RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 LTV1Q96GA3 475 aaPredicted RBP14.03□□□□□ -0.16
LDHA-211ENST00000494573 STK31Q9BXU1 1019 aa14.03□□□□□ -0.16
LDHA-211ENST00000494573 ABCC6O95255 1503 aa14.03□□□□□ -0.16
LDHA-211ENST00000494573 COL18A1P39060 1754 aa14.02□□□□□ -0.16
LDHA-211ENST00000494573 EIF5BO60841 1220 aaKnown RBP14.02□□□□□ -0.17
LDHA-211ENST00000494573 SLC4A3P48751 1232 aa14.02□□□□□ -0.17
LDHA-211ENST00000494573 IL17REQ8NFR9 667 aa14.02□□□□□ -0.17
LDHA-211ENST00000494573 MIS18AQ9NYP9 233 aa14.02□□□□□ -0.17
LDHA-211ENST00000494573 SCN11AQ9UI33 1791 aa14.01□□□□□ -0.17
LDHA-211ENST00000494573 CEP85Q6P2H3 762 aa14.01□□□□□ -0.17
LDHA-211ENST00000494573 PROSER2Q86WR7 435 aaPredicted RBP14.01□□□□□ -0.17
LDHA-211ENST00000494573 C22orf23Q9BZE7 217 aa14.01□□□□□ -0.17
LDHA-211ENST00000494573 XIRP1Q702N8 1843 aaKnown RBP14.01□□□□□ -0.17
LDHA-211ENST00000494573 NBPF6Q5VWK0 638 aa14□□□□□ -0.17
LDHA-211ENST00000494573 POTEHQ6S545 545 aa14□□□□□ -0.17
LDHA-211ENST00000494573 ARHGEF25Q86VW2 580 aa14□□□□□ -0.17
LDHA-211ENST00000494573 RBM33Q96EV2 1170 aaKnown RBP14□□□□□ -0.17
LDHA-211ENST00000494573 NBPF4Q96M43 638 aa14□□□□□ -0.17
LDHA-211ENST00000494573 ORAI2Q96SN7 254 aa14□□□□□ -0.17
LDHA-211ENST00000494573 CHMP4AQ9BY43 222 aa14□□□□□ -0.17
LDHA-211ENST00000494573 HMMRO75330 724 aa13.99□□□□□ -0.17
LDHA-211ENST00000494573 GCP02774 474 aa13.99□□□□□ -0.17
LDHA-211ENST00000494573 HOXB7P09629 217 aa13.99□□□□□ -0.17
LDHA-211ENST00000494573 MFAP1P55081 439 aaKnown RBP13.99□□□□□ -0.17
LDHA-211ENST00000494573 AMOTQ4VCS5 1084 aa13.99□□□□□ -0.17
LDHA-211ENST00000494573 PLEKHO1Q53GL0 409 aaPredicted RBP13.99□□□□□ -0.17
LDHA-211ENST00000494573 G2E3Q7L622 706 aa13.99□□□□□ -0.17
LDHA-211ENST00000494573 C19orf44Q9H6X5 657 aa13.99□□□□□ -0.17
LDHA-211ENST00000494573 RBM25P49756 843 aaKnown RBP13.98□□□□□ -0.17
LDHA-211ENST00000494573 AKAP4Q5JQC9 854 aa13.98□□□□□ -0.17
LDHA-211ENST00000494573 KRT28Q7Z3Y7 464 aa13.98□□□□□ -0.17
LDHA-211ENST00000494573 USHBP1Q8N6Y0 703 aa13.98□□□□□ -0.17
LDHA-211ENST00000494573 MEIS3Q99687 375 aa13.98□□□□□ -0.17
LDHA-211ENST00000494573 PLEKHG2Q9H7P9 1386 aa13.97□□□□□ -0.17
LDHA-211ENST00000494573 DEKP35659 375 aaKnown RBP13.97□□□□□ -0.17
LDHA-211ENST00000494573 FLIIQ13045 1269 aa13.97□□□□□ -0.17
LDHA-211ENST00000494573 NFKBIBQ15653 356 aa13.97□□□□□ -0.17
LDHA-211ENST00000494573 PKD1L3Q7Z443 1732 aa13.96□□□□□ -0.17
LDHA-211ENST00000494573 CDC45O75419 566 aa13.96□□□□□ -0.17
LDHA-211ENST00000494573 GNAI3P08754 354 aa13.96□□□□□ -0.17
LDHA-211ENST00000494573 PLEKHM2Q8IWE5 1019 aa13.96□□□□□ -0.17
LDHA-211ENST00000494573 AK9Q5TCS8 1911 aa13.96□□□□□ -0.18
LDHA-211ENST00000494573 PXDNQ92626 1479 aa13.95□□□□□ -0.18
LDHA-211ENST00000494573 GNAI2P04899 355 aa13.95□□□□□ -0.18
LDHA-211ENST00000494573 ZNF530Q6P9A1 599 aaPredicted RBP13.95□□□□□ -0.18
LDHA-211ENST00000494573 TBC1D2Q9BYX2 928 aa13.95□□□□□ -0.18
LDHA-211ENST00000494573 TTC22Q5TAA0 569 aa13.94□□□□□ -0.18
LDHA-211ENST00000494573 ANKRD24Q8TF21 1146 aa13.94□□□□□ -0.18
LDHA-211ENST00000494573 ZBTB7CA1YPR0 619 aa13.93□□□□□ -0.18
LDHA-211ENST00000494573 F6X3S4 739 aa13.93□□□□□ -0.18
LDHA-211ENST00000494573 EIF4A1P60842 406 aaKnown RBP13.93□□□□□ -0.18
LDHA-211ENST00000494573 FKBP5Q13451 457 aaPredicted RBP13.93□□□□□ -0.18
LDHA-211ENST00000494573 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
LDHA-211ENST00000494573 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
LDHA-211ENST00000494573 LRRC59Q96AG4 307 aaKnown RBP13.93□□□□□ -0.18
LDHA-211ENST00000494573 TMEM94Q12767 1356 aa13.93□□□□□ -0.18
LDHA-211ENST00000494573 PARP4Q9UKK3 1724 aaKnown RBP13.93□□□□□ -0.18
LDHA-211ENST00000494573 RNMTO43148 476 aaKnown RBP13.92□□□□□ -0.18
LDHA-211ENST00000494573 ATF3P18847 181 aa13.92□□□□□ -0.18
LDHA-211ENST00000494573 TEFQ10587 303 aa13.92□□□□□ -0.18
LDHA-211ENST00000494573 TBC1D9Q6ZT07 1266 aa13.92□□□□□ -0.18
LDHA-211ENST00000494573 SNX21Q969T3 373 aa13.92□□□□□ -0.18
LDHA-211ENST00000494573 DNAJC5Q9H3Z4 198 aa13.92□□□□□ -0.18
LDHA-211ENST00000494573 ANTXR1Q9H6X2 564 aa13.92□□□□□ -0.18
LDHA-211ENST00000494573 C5P01031 1676 aa13.91□□□□□ -0.18
LDHA-211ENST00000494573 TNS3Q68CZ2 1445 aa13.91□□□□□ -0.18
LDHA-211ENST00000494573 GSPT1P15170 499 aaKnown RBP13.91□□□□□ -0.18
LDHA-211ENST00000494573 ATP8B2P98198 1209 aa13.91□□□□□ -0.18
LDHA-211ENST00000494573 XPCQ01831 940 aaPredicted RBP13.91□□□□□ -0.18
LDHA-211ENST00000494573 C1orf141Q5JVX7 400 aa13.91□□□□□ -0.18
LDHA-211ENST00000494573 LGR6Q9HBX8 967 aa13.91□□□□□ -0.18
LDHA-211ENST00000494573 HSCBQ8IWL3 235 aa13.9□□□□□ -0.18
LDHA-211ENST00000494573 OSBPL3Q9H4L5 887 aa13.9□□□□□ -0.18
LDHA-211ENST00000494573 HEG1Q9ULI3 1381 aa13.9□□□□□ -0.18
LDHA-211ENST00000494573 ERBB3P21860 1342 aa13.9□□□□□ -0.19
LDHA-211ENST00000494573 LAMB4A4D0S4 1761 aa13.89□□□□□ -0.19
LDHA-211ENST00000494573 STRCQ7RTU9 1775 aa13.89□□□□□ -0.19
LDHA-211ENST00000494573 BTBD11A6QL63 1104 aa13.89□□□□□ -0.19
LDHA-211ENST00000494573 LMOD2Q6P5Q4 547 aa13.89□□□□□ -0.19
LDHA-211ENST00000494573 ABCA3Q99758 1704 aa13.89□□□□□ -0.19
LDHA-211ENST00000494573 NPHP3Q7Z494 1330 aa13.89□□□□□ -0.19
LDHA-211ENST00000494573 MRC1P22897 1456 aa13.88□□□□□ -0.19
LDHA-211ENST00000494573 CADPS2Q86UW7 1296 aa13.88□□□□□ -0.19
LDHA-211ENST00000494573 IBTKQ9P2D0 1353 aaPredicted RBP13.87□□□□□ -0.19
LDHA-211ENST00000494573 C16orf71Q8IYS4 520 aaPredicted RBP13.87□□□□□ -0.19
LDHA-211ENST00000494573 NECTIN2Q92692 538 aa13.87□□□□□ -0.19
LDHA-211ENST00000494573 AXIN2Q9Y2T1 843 aa13.87□□□□□ -0.19
LDHA-211ENST00000494573 SALL3Q9BXA9 1300 aa13.87□□□□□ -0.19
LDHA-211ENST00000494573 SMARCA5O60264 1052 aaPredicted RBP13.86□□□□□ -0.19
LDHA-211ENST00000494573 UBTFL1P0CB47 393 aaPredicted RBP13.86□□□□□ -0.19
LDHA-211ENST00000494573 CASC1Q6TDU7 716 aa13.86□□□□□ -0.19
LDHA-211ENST00000494573 MPRIPQ6WCQ1 1025 aa13.86□□□□□ -0.19
LDHA-211ENST00000494573 SRCIN1Q9C0H9 1055 aa13.86□□□□□ -0.19
LDHA-211ENST00000494573 USP44Q9H0E7 712 aa13.86□□□□□ -0.19
LDHA-211ENST00000494573 SLKQ9H2G2 1235 aaPredicted RBP13.86□□□□□ -0.19
LDHA-211ENST00000494573 PHAXQ9H814 394 aaKnown RBP13.86□□□□□ -0.19
LDHA-211ENST00000494573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.19
LDHA-211ENST00000494573 AOX1Q06278 1338 aa13.86□□□□□ -0.19
LDHA-211ENST00000494573 CPDO75976 1380 aa13.85□□□□□ -0.19
LDHA-211ENST00000494573 FRAT2O75474 233 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms