RNA–Protein interactions for RNA: ENST00000494559.5

PDZRN3-211, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-211ENST00000494559 EIF4A1P60842 406 aaKnown RBP19.39■□□□□ 0.69
PDZRN3-211ENST00000494559 NBR1Q14596 966 aa19.39■□□□□ 0.69
PDZRN3-211ENST00000494559 OVOS2A0A0G2JMS6 1433 aa19.39■□□□□ 0.69
PDZRN3-211ENST00000494559 COL18A1P39060 1754 aa19.39■□□□□ 0.69
PDZRN3-211ENST00000494559 SLC4A10Q6U841 1118 aa19.39■□□□□ 0.69
PDZRN3-211ENST00000494559 NECTIN2Q92692 538 aa19.39■□□□□ 0.69
PDZRN3-211ENST00000494559 DAXXQ9UER7 740 aaPredicted RBP19.39■□□□□ 0.69
PDZRN3-211ENST00000494559 ZC3H6P61129 1189 aaKnown RBP19.38■□□□□ 0.69
PDZRN3-211ENST00000494559 CRYBG1Q9Y4K1 1723 aa19.38■□□□□ 0.69
PDZRN3-211ENST00000494559 LMTK3Q96Q04 1460 aa19.38■□□□□ 0.69
PDZRN3-211ENST00000494559 NPHP3Q7Z494 1330 aa19.38■□□□□ 0.69
PDZRN3-211ENST00000494559 RNMTO43148 476 aaKnown RBP19.37■□□□□ 0.69
PDZRN3-211ENST00000494559 ADAMTS7Q9UKP4 1686 aa19.37■□□□□ 0.69
PDZRN3-211ENST00000494559 FKBP5Q13451 457 aaPredicted RBP19.37■□□□□ 0.69
PDZRN3-211ENST00000494559 MPRIPQ6WCQ1 1025 aa19.37■□□□□ 0.69
PDZRN3-211ENST00000494559 TNS3Q68CZ2 1445 aa19.36■□□□□ 0.69
PDZRN3-211ENST00000494559 HOXB7P09629 217 aa19.36■□□□□ 0.69
PDZRN3-211ENST00000494559 HDGFL1Q5TGJ6 251 aa19.36■□□□□ 0.69
PDZRN3-211ENST00000494559 TEFQ10587 303 aa19.36■□□□□ 0.69
PDZRN3-211ENST00000494559 PXDNLA1KZ92 1463 aa19.35■□□□□ 0.69
PDZRN3-211ENST00000494559 SIPA1L3O60292 1781 aaPredicted RBP19.35■□□□□ 0.69
PDZRN3-211ENST00000494559 STRCQ7RTU9 1775 aa19.35■□□□□ 0.69
PDZRN3-211ENST00000494559 KCNQ3O43525 872 aa19.35■□□□□ 0.69
PDZRN3-211ENST00000494559 C1orf141Q5JVX7 400 aa19.35■□□□□ 0.69
PDZRN3-211ENST00000494559 BTBD11A6QL63 1104 aa19.34■□□□□ 0.69
PDZRN3-211ENST00000494559 MFAP1P55081 439 aaKnown RBP19.34■□□□□ 0.69
PDZRN3-211ENST00000494559 PLEKHM2Q8IWE5 1019 aa19.33■□□□□ 0.69
PDZRN3-211ENST00000494559 C22orf23Q9BZE7 217 aa19.33■□□□□ 0.69
PDZRN3-211ENST00000494559 ABCC6O95255 1503 aa19.33■□□□□ 0.68
PDZRN3-211ENST00000494559 SPATA31A3Q5VYP0 1347 aa19.32■□□□□ 0.68
PDZRN3-211ENST00000494559 GNAI2P04899 355 aa19.32■□□□□ 0.68
PDZRN3-211ENST00000494559 PHAXQ9H814 394 aaKnown RBP19.32■□□□□ 0.68
PDZRN3-211ENST00000494559 HMMRO75330 724 aa19.31■□□□□ 0.68
PDZRN3-211ENST00000494559 GNAI3P08754 354 aa19.31■□□□□ 0.68
PDZRN3-211ENST00000494559 BECN1Q14457 450 aa19.31■□□□□ 0.68
PDZRN3-211ENST00000494559 CHMP4AQ9BY43 222 aa19.31■□□□□ 0.68
PDZRN3-211ENST00000494559 HEG1Q9ULI3 1381 aa19.3■□□□□ 0.68
PDZRN3-211ENST00000494559 EIF2S2P20042 333 aaKnown RBP19.3■□□□□ 0.68
PDZRN3-211ENST00000494559 CABLES1Q8TDN4 633 aa19.3■□□□□ 0.68
PDZRN3-211ENST00000494559 C16orf71Q8IYS4 520 aaPredicted RBP19.29■□□□□ 0.68
PDZRN3-211ENST00000494559 KDM4FA0A1W2PPD8 638 aa19.29■□□□□ 0.68
PDZRN3-211ENST00000494559 GSPT1P15170 499 aaKnown RBP19.29■□□□□ 0.68
PDZRN3-211ENST00000494559 CHPF2Q9P2E5 772 aa19.29■□□□□ 0.68
PDZRN3-211ENST00000494559 SCN11AQ9UI33 1791 aa19.28■□□□□ 0.68
PDZRN3-211ENST00000494559 BRINP3Q76B58 766 aa19.28■□□□□ 0.68
PDZRN3-211ENST00000494559 NLRP2Q9NX02 1062 aa19.28■□□□□ 0.68
PDZRN3-211ENST00000494559 USP44Q9H0E7 712 aa19.28■□□□□ 0.68
PDZRN3-211ENST00000494559 CPDO75976 1380 aa19.28■□□□□ 0.68
PDZRN3-211ENST00000494559 MEGF6O75095 1541 aa19.27■□□□□ 0.68
PDZRN3-211ENST00000494559 TBC1D9Q6ZT07 1266 aa19.27■□□□□ 0.68
PDZRN3-211ENST00000494559 RAPGEF4Q8WZA2 1011 aa19.27■□□□□ 0.68
PDZRN3-211ENST00000494559 PLEKHG2Q9H7P9 1386 aa19.26■□□□□ 0.67
PDZRN3-211ENST00000494559 SMARCA5O60264 1052 aaPredicted RBP19.26■□□□□ 0.67
PDZRN3-211ENST00000494559 RBM25P49756 843 aaKnown RBP19.26■□□□□ 0.67
PDZRN3-211ENST00000494559 TTC22Q5TAA0 569 aa19.26■□□□□ 0.67
PDZRN3-211ENST00000494559 OTUD7AQ8TE49 926 aaPredicted RBP19.26■□□□□ 0.67
PDZRN3-211ENST00000494559 GIGYF1O75420 1035 aaPredicted RBP19.26■□□□□ 0.67
PDZRN3-211ENST00000494559 ATP8B2P98198 1209 aa19.26■□□□□ 0.67
PDZRN3-211ENST00000494559 TBC1D2Q9BYX2 928 aa19.26■□□□□ 0.67
PDZRN3-211ENST00000494559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.26■□□□□ 0.67
PDZRN3-211ENST00000494559 USP35Q9P2H5 1018 aa19.26■□□□□ 0.67
PDZRN3-211ENST00000494559 CHRNA2Q15822 529 aa19.25■□□□□ 0.67
PDZRN3-211ENST00000494559 KDM6AO15550 1401 aaPredicted RBP19.25■□□□□ 0.67
PDZRN3-211ENST00000494559 TATP17735 454 aaPredicted RBP19.24■□□□□ 0.67
PDZRN3-211ENST00000494559 RTL5Q5HYW3 569 aaPredicted RBP19.24■□□□□ 0.67
PDZRN3-211ENST00000494559 PNMA6EA0A0J9YXQ4 647 aa19.24■□□□□ 0.67
PDZRN3-211ENST00000494559 LRRFIP2Q9Y608 721 aaKnown RBP19.24■□□□□ 0.67
PDZRN3-211ENST00000494559 PKD1L3Q7Z443 1732 aa19.23■□□□□ 0.67
PDZRN3-211ENST00000494559 APBB1O00213 710 aa19.23■□□□□ 0.67
PDZRN3-211ENST00000494559 CDC45O75419 566 aa19.23■□□□□ 0.67
PDZRN3-211ENST00000494559 PHKG2P15735 406 aa19.23■□□□□ 0.67
PDZRN3-211ENST00000494559 SRCIN1Q9C0H9 1055 aa19.23■□□□□ 0.67
PDZRN3-211ENST00000494559 DBF4Q9UBU7 674 aaPredicted RBP19.23■□□□□ 0.67
PDZRN3-211ENST00000494559 DNAAF4Q8WXU2 420 aa19.23■□□□□ 0.67
PDZRN3-211ENST00000494559 SPG7Q9UQ90 795 aa19.23■□□□□ 0.67
PDZRN3-211ENST00000494559 ADCY9O60503 1353 aa19.22■□□□□ 0.67
PDZRN3-211ENST00000494559 PI4KAP2A4QPH2 592 aa19.22■□□□□ 0.67
PDZRN3-211ENST00000494559 ANXA1P04083 346 aa19.22■□□□□ 0.67
PDZRN3-211ENST00000494559 CSB-PGBD3P0DP91 1061 aa19.22■□□□□ 0.67
PDZRN3-211ENST00000494559 BEND3Q5T5X7 828 aa19.22■□□□□ 0.67
PDZRN3-211ENST00000494559 PI4KAP1Q8N8J0 262 aa19.22■□□□□ 0.67
PDZRN3-211ENST00000494559 ZNF335Q9H4Z2 1342 aaPredicted RBP19.22■□□□□ 0.67
PDZRN3-211ENST00000494559 UBTFL1P0CB47 393 aaPredicted RBP19.21■□□□□ 0.67
PDZRN3-211ENST00000494559 SOS2Q07890 1332 aaPredicted RBP19.21■□□□□ 0.67
PDZRN3-211ENST00000494559 NFKBIBQ15653 356 aa19.21■□□□□ 0.67
PDZRN3-211ENST00000494559 OSBPL3Q9H4L5 887 aa19.21■□□□□ 0.67
PDZRN3-211ENST00000494559 SLC52A2Q9HAB3 445 aa19.21■□□□□ 0.67
PDZRN3-211ENST00000494559 EXOC6BQ9Y2D4 811 aa19.21■□□□□ 0.67
PDZRN3-211ENST00000494559 PRAMEF22A3QJZ6 481 aa19.2■□□□□ 0.66
PDZRN3-211ENST00000494559 IFNL2Q8IZJ0 200 aa19.2■□□□□ 0.66
PDZRN3-211ENST00000494559 SLAIN2Q9P270 581 aa19.2■□□□□ 0.66
PDZRN3-211ENST00000494559 IBTKQ9P2D0 1353 aaPredicted RBP19.2■□□□□ 0.66
PDZRN3-211ENST00000494559 MRC1P22897 1456 aa19.19■□□□□ 0.66
PDZRN3-211ENST00000494559 PROSER3Q2NL68 480 aa19.19■□□□□ 0.66
PDZRN3-211ENST00000494559 SSH3Q8TE77 659 aa19.19■□□□□ 0.66
PDZRN3-211ENST00000494559 BCL11AQ9H165 835 aa19.19■□□□□ 0.66
PDZRN3-211ENST00000494559 ANTXR1Q9H6X2 564 aa19.19■□□□□ 0.66
PDZRN3-211ENST00000494559 SALL3Q9BXA9 1300 aa19.19■□□□□ 0.66
PDZRN3-211ENST00000494559 ZNF790Q6PG37 636 aa19.18■□□□□ 0.66
PDZRN3-211ENST00000494559 C5P01031 1676 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms