A6NFI3 1004 aaPredicted RBP16.3■□□□□ 0.2
SMIM11A-207ENST00000495363 POLD1P28340 1107 aa16.3■□□□□ 0.2
SMIM11A-207ENST00000495363 MSL1Q68DK7 614 aa16.3■□□□□ 0.2
SMIM11A-207ENST00000495363 AMIGO3Q86WK7 504 aa16.3■□□□□ 0.2
SMIM11A-207ENST00000495363 KLHL34Q8N239 644 aa16.3■□□□□ 0.2
SMIM11A-207ENST00000495363 IL17REQ8NFR9 667 aa16.3■□□□□ 0.2
SMIM11A-207ENST00000495363 FLAD1Q8NFF5 587 aa16.29■□□□□ 0.2
SMIM11A-207ENST00000495363 RTF1Q92541 710 aaKnown RBP16.29■□□□□ 0.2
SMIM11A-207ENST00000495363 QSER1Q2KHR3 1735 aa16.28■□□□□ 0.2
SMIM11A-207ENST00000495363 ARXQ96QS3 562 aa16.28■□□□□ 0.2
SMIM11A-207ENST00000495363 MCM10Q7L590 875 aa16.27■□□□□ 0.2
SMIM11A-207ENST00000495363 TTC5Q8N0Z6 440 aa16.27■□□□□ 0.2
SMIM11A-207ENST00000495363 SGIP1Q9BQI5 828 aa16.27■□□□□ 0.2
SMIM11A-207ENST00000495363 PRKRIP1Q9H875 184 aaPredicted RBP16.27■□□□□ 0.2
SMIM11A-207ENST00000495363 MRC1P22897 1456 aa16.27■□□□□ 0.19
SMIM11A-207ENST00000495363 VIRMAQ69YN4 1812 aaKnown RBP16.26■□□□□ 0.19
SMIM11A-207ENST00000495363 MAPK8IP3Q9UPT6 1336 aa16.26■□□□□ 0.19
SMIM11A-207ENST00000495363 SSFA2P28290 1259 aa16.26■□□□□ 0.19
SMIM11A-207ENST00000495363 DCTN1Q14203 1278 aa16.26■□□□□ 0.19
SMIM11A-207ENST00000495363 DNAJC10Q8IXB1 793 aa16.26■□□□□ 0.19
SMIM11A-207ENST00000495363 FHDC1Q9C0D6 1143 aaPredicted RBP16.26■□□□□ 0.19
SMIM11A-207ENST00000495363 RTCBQ9Y3I0 505 aaKnown RBP16.26■□□□□ 0.19
SMIM11A-207ENST00000495363 PNNQ9H307 717 aaKnown RBP16.25■□□□□ 0.19
SMIM11A-207ENST00000495363 BTBD11A6QL63 1104 aa16.24■□□□□ 0.19
SMIM11A-207ENST00000495363 CRKLP46109 303 aaKnown RBP16.24■□□□□ 0.19
SMIM11A-207ENST00000495363 TRAPPC3LQ5T215 181 aa16.24■□□□□ 0.19
SMIM11A-207ENST00000495363 ADAMTS7Q9UKP4 1686 aa16.24■□□□□ 0.19
SMIM11A-207ENST00000495363 CNTNAP4Q9C0A0 1308 aa16.23■□□□□ 0.19
SMIM11A-207ENST00000495363 UBR3Q6ZT12 1888 aa16.23■□□□□ 0.19
SMIM11A-207ENST00000495363 WDR43Q15061 677 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMIM11A-207ENST00000495363 RC3H1Q5TC82 1133 aaKnown RBP16.23■□□□□ 0.19
SMIM11A-207ENST00000495363 PLEKHF1Q96S99 279 aa16.23■□□□□ 0.19
SMIM11A-207ENST00000495363 SYT17Q9BSW7 474 aa16.23■□□□□ 0.19
SMIM11A-207ENST00000495363 RPS6KA4O75676 772 aa16.22■□□□□ 0.19
SMIM11A-207ENST00000495363 ZNF790Q6PG37 636 aa16.22■□□□□ 0.19
SMIM11A-207ENST00000495363 CCDC146Q8IYE0 955 aa16.22■□□□□ 0.19
SMIM11A-207ENST00000495363 CEMIPQ8WUJ3 1361 aa16.22■□□□□ 0.19
SMIM11A-207ENST00000495363 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
SMIM11A-207ENST00000495363 KCNQ3O43525 872 aa16.21■□□□□ 0.19
SMIM11A-207ENST00000495363 RFC4P35249 363 aa16.21■□□□□ 0.19
SMIM11A-207ENST00000495363 NFE2L2Q16236 605 aa16.21■□□□□ 0.19
SMIM11A-207ENST00000495363 ARHGEF1Q92888 912 aaKnown RBP16.21■□□□□ 0.19
SMIM11A-207ENST00000495363 ZNF496Q96IT1 587 aaPredicted RBP16.21■□□□□ 0.19
SMIM11A-207ENST00000495363 KCPQ6ZWJ8 1503 aa16.2■□□□□ 0.18
SMIM11A-207ENST00000495363 COL5A3P25940 1745 aaPredicted RBP16.2■□□□□ 0.18
SMIM11A-207ENST00000495363 TJP1Q07157 1748 aa16.2■□□□□ 0.18
SMIM11A-207ENST00000495363 HTATSF1O43719 755 aaKnown RBP16.2■□□□□ 0.18
SMIM11A-207ENST00000495363 CCDC87Q9NVE4 849 aa16.2■□□□□ 0.18
SMIM11A-207ENST00000495363 ZNF831Q5JPB2 1677 aa16.2■□□□□ 0.18
SMIM11A-207ENST00000495363 CYP19A1P11511 503 aaPredicted RBP16.19■□□□□ 0.18
SMIM11A-207ENST00000495363 INTS5Q6P9B9 1019 aaKnown RBP16.19■□□□□ 0.18
SMIM11A-207ENST00000495363 VSIG10Q8N0Z9 540 aa16.19■□□□□ 0.18
SMIM11A-207ENST00000495363 FMNL2Q96PY5 1086 aa16.19■□□□□ 0.18
SMIM11A-207ENST00000495363 THUMPD2Q9BTF0 503 aaKnown RBP16.19■□□□□ 0.18
SMIM11A-207ENST00000495363 MIS18AQ9NYP9 233 aa16.19■□□□□ 0.18
SMIM11A-207ENST00000495363 ADRA2BP18089 450 aa16.18■□□□□ 0.18
SMIM11A-207ENST00000495363 CANXP27824 592 aaKnown RBP16.18■□□□□ 0.18
SMIM11A-207ENST00000495363 NEUROD2Q15784 382 aa16.18■□□□□ 0.18
SMIM11A-207ENST00000495363 ZBTB1Q9Y2K1 713 aa16.18■□□□□ 0.18
SMIM11A-207ENST00000495363 RRP7AQ9Y3A4 280 aaKnown RBP16.18■□□□□ 0.18
SMIM11A-207ENST00000495363 HEG1Q9ULI3 1381 aa16.17■□□□□ 0.18
SMIM11A-207ENST00000495363 MYH14Q7Z406 1995 aaKnown RBP16.17■□□□□ 0.18
SMIM11A-207ENST00000495363 STARD3NLO95772 234 aa16.17■□□□□ 0.18
SMIM11A-207ENST00000495363 RIPK4P57078 832 aa16.17■□□□□ 0.18
SMIM11A-207ENST00000495363 TAF7Q15545 349 aaPredicted RBP16.17■□□□□ 0.18
SMIM11A-207ENST00000495363 SRP68Q9UHB9 627 aaKnown RBP16.17■□□□□ 0.18
SMIM11A-207ENST00000495363 ADAMTS8Q9UP79 889 aa16.17■□□□□ 0.18
SMIM11A-207ENST00000495363 ZNF330Q9Y3S2 320 aaPredicted RBP16.17■□□□□ 0.18
SMIM11A-207ENST00000495363 SIPA1L3O60292 1781 aaPredicted RBP16.16■□□□□ 0.18
SMIM11A-207ENST00000495363 ANP32CO43423 234 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms