RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 SLC15A2Q16348 729 aa31.15■■■□□ 2.58
CLIC3-203ENST00000494426 ZNF827Q17R98 1081 aa31.14■■■□□ 2.58
CLIC3-203ENST00000494426 STK32BQ9NY57 414 aa31.14■■■□□ 2.58
CLIC3-203ENST00000494426 DLG5Q8TDM6 1919 aa31.14■■■□□ 2.57
CLIC3-203ENST00000494426 AKT1S1Q96B36 256 aa31.13■■■□□ 2.57
CLIC3-203ENST00000494426 PNNQ9H307 717 aaKnown RBP31.13■■■□□ 2.57
CLIC3-203ENST00000494426 C5P01031 1676 aa31.13■■■□□ 2.57
CLIC3-203ENST00000494426 LOC102724428A0A0B4J2F2 783 aa31.12■■■□□ 2.57
CLIC3-203ENST00000494426 SIK1P57059 783 aa31.12■■■□□ 2.57
CLIC3-203ENST00000494426 SIPA1L3O60292 1781 aaPredicted RBP31.11■■■□□ 2.57
CLIC3-203ENST00000494426 CEMIPQ8WUJ3 1361 aa31.11■■■□□ 2.57
CLIC3-203ENST00000494426 ADAMTS8Q9UP79 889 aa31.11■■■□□ 2.57
CLIC3-203ENST00000494426 WDR43Q15061 677 aaKnown RBP eCLIP31.1■■■□□ 2.57
CLIC3-203ENST00000494426 SLC4A9Q96Q91 983 aa31.1■■■□□ 2.57
CLIC3-203ENST00000494426 NEFMP07197 916 aa31.09■■■□□ 2.57
CLIC3-203ENST00000494426 PDGFDQ9GZP0 370 aaPredicted RBP31.08■■■□□ 2.57
CLIC3-203ENST00000494426 ZNF831Q5JPB2 1677 aa31.08■■■□□ 2.57
CLIC3-203ENST00000494426 TUBGCP6Q96RT7 1819 aa31.08■■■□□ 2.57
CLIC3-203ENST00000494426 CASZ1Q86V15 1759 aa31.07■■■□□ 2.56
CLIC3-203ENST00000494426 ITPK1Q13572 414 aa31.07■■■□□ 2.56
CLIC3-203ENST00000494426 NFE2L2Q16236 605 aa31.07■■■□□ 2.56
CLIC3-203ENST00000494426 MAPK8IP3Q9UPT6 1336 aa31.06■■■□□ 2.56
CLIC3-203ENST00000494426 HTATSF1O43719 755 aaKnown RBP31.06■■■□□ 2.56
CLIC3-203ENST00000494426 DCTN1Q14203 1278 aa31.06■■■□□ 2.56
CLIC3-203ENST00000494426 MCM10Q7L590 875 aa31.06■■■□□ 2.56
CLIC3-203ENST00000494426 QSER1Q2KHR3 1735 aa31.05■■■□□ 2.56
CLIC3-203ENST00000494426 ATP6V1AP38606 617 aa31.05■■■□□ 2.56
CLIC3-203ENST00000494426 SLC39A6Q13433 755 aa31.05■■■□□ 2.56
CLIC3-203ENST00000494426 CCDC146Q8IYE0 955 aa31.05■■■□□ 2.56
CLIC3-203ENST00000494426 RBM42Q9BTD8 480 aaKnown RBP31.05■■■□□ 2.56
CLIC3-203ENST00000494426 C4BP0C0L5 1744 aa31.04■■■□□ 2.56
CLIC3-203ENST00000494426 TEFQ10587 303 aa31.04■■■□□ 2.56
CLIC3-203ENST00000494426 RTF1Q92541 710 aaKnown RBP31.04■■■□□ 2.56
CLIC3-203ENST00000494426 LINC00116Q8NCU8 138 aa31.03■■■□□ 2.56
CLIC3-203ENST00000494426 PTCD1O75127 700 aaKnown RBP31.02■■■□□ 2.56
CLIC3-203ENST00000494426 RUNDC1Q96C34 613 aa31.01■■■□□ 2.55
CLIC3-203ENST00000494426 UBR2Q8IWV8 1755 aa31■■■□□ 2.55
CLIC3-203ENST00000494426 KCPQ6ZWJ8 1503 aa31■■■□□ 2.55
CLIC3-203ENST00000494426 COL5A3P25940 1745 aaPredicted RBP30.99■■■□□ 2.55
CLIC3-203ENST00000494426 TJP1Q07157 1748 aa30.99■■■□□ 2.55
CLIC3-203ENST00000494426 TMPOP42166 694 aaKnown RBP30.99■■■□□ 2.55
CLIC3-203ENST00000494426 TFCP2L1Q9NZI6 479 aa30.99■■■□□ 2.55
CLIC3-203ENST00000494426 PNPLA7Q6ZV29 1317 aa30.98■■■□□ 2.55
CLIC3-203ENST00000494426 HMGB2P26583 209 aaKnown RBP30.98■■■□□ 2.55
CLIC3-203ENST00000494426 MRS2Q9HD23 443 aa30.98■■■□□ 2.55
CLIC3-203ENST00000494426 CICQ96RK0 1608 aaPredicted RBP30.98■■■□□ 2.55
CLIC3-203ENST00000494426 PNISRQ8TF01 805 aaKnown RBP30.97■■■□□ 2.55
CLIC3-203ENST00000494426 RIPK4P57078 832 aa30.96■■■□□ 2.55
CLIC3-203ENST00000494426 UBR3Q6ZT12 1888 aa30.95■■■□□ 2.55
CLIC3-203ENST00000494426 ZNF790Q6PG37 636 aa30.95■■■□□ 2.55
CLIC3-203ENST00000494426 AMIGO3Q86WK7 504 aa30.95■■■□□ 2.55
CLIC3-203ENST00000494426 LRP5O75197 1615 aa30.95■■■□□ 2.54
CLIC3-203ENST00000494426 BTBD11A6QL63 1104 aa30.94■■■□□ 2.54
CLIC3-203ENST00000494426 KCNQ3O43525 872 aa30.94■■■□□ 2.54
CLIC3-203ENST00000494426 THUMPD2Q9BTF0 503 aaKnown RBP30.94■■■□□ 2.54
CLIC3-203ENST00000494426 RRP7AQ9Y3A4 280 aaKnown RBP30.94■■■□□ 2.54
CLIC3-203ENST00000494426 COL23A1Q86Y22 540 aaPredicted RBP30.92■■■□□ 2.54
CLIC3-203ENST00000494426 AK7Q96M32 723 aa30.92■■■□□ 2.54
CLIC3-203ENST00000494426 MYH14Q7Z406 1995 aaKnown RBP30.92■■■□□ 2.54
CLIC3-203ENST00000494426 ZBTB7AO95365 584 aa30.91■■■□□ 2.54
CLIC3-203ENST00000494426 SMIM5Q71RC9 77 aa30.91■■■□□ 2.54
CLIC3-203ENST00000494426 DNAJC10Q8IXB1 793 aa30.91■■■□□ 2.54
CLIC3-203ENST00000494426 TTC5Q8N0Z6 440 aa30.91■■■□□ 2.54
CLIC3-203ENST00000494426 TAF7Q15545 349 aaPredicted RBP30.9■■■□□ 2.54
CLIC3-203ENST00000494426 NEUROD2Q15784 382 aa30.9■■■□□ 2.54
CLIC3-203ENST00000494426 ZNF496Q96IT1 587 aaPredicted RBP30.9■■■□□ 2.54
CLIC3-203ENST00000494426 RC3H1Q5TC82 1133 aaKnown RBP30.89■■■□□ 2.54
CLIC3-203ENST00000494426 VSIG10Q8N0Z9 540 aa30.89■■■□□ 2.54
CLIC3-203ENST00000494426 TRIM35Q9UPQ4 493 aa30.88■■■□□ 2.53
CLIC3-203ENST00000494426 CNTNAP4Q9C0A0 1308 aa30.88■■■□□ 2.53
CLIC3-203ENST00000494426 GNPATO15228 680 aa30.87■■■□□ 2.53
CLIC3-203ENST00000494426 SPON1Q9HCB6 807 aa30.87■■■□□ 2.53
CLIC3-203ENST00000494426 MIS18AQ9NYP9 233 aa30.87■■■□□ 2.53
CLIC3-203ENST00000494426 APAF1O14727 1248 aa30.86■■■□□ 2.53
CLIC3-203ENST00000494426 ATF5Q9Y2D1 282 aaPredicted RBP30.86■■■□□ 2.53
CLIC3-203ENST00000494426 HEG1Q9ULI3 1381 aa30.86■■■□□ 2.53
CLIC3-203ENST00000494426 KDM3BQ7LBC6 1761 aa30.85■■■□□ 2.53
CLIC3-203ENST00000494426 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.85■■■□□ 2.53
CLIC3-203ENST00000494426 CRKLP46109 303 aaKnown RBP30.85■■■□□ 2.53
CLIC3-203ENST00000494426 MTFR1LQ9H019 292 aa30.85■■■□□ 2.53
CLIC3-203ENST00000494426 PHF14O94880 888 aa30.84■■■□□ 2.53
CLIC3-203ENST00000494426 CYP19A1P11511 503 aaPredicted RBP30.84■■■□□ 2.53
CLIC3-203ENST00000494426 LMOD3Q0VAK6 560 aa30.84■■■□□ 2.53
CLIC3-203ENST00000494426 INTS5Q6P9B9 1019 aaKnown RBP30.84■■■□□ 2.53
CLIC3-203ENST00000494426 FLAD1Q8NFF5 587 aa30.84■■■□□ 2.53
CLIC3-203ENST00000494426 SLC16A10Q8TF71 515 aa30.84■■■□□ 2.53
CLIC3-203ENST00000494426 FMNL2Q96PY5 1086 aa30.84■■■□□ 2.53
CLIC3-203ENST00000494426 SSFA2P28290 1259 aa30.83■■■□□ 2.53
CLIC3-203ENST00000494426 COL24A1Q17RW2 1714 aa30.83■■■□□ 2.53
CLIC3-203ENST00000494426 PTGER2P43116 358 aa30.82■■■□□ 2.52
CLIC3-203ENST00000494426 SRCAPQ6ZRS2 3230 aa30.82■■■□□ 2.52
CLIC3-203ENST00000494426 MSH5O43196 834 aa30.81■■■□□ 2.52
CLIC3-203ENST00000494426 RPS6KA4O75676 772 aa30.81■■■□□ 2.52
CLIC3-203ENST00000494426 SGIP1Q9BQI5 828 aa30.81■■■□□ 2.52
CLIC3-203ENST00000494426 RTCBQ9Y3I0 505 aaKnown RBP30.8■■■□□ 2.52
CLIC3-203ENST00000494426 CCDC87Q9NVE4 849 aa30.78■■■□□ 2.52
CLIC3-203ENST00000494426 PRAMEF22A3QJZ6 481 aa30.77■■■□□ 2.52
CLIC3-203ENST00000494426 TRAPPC3LQ5T215 181 aa30.76■■■□□ 2.51
CLIC3-203ENST00000494426 TEX13AQ9BXU3 409 aaPredicted RBP30.76■■■□□ 2.51
CLIC3-203ENST00000494426 ARHGEF1Q92888 912 aaKnown RBP30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms