RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 TMOD3Q9NYL9 352 aa17.57■□□□□ 0.4
APTX-231ENST00000494973 TSPYL4Q9UJ04 414 aa17.57■□□□□ 0.4
APTX-231ENST00000494973 RGS12O14924 1447 aa17.56■□□□□ 0.4
APTX-231ENST00000494973 TOGARAM1Q9Y4F4 1720 aa17.56■□□□□ 0.4
APTX-231ENST00000494973 SOS1Q07889 1333 aaPredicted RBP17.56■□□□□ 0.4
APTX-231ENST00000494973 CT47B1P0C2W7 299 aaPredicted RBP17.56■□□□□ 0.4
APTX-231ENST00000494973 LAS1LQ9Y4W2 734 aaKnown RBP17.56■□□□□ 0.4
APTX-231ENST00000494973 KDM3BQ7LBC6 1761 aa17.56■□□□□ 0.4
APTX-231ENST00000494973 FANCIQ9NVI1 1328 aa17.55■□□□□ 0.4
APTX-231ENST00000494973 BTBD11A6QL63 1104 aa17.55■□□□□ 0.4
APTX-231ENST00000494973 POTEAQ6S8J7 498 aa17.55■□□□□ 0.4
APTX-231ENST00000494973 TRMT2AQ8IZ69 625 aaKnown RBP17.55■□□□□ 0.4
APTX-231ENST00000494973 DUSP27Q5VZP5 1158 aa17.54■□□□□ 0.4
APTX-231ENST00000494973 FAM196AQ6ZSG2 479 aa17.54■□□□□ 0.4
APTX-231ENST00000494973 TTC5Q8N0Z6 440 aa17.54■□□□□ 0.4
APTX-231ENST00000494973 NHSQ6T4R5 1651 aa17.54■□□□□ 0.4
APTX-231ENST00000494973 ITGB4P16144 1822 aa17.54■□□□□ 0.4
APTX-231ENST00000494973 BRWD3Q6RI45 1802 aa17.54■□□□□ 0.4
APTX-231ENST00000494973 ZNF428Q96B54 188 aa17.53■□□□□ 0.4
APTX-231ENST00000494973 CDCA7LQ96GN5 454 aa17.53■□□□□ 0.4
APTX-231ENST00000494973 MBIPQ9NS73 344 aa17.53■□□□□ 0.4
APTX-231ENST00000494973 PAPPAQ13219 1627 aa17.53■□□□□ 0.4
APTX-231ENST00000494973 NFATC2IPQ8NCF5 419 aa17.52■□□□□ 0.4
APTX-231ENST00000494973 HOXB7P09629 217 aa17.5■□□□□ 0.39
APTX-231ENST00000494973 ZNF790Q6PG37 636 aa17.5■□□□□ 0.39
APTX-231ENST00000494973 SMARCC1Q92922 1105 aaPredicted RBP17.5■□□□□ 0.39
APTX-231ENST00000494973 TSR2Q969E8 191 aaKnown RBP17.5■□□□□ 0.39
APTX-231ENST00000494973 SYTL4Q96C24 671 aaPredicted RBP17.5■□□□□ 0.39
APTX-231ENST00000494973 SPINK5Q9NQ38 1064 aaPredicted RBP17.5■□□□□ 0.39
APTX-231ENST00000494973 KAT6BQ8WYB5 2073 aa17.5■□□□□ 0.39
APTX-231ENST00000494973 HMGB2P26583 209 aaKnown RBP17.49■□□□□ 0.39
APTX-231ENST00000494973 PRIM1P49642 420 aaKnown RBP17.49■□□□□ 0.39
APTX-231ENST00000494973 UBR2Q8IWV8 1755 aa17.48■□□□□ 0.39
APTX-231ENST00000494973 FMNL2Q96PY5 1086 aa17.48■□□□□ 0.39
APTX-231ENST00000494973 SBF2Q86WG5 1849 aa17.48■□□□□ 0.39
APTX-231ENST00000494973 PIGBQ92521 554 aa17.47■□□□□ 0.39
APTX-231ENST00000494973 EXOSC9Q06265 439 aaKnown RBP17.46■□□□□ 0.39
APTX-231ENST00000494973 BCL11BQ9C0K0 894 aaPredicted RBP17.46■□□□□ 0.39
APTX-231ENST00000494973 EIF4A1P60842 406 aaKnown RBP17.45■□□□□ 0.38
APTX-231ENST00000494973 TWISTNBQ3B726 338 aaPredicted RBP17.45■□□□□ 0.38
APTX-231ENST00000494973 VSIG10Q8N0Z9 540 aa17.45■□□□□ 0.38
APTX-231ENST00000494973 ACSBG1Q96GR2 724 aa17.45■□□□□ 0.38
APTX-231ENST00000494973 MIS18AQ9NYP9 233 aa17.45■□□□□ 0.38
APTX-231ENST00000494973 KCPQ6ZWJ8 1503 aa17.44■□□□□ 0.38
APTX-231ENST00000494973 TEX13AQ9BXU3 409 aaPredicted RBP17.44■□□□□ 0.38
APTX-231ENST00000494973 ZNF831Q5JPB2 1677 aa17.44■□□□□ 0.38
APTX-231ENST00000494973 BTAF1O14981 1849 aa17.44■□□□□ 0.38
APTX-231ENST00000494973 CICQ96RK0 1608 aaPredicted RBP17.43■□□□□ 0.38
APTX-231ENST00000494973 LAMB4A4D0S4 1761 aa17.43■□□□□ 0.38
APTX-231ENST00000494973 HEG1Q9ULI3 1381 aa17.43■□□□□ 0.38
APTX-231ENST00000494973 SNRPA1P09661 255 aaKnown RBP17.43■□□□□ 0.38
APTX-231ENST00000494973 PALLDQ8WX93 1383 aa17.42■□□□□ 0.38
APTX-231ENST00000494973 SLC39A6Q13433 755 aa17.42■□□□□ 0.38
APTX-231ENST00000494973 ALDH1L2Q3SY69 923 aa17.42■□□□□ 0.38
APTX-231ENST00000494973 ATG3Q9NT62 314 aa17.42■□□□□ 0.38
APTX-231ENST00000494973 RCAN3Q9UKA8 241 aa17.42■□□□□ 0.38
APTX-231ENST00000494973 ZNF496Q96IT1 587 aaPredicted RBP17.41■□□□□ 0.38
APTX-231ENST00000494973 GIGYF1O75420 1035 aaPredicted RBP17.4■□□□□ 0.38
APTX-231ENST00000494973 CCDC30Q5VVM6 783 aa17.4■□□□□ 0.38
APTX-231ENST00000494973 C8orf58Q8NAV2 365 aa17.4■□□□□ 0.38
APTX-231ENST00000494973 STK31Q9BXU1 1019 aa17.4■□□□□ 0.38
APTX-231ENST00000494973 ASAP1Q9ULH1 1129 aa17.4■□□□□ 0.38
APTX-231ENST00000494973 CACNA1FO60840 1977 aa17.4■□□□□ 0.38
APTX-231ENST00000494973 ERBB4Q15303 1308 aa17.4■□□□□ 0.38
APTX-231ENST00000494973 RGPD3A6NKT7 1758 aaPredicted RBP17.39■□□□□ 0.37
APTX-231ENST00000494973 RGPD4Q7Z3J3 1758 aa17.39■□□□□ 0.37
APTX-231ENST00000494973 KCNQ2O43526 872 aa17.39■□□□□ 0.37
APTX-231ENST00000494973 VAMP4O75379 141 aa17.39■□□□□ 0.37
APTX-231ENST00000494973 FAM182BQ5T319 152 aa17.39■□□□□ 0.37
APTX-231ENST00000494973 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.39■□□□□ 0.37
APTX-231ENST00000494973 KCNQ3O43525 872 aa17.38■□□□□ 0.37
APTX-231ENST00000494973 HDGFL1Q5TGJ6 251 aa17.38■□□□□ 0.37
APTX-231ENST00000494973 KIF16BQ96L93 1317 aa17.38■□□□□ 0.37
APTX-231ENST00000494973 LOC102724428A0A0B4J2F2 783 aa17.37■□□□□ 0.37
APTX-231ENST00000494973 PTCD1O75127 700 aaKnown RBP17.37■□□□□ 0.37
APTX-231ENST00000494973 TRIM37O94972 964 aa17.37■□□□□ 0.37
APTX-231ENST00000494973 STARD3NLO95772 234 aa17.37■□□□□ 0.37
APTX-231ENST00000494973 SIK1P57059 783 aa17.37■□□□□ 0.37
APTX-231ENST00000494973 TSPYL6Q8N831 410 aa17.37■□□□□ 0.37
APTX-231ENST00000494973 RBM42Q9BTD8 480 aaKnown RBP17.37■□□□□ 0.37
APTX-231ENST00000494973 LY75O60449 1722 aa17.37■□□□□ 0.37
APTX-231ENST00000494973 C5P01031 1676 aa17.36■□□□□ 0.37
APTX-231ENST00000494973 ELL2O00472 640 aaPredicted RBP17.36■□□□□ 0.37
APTX-231ENST00000494973 RARSP54136 660 aaKnown RBP17.36■□□□□ 0.37
APTX-231ENST00000494973 BRPF1P55201 1214 aaPredicted RBP17.36■□□□□ 0.37
APTX-231ENST00000494973 SMC4Q9NTJ3 1288 aa17.36■□□□□ 0.37
APTX-231ENST00000494973 SF3B2Q13435 895 aaKnown RBP17.35■□□□□ 0.37
APTX-231ENST00000494973 KRT24Q2M2I5 525 aa17.35■□□□□ 0.37
APTX-231ENST00000494973 SLC27A3Q5K4L6 730 aa17.35■□□□□ 0.37
APTX-231ENST00000494973 CCDC125Q86Z20 511 aa17.35■□□□□ 0.37
APTX-231ENST00000494973 DBF4Q9UBU7 674 aaPredicted RBP17.35■□□□□ 0.37
APTX-231ENST00000494973 TNS1Q9HBL0 1735 aaKnown RBP17.35■□□□□ 0.37
APTX-231ENST00000494973 TJP1Q07157 1748 aa17.34■□□□□ 0.37
APTX-231ENST00000494973 PLSCR1O15162 318 aa17.33■□□□□ 0.36
APTX-231ENST00000494973 IPO8O15397 1037 aaKnown RBP17.33■□□□□ 0.36
APTX-231ENST00000494973 ATP6V1AP38606 617 aa17.33■□□□□ 0.36
APTX-231ENST00000494973 MS4A1P11836 297 aa17.32■□□□□ 0.36
APTX-231ENST00000494973 EIF2S2P20042 333 aaKnown RBP17.32■□□□□ 0.36
APTX-231ENST00000494973 HYPKQ9NX55 129 aa17.32■□□□□ 0.36
APTX-231ENST00000494973 CCNL1Q9UK58 526 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms