RNA–Protein interactions for RNA: ENST00000495311.1

POLR2B-210, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-210ENST00000495311 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
POLR2B-210ENST00000495311 TMPOP42166 694 aaKnown RBP14.84□□□□□ -0.03
POLR2B-210ENST00000495311 C1orf141Q5JVX7 400 aa14.84□□□□□ -0.03
POLR2B-210ENST00000495311 GNAT3A8MTJ3 354 aa14.83□□□□□ -0.04
POLR2B-210ENST00000495311 ZNF827Q17R98 1081 aa14.83□□□□□ -0.04
POLR2B-210ENST00000495311 FAM9BQ8IZU0 186 aa14.83□□□□□ -0.04
POLR2B-210ENST00000495311 SYT17Q9BSW7 474 aa14.83□□□□□ -0.04
POLR2B-210ENST00000495311 FHDC1Q9C0D6 1143 aaPredicted RBP14.83□□□□□ -0.04
POLR2B-210ENST00000495311 MAPK8IP3Q9UPT6 1336 aa14.83□□□□□ -0.04
POLR2B-210ENST00000495311 ERVV-2B6SEH9 535 aa14.82□□□□□ -0.04
POLR2B-210ENST00000495311 ZNF784Q8NCA9 323 aaPredicted RBP14.82□□□□□ -0.04
POLR2B-210ENST00000495311 MAP3K5Q99683 1374 aa14.82□□□□□ -0.04
POLR2B-210ENST00000495311 CCDC27Q2M243 656 aa14.81□□□□□ -0.04
POLR2B-210ENST00000495311 CCDC146Q8IYE0 955 aa14.81□□□□□ -0.04
POLR2B-210ENST00000495311 LRRC4BQ9NT99 713 aa14.81□□□□□ -0.04
POLR2B-210ENST00000495311 CEMIPQ8WUJ3 1361 aa14.81□□□□□ -0.04
POLR2B-210ENST00000495311 APAF1O14727 1248 aa14.8□□□□□ -0.04
POLR2B-210ENST00000495311 RNMTO43148 476 aaKnown RBP14.8□□□□□ -0.04
POLR2B-210ENST00000495311 IL17REQ8NFR9 667 aa14.8□□□□□ -0.04
POLR2B-210ENST00000495311 TAF1LQ8IZX4 1826 aa14.8□□□□□ -0.04
POLR2B-210ENST00000495311 RIPK4P57078 832 aa14.79□□□□□ -0.04
POLR2B-210ENST00000495311 LMOD3Q0VAK6 560 aa14.79□□□□□ -0.04
POLR2B-210ENST00000495311 ACSBG1Q96GR2 724 aa14.79□□□□□ -0.04
POLR2B-210ENST00000495311 MTFR1LQ9H019 292 aa14.79□□□□□ -0.04
POLR2B-210ENST00000495311 LGR6Q9HBX8 967 aa14.79□□□□□ -0.04
POLR2B-210ENST00000495311 STK32BQ9NY57 414 aa14.79□□□□□ -0.04
POLR2B-210ENST00000495311 KDM6AO15550 1401 aaPredicted RBP14.78□□□□□ -0.04
POLR2B-210ENST00000495311 MPRIPQ6WCQ1 1025 aa14.78□□□□□ -0.04
POLR2B-210ENST00000495311 TRIM35Q9UPQ4 493 aa14.78□□□□□ -0.04
POLR2B-210ENST00000495311 ADAMTS7Q9UKP4 1686 aa14.77□□□□□ -0.04
POLR2B-210ENST00000495311 PRIM1P49642 420 aaKnown RBP14.77□□□□□ -0.05
POLR2B-210ENST00000495311 RTF1Q92541 710 aaKnown RBP14.77□□□□□ -0.05
POLR2B-210ENST00000495311 TOGARAM1Q9Y4F4 1720 aa14.77□□□□□ -0.05
POLR2B-210ENST00000495311 AKT1S1Q96B36 256 aa14.76□□□□□ -0.05
POLR2B-210ENST00000495311 SLC52A2Q9HAB3 445 aa14.76□□□□□ -0.05
POLR2B-210ENST00000495311 C5P01031 1676 aa14.75□□□□□ -0.05
POLR2B-210ENST00000495311 BABAM1Q9NWV8 329 aa14.75□□□□□ -0.05
POLR2B-210ENST00000495311 MRC1P22897 1456 aa14.75□□□□□ -0.05
POLR2B-210ENST00000495311 ITGB4P16144 1822 aa14.74□□□□□ -0.05
POLR2B-210ENST00000495311 CABP4P57796 275 aa14.74□□□□□ -0.05
POLR2B-210ENST00000495311 NFATC2IPQ8NCF5 419 aa14.74□□□□□ -0.05
POLR2B-210ENST00000495311 PIGBQ92521 554 aa14.74□□□□□ -0.05
POLR2B-210ENST00000495311 RRP7AQ9Y3A4 280 aaKnown RBP14.74□□□□□ -0.05
POLR2B-210ENST00000495311 PNPLA7Q6ZV29 1317 aa14.73□□□□□ -0.05
POLR2B-210ENST00000495311 TAF7Q15545 349 aaPredicted RBP14.73□□□□□ -0.05
POLR2B-210ENST00000495311 MCM10Q7L590 875 aa14.73□□□□□ -0.05
POLR2B-210ENST00000495311 WWC1Q8IX03 1113 aa14.73□□□□□ -0.05
POLR2B-210ENST00000495311 ARXQ96QS3 562 aa14.73□□□□□ -0.05
POLR2B-210ENST00000495311 ZNF521Q96K83 1311 aa14.72□□□□□ -0.05
POLR2B-210ENST00000495311 CALD1Q05682 793 aaKnown RBP14.72□□□□□ -0.05
POLR2B-210ENST00000495311 NEUROD2Q15784 382 aa14.72□□□□□ -0.05
POLR2B-210ENST00000495311 WDR63Q8IWG1 891 aa14.72□□□□□ -0.05
POLR2B-210ENST00000495311 TMOD3Q9NYL9 352 aa14.72□□□□□ -0.05
POLR2B-210ENST00000495311 IL16Q14005 1332 aa14.71□□□□□ -0.05
POLR2B-210ENST00000495311 ZNF853P0CG23 659 aa14.71□□□□□ -0.05
POLR2B-210ENST00000495311 KCNQ4P56696 695 aa14.71□□□□□ -0.05
POLR2B-210ENST00000495311 TEFQ10587 303 aa14.71□□□□□ -0.05
POLR2B-210ENST00000495311 DCTN1Q14203 1278 aa14.71□□□□□ -0.05
POLR2B-210ENST00000495311 SMARCC1Q92922 1105 aaPredicted RBP14.71□□□□□ -0.05
POLR2B-210ENST00000495311 UBR3Q6ZT12 1888 aa14.71□□□□□ -0.05
POLR2B-210ENST00000495311 DCAF8L1A6NGE4 600 aa14.69□□□□□ -0.06
POLR2B-210ENST00000495311 CHL1O00533 1208 aa14.69□□□□□ -0.06
POLR2B-210ENST00000495311 SYTL4Q96C24 671 aaPredicted RBP14.69□□□□□ -0.06
POLR2B-210ENST00000495311 ATG3Q9NT62 314 aa14.69□□□□□ -0.06
POLR2B-210ENST00000495311 SCN11AQ9UI33 1791 aa14.69□□□□□ -0.06
POLR2B-210ENST00000495311 NLGN2Q8NFZ4 835 aa14.68□□□□□ -0.06
POLR2B-210ENST00000495311 CFAP44Q96MT7 982 aa14.68□□□□□ -0.06
POLR2B-210ENST00000495311 THUMPD2Q9BTF0 503 aaKnown RBP14.68□□□□□ -0.06
POLR2B-210ENST00000495311 IFT57Q9NWB7 429 aa14.68□□□□□ -0.06
POLR2B-210ENST00000495311 ASAP1Q9ULH1 1129 aa14.68□□□□□ -0.06
POLR2B-210ENST00000495311 BTBD11A6QL63 1104 aa14.67□□□□□ -0.06
POLR2B-210ENST00000495311 HMGB2P26583 209 aaKnown RBP14.67□□□□□ -0.06
POLR2B-210ENST00000495311 ZNF790Q6PG37 636 aa14.67□□□□□ -0.06
POLR2B-210ENST00000495311 C1QTNF8P60827 252 aa14.66□□□□□ -0.06
POLR2B-210ENST00000495311 GNAI1P63096 354 aa14.66□□□□□ -0.06
POLR2B-210ENST00000495311 PCNTO95613 3336 aa14.66□□□□□ -0.06
POLR2B-210ENST00000495311 DLG5Q8TDM6 1919 aa14.66□□□□□ -0.06
POLR2B-210ENST00000495311 HEG1Q9ULI3 1381 aa14.65□□□□□ -0.06
POLR2B-210ENST00000495311 SLC27A3Q5K4L6 730 aa14.65□□□□□ -0.06
POLR2B-210ENST00000495311 VSIG10Q8N0Z9 540 aa14.65□□□□□ -0.06
POLR2B-210ENST00000495311 KIAA1551Q9HCM1 1747 aa14.65□□□□□ -0.06
POLR2B-210ENST00000495311 C4BP0C0L5 1744 aa14.64□□□□□ -0.07
POLR2B-210ENST00000495311 YBX3P16989 372 aaKnown RBP eCLIP14.64□□□□□ -0.07
POLR2B-210ENST00000495311 SLC16A10Q8TF71 515 aa14.64□□□□□ -0.07
POLR2B-210ENST00000495311 PALLDQ8WX93 1383 aa14.63□□□□□ -0.07
POLR2B-210ENST00000495311 SLC39A6Q13433 755 aa14.63□□□□□ -0.07
POLR2B-210ENST00000495311 TRMT2AQ8IZ69 625 aaKnown RBP14.63□□□□□ -0.07
POLR2B-210ENST00000495311 SIPA1L3O60292 1781 aaPredicted RBP14.62□□□□□ -0.07
POLR2B-210ENST00000495311 LOC102724428A0A0B4J2F2 783 aa14.62□□□□□ -0.07
POLR2B-210ENST00000495311 SIK1P57059 783 aa14.62□□□□□ -0.07
POLR2B-210ENST00000495311 EIF4A1P60842 406 aaKnown RBP14.62□□□□□ -0.07
POLR2B-210ENST00000495311 HNRNPUQ00839 825 aaKnown RBP eCLIP14.62□□□□□ -0.07
POLR2B-210ENST00000495311 GOLGA2Q08379 1002 aa14.62□□□□□ -0.07
POLR2B-210ENST00000495311 TTC5Q8N0Z6 440 aa14.62□□□□□ -0.07
POLR2B-210ENST00000495311 ZNF496Q96IT1 587 aaPredicted RBP14.62□□□□□ -0.07
POLR2B-210ENST00000495311 SLC4A9Q96Q91 983 aa14.62□□□□□ -0.07
POLR2B-210ENST00000495311 MIS18AQ9NYP9 233 aa14.62□□□□□ -0.07
POLR2B-210ENST00000495311 TSPYL4Q9UJ04 414 aa14.62□□□□□ -0.07
POLR2B-210ENST00000495311 SALL2Q9Y467 1007 aaPredicted RBP14.62□□□□□ -0.07
POLR2B-210ENST00000495311 ZBED9Q6R2W3 1325 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms