RNA–Protein interactions for RNA: ENST00000494877.5

GABBR1-220, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-220ENST00000494877 LMO7Q8WWI1 1683 aa21.45■■□□□ 1.02
GABBR1-220ENST00000494877 USP35Q9P2H5 1018 aa21.45■■□□□ 1.02
GABBR1-220ENST00000494877 ALS2Q96Q42 1657 aa21.45■■□□□ 1.02
GABBR1-220ENST00000494877 MFAP1P55081 439 aaKnown RBP21.45■■□□□ 1.02
GABBR1-220ENST00000494877 FKBP5Q13451 457 aaPredicted RBP21.45■■□□□ 1.02
GABBR1-220ENST00000494877 C22orf23Q9BZE7 217 aa21.45■■□□□ 1.02
GABBR1-220ENST00000494877 AXIN2Q9Y2T1 843 aa21.44■■□□□ 1.02
GABBR1-220ENST00000494877 NECTIN2Q92692 538 aa21.43■■□□□ 1.02
GABBR1-220ENST00000494877 DDX17Q92841 729 aaKnown RBP21.43■■□□□ 1.02
GABBR1-220ENST00000494877 HOXB7P09629 217 aa21.43■■□□□ 1.02
GABBR1-220ENST00000494877 HDGFL1Q5TGJ6 251 aa21.43■■□□□ 1.02
GABBR1-220ENST00000494877 CHMP4AQ9BY43 222 aa21.43■■□□□ 1.02
GABBR1-220ENST00000494877 CAMTA1Q9Y6Y1 1673 aa21.43■■□□□ 1.02
GABBR1-220ENST00000494877 EIF4A1P60842 406 aaKnown RBP21.42■■□□□ 1.02
GABBR1-220ENST00000494877 TEFQ10587 303 aa21.42■■□□□ 1.02
GABBR1-220ENST00000494877 C1orf141Q5JVX7 400 aa21.42■■□□□ 1.02
GABBR1-220ENST00000494877 HMMRO75330 724 aa21.41■■□□□ 1.02
GABBR1-220ENST00000494877 KDM3BQ7LBC6 1761 aa21.41■■□□□ 1.02
GABBR1-220ENST00000494877 OVOS2A0A0G2JMS6 1433 aa21.4■■□□□ 1.02
GABBR1-220ENST00000494877 GNAI2P04899 355 aa21.4■■□□□ 1.02
GABBR1-220ENST00000494877 MPRIPQ6WCQ1 1025 aa21.39■■□□□ 1.02
GABBR1-220ENST00000494877 PLEKHM2Q8IWE5 1019 aa21.39■■□□□ 1.02
GABBR1-220ENST00000494877 ERBB3P21860 1342 aa21.39■■□□□ 1.02
GABBR1-220ENST00000494877 BTBD11A6QL63 1104 aa21.39■■□□□ 1.01
GABBR1-220ENST00000494877 GNAI3P08754 354 aa21.39■■□□□ 1.01
GABBR1-220ENST00000494877 ZC3H6P61129 1189 aaKnown RBP21.39■■□□□ 1.01
GABBR1-220ENST00000494877 PXDNLA1KZ92 1463 aa21.38■■□□□ 1.01
GABBR1-220ENST00000494877 RGPD5Q99666 1765 aa21.38■■□□□ 1.01
GABBR1-220ENST00000494877 RNMTO43148 476 aaKnown RBP21.38■■□□□ 1.01
GABBR1-220ENST00000494877 NPHP3Q7Z494 1330 aa21.38■■□□□ 1.01
GABBR1-220ENST00000494877 PXDNQ92626 1479 aa21.37■■□□□ 1.01
GABBR1-220ENST00000494877 N4BP2Q86UW6 1770 aaPredicted RBP21.37■■□□□ 1.01
GABBR1-220ENST00000494877 EIF5BO60841 1220 aaKnown RBP21.36■■□□□ 1.01
GABBR1-220ENST00000494877 RBM25P49756 843 aaKnown RBP21.36■■□□□ 1.01
GABBR1-220ENST00000494877 TBC1D2Q9BYX2 928 aa21.36■■□□□ 1.01
GABBR1-220ENST00000494877 EIF2S2P20042 333 aaKnown RBP21.35■■□□□ 1.01
GABBR1-220ENST00000494877 KCNQ3O43525 872 aa21.34■■□□□ 1.01
GABBR1-220ENST00000494877 TBC1D9Q6ZT07 1266 aa21.34■■□□□ 1.01
GABBR1-220ENST00000494877 PHAXQ9H814 394 aaKnown RBP21.34■■□□□ 1.01
GABBR1-220ENST00000494877 GSPT1P15170 499 aaKnown RBP21.33■■□□□ 1.01
GABBR1-220ENST00000494877 TTC22Q5TAA0 569 aa21.33■■□□□ 1.01
GABBR1-220ENST00000494877 C16orf71Q8IYS4 520 aaPredicted RBP21.33■■□□□ 1.01
GABBR1-220ENST00000494877 TNS3Q68CZ2 1445 aa21.33■■□□□ 1.01
GABBR1-220ENST00000494877 CDC45O75419 566 aa21.33■■□□□ 1
GABBR1-220ENST00000494877 NFKBIBQ15653 356 aa21.33■■□□□ 1
GABBR1-220ENST00000494877 XIRP1Q702N8 1843 aaKnown RBP21.33■■□□□ 1
GABBR1-220ENST00000494877 CHPF2Q9P2E5 772 aa21.32■■□□□ 1
GABBR1-220ENST00000494877 ATP8B2P98198 1209 aa21.31■■□□□ 1
GABBR1-220ENST00000494877 BRINP3Q76B58 766 aa21.31■■□□□ 1
GABBR1-220ENST00000494877 RAPGEF4Q8WZA2 1011 aa21.31■■□□□ 1
GABBR1-220ENST00000494877 USP44Q9H0E7 712 aa21.31■■□□□ 1
GABBR1-220ENST00000494877 SLAIN2Q9P270 581 aa21.31■■□□□ 1
GABBR1-220ENST00000494877 APBB1O00213 710 aa21.31■■□□□ 1
GABBR1-220ENST00000494877 SMARCA5O60264 1052 aaPredicted RBP21.31■■□□□ 1
GABBR1-220ENST00000494877 NLRP2Q9NX02 1062 aa21.31■■□□□ 1
GABBR1-220ENST00000494877 COL18A1P39060 1754 aa21.3■■□□□ 1
GABBR1-220ENST00000494877 ADAMTS7Q9UKP4 1686 aa21.3■■□□□ 1
GABBR1-220ENST00000494877 DEKP35659 375 aaKnown RBP21.3■■□□□ 1
GABBR1-220ENST00000494877 OTUD7AQ8TE49 926 aaPredicted RBP21.3■■□□□ 1
GABBR1-220ENST00000494877 SPATA31A3Q5VYP0 1347 aa21.29■■□□□ 1
GABBR1-220ENST00000494877 HEG1Q9ULI3 1381 aa21.29■■□□□ 1
GABBR1-220ENST00000494877 SIPA1L3O60292 1781 aaPredicted RBP21.29■■□□□ 1
GABBR1-220ENST00000494877 UBTFL1P0CB47 393 aaPredicted RBP21.29■■□□□ 1
GABBR1-220ENST00000494877 SRCIN1Q9C0H9 1055 aa21.29■■□□□ 1
GABBR1-220ENST00000494877 ABCC6O95255 1503 aa21.28■■□□□ 1
GABBR1-220ENST00000494877 GIGYF1O75420 1035 aaPredicted RBP21.28■■□□□ 1
GABBR1-220ENST00000494877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.28■■□□□ 1
GABBR1-220ENST00000494877 DBF4Q9UBU7 674 aaPredicted RBP21.28■■□□□ 1
GABBR1-220ENST00000494877 LRRFIP2Q9Y608 721 aaKnown RBP21.28■■□□□ 1
GABBR1-220ENST00000494877 CABLES1Q8TDN4 633 aa21.28■■□□□ 1
GABBR1-220ENST00000494877 TATP17735 454 aaPredicted RBP21.27■■□□□ 1
GABBR1-220ENST00000494877 UBE2Q2Q8WVN8 375 aa21.27■■□□□ 1
GABBR1-220ENST00000494877 ANO8Q9HCE9 1232 aaPredicted RBP21.27■■□□□ 1
GABBR1-220ENST00000494877 PNMA6EA0A0J9YXQ4 647 aa21.26■□□□□ 0.99
GABBR1-220ENST00000494877 DNAAF4Q8WXU2 420 aa21.26■□□□□ 0.99
GABBR1-220ENST00000494877 OSBPL3Q9H4L5 887 aa21.26■□□□□ 0.99
GABBR1-220ENST00000494877 ANTXR1Q9H6X2 564 aa21.26■□□□□ 0.99
GABBR1-220ENST00000494877 SPG7Q9UQ90 795 aa21.26■□□□□ 0.99
GABBR1-220ENST00000494877 CRYBG1Q9Y4K1 1723 aa21.26■□□□□ 0.99
GABBR1-220ENST00000494877 PLEKHG2Q9H7P9 1386 aa21.26■□□□□ 0.99
GABBR1-220ENST00000494877 EXOC6BQ9Y2D4 811 aa21.26■□□□□ 0.99
GABBR1-220ENST00000494877 PI4KAP2A4QPH2 592 aa21.25■□□□□ 0.99
GABBR1-220ENST00000494877 PI4KAP1Q8N8J0 262 aa21.25■□□□□ 0.99
GABBR1-220ENST00000494877 SLKQ9H2G2 1235 aaPredicted RBP21.25■□□□□ 0.99
GABBR1-220ENST00000494877 CPDO75976 1380 aa21.25■□□□□ 0.99
GABBR1-220ENST00000494877 CSB-PGBD3P0DP91 1061 aa21.25■□□□□ 0.99
GABBR1-220ENST00000494877 BEND3Q5T5X7 828 aa21.24■□□□□ 0.99
GABBR1-220ENST00000494877 LRRCC1Q9C099 1032 aa21.24■□□□□ 0.99
GABBR1-220ENST00000494877 SDSP20132 328 aa21.24■□□□□ 0.99
GABBR1-220ENST00000494877 CHRNA2Q15822 529 aa21.23■□□□□ 0.99
GABBR1-220ENST00000494877 HSCBQ8IWL3 235 aa21.23■□□□□ 0.99
GABBR1-220ENST00000494877 SNX21Q969T3 373 aa21.23■□□□□ 0.99
GABBR1-220ENST00000494877 IBTKQ9P2D0 1353 aaPredicted RBP21.23■□□□□ 0.99
GABBR1-220ENST00000494877 ANXA1P04083 346 aa21.23■□□□□ 0.99
GABBR1-220ENST00000494877 PHKG2P15735 406 aa21.23■□□□□ 0.99
GABBR1-220ENST00000494877 PDE1AP54750 535 aa21.23■□□□□ 0.99
GABBR1-220ENST00000494877 SCN11AQ9UI33 1791 aa21.22■□□□□ 0.99
GABBR1-220ENST00000494877 SSH3Q8TE77 659 aa21.22■□□□□ 0.99
GABBR1-220ENST00000494877 ADCY9O60503 1353 aa21.22■□□□□ 0.99
GABBR1-220ENST00000494877 MEGF6O75095 1541 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms