RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 SYT17Q9BSW7 474 aa9.69□□□□□ -0.86
RBM39-239ENST00000494274 PLEKHG2Q9H7P9 1386 aa9.69□□□□□ -0.86
RBM39-239ENST00000494274 PRKAR2BP31323 418 aa9.68□□□□□ -0.86
RBM39-239ENST00000494274 SLC39A6Q13433 755 aa9.68□□□□□ -0.86
RBM39-239ENST00000494274 PHACTR3Q96KR7 559 aa9.68□□□□□ -0.86
RBM39-239ENST00000494274 SLC4A9Q96Q91 983 aa9.68□□□□□ -0.86
RBM39-239ENST00000494274 SLC52A2Q9HAB3 445 aa9.68□□□□□ -0.86
RBM39-239ENST00000494274 MAP2P11137 1827 aaKnown RBP9.68□□□□□ -0.86
RBM39-239ENST00000494274 KAT6BQ8WYB5 2073 aa9.67□□□□□ -0.86
RBM39-239ENST00000494274 GNAT3A8MTJ3 354 aa9.67□□□□□ -0.86
RBM39-239ENST00000494274 AMIGO3Q86WK7 504 aa9.67□□□□□ -0.86
RBM39-239ENST00000494274 GAS2L2Q8NHY3 880 aa9.67□□□□□ -0.86
RBM39-239ENST00000494274 RTCBQ9Y3I0 505 aaKnown RBP9.67□□□□□ -0.86
RBM39-239ENST00000494274 KDM6AO15550 1401 aaPredicted RBP9.66□□□□□ -0.86
RBM39-239ENST00000494274 BTAF1O14981 1849 aa9.66□□□□□ -0.86
RBM39-239ENST00000494274 FCHSD2O94868 740 aa9.66□□□□□ -0.86
RBM39-239ENST00000494274 SSFA2P28290 1259 aa9.66□□□□□ -0.86
RBM39-239ENST00000494274 TEFQ10587 303 aa9.66□□□□□ -0.86
RBM39-239ENST00000494274 TRAPPC3LQ5T215 181 aa9.66□□□□□ -0.86
RBM39-239ENST00000494274 IL17REQ8NFR9 667 aa9.66□□□□□ -0.86
RBM39-239ENST00000494274 LRP5O75197 1615 aa9.65□□□□□ -0.86
RBM39-239ENST00000494274 ZEB1P37275 1124 aaPredicted RBP9.65□□□□□ -0.86
RBM39-239ENST00000494274 PELP1Q8IZL8 1130 aaKnown RBP9.65□□□□□ -0.86
RBM39-239ENST00000494274 RSPH6AQ9H0K4 717 aa9.65□□□□□ -0.86
RBM39-239ENST00000494274 DOT1LQ8TEK3 1739 aa9.65□□□□□ -0.87
RBM39-239ENST00000494274 ANKRD26Q9UPS8 1709 aa9.65□□□□□ -0.87
RBM39-239ENST00000494274 RPS6KA4O75676 772 aa9.64□□□□□ -0.87
RBM39-239ENST00000494274 NEFMP07197 916 aa9.64□□□□□ -0.87
RBM39-239ENST00000494274 RFC4P35249 363 aa9.64□□□□□ -0.87
RBM39-239ENST00000494274 RALBP1Q15311 655 aa9.64□□□□□ -0.87
RBM39-239ENST00000494274 RC3H1Q5TC82 1133 aaKnown RBP9.64□□□□□ -0.87
RBM39-239ENST00000494274 DNAJC10Q8IXB1 793 aa9.64□□□□□ -0.87
RBM39-239ENST00000494274 TTC5Q8N0Z6 440 aa9.64□□□□□ -0.87
RBM39-239ENST00000494274 RTF1Q92541 710 aaKnown RBP9.64□□□□□ -0.87
RBM39-239ENST00000494274 ARHGEF1Q92888 912 aaKnown RBP9.64□□□□□ -0.87
RBM39-239ENST00000494274 RGPD3A6NKT7 1758 aaPredicted RBP9.64□□□□□ -0.87
RBM39-239ENST00000494274 RGPD4Q7Z3J3 1758 aa9.64□□□□□ -0.87
RBM39-239ENST00000494274 SHANK3Q9BYB0 1731 aa9.63□□□□□ -0.87
RBM39-239ENST00000494274 CRKLP46109 303 aaKnown RBP9.63□□□□□ -0.87
RBM39-239ENST00000494274 GPR162Q16538 588 aa9.63□□□□□ -0.87
RBM39-239ENST00000494274 MCM10Q7L590 875 aa9.63□□□□□ -0.87
RBM39-239ENST00000494274 MAP3K5Q99683 1374 aa9.63□□□□□ -0.87
RBM39-239ENST00000494274 COL3A1P02461 1466 aaPredicted RBP9.62□□□□□ -0.87
RBM39-239ENST00000494274 DCTN1Q14203 1278 aa9.62□□□□□ -0.87
RBM39-239ENST00000494274 NLGN2Q8NFZ4 835 aa9.62□□□□□ -0.87
RBM39-239ENST00000494274 PKD1L3Q7Z443 1732 aa9.62□□□□□ -0.87
RBM39-239ENST00000494274 CNTNAP4Q9C0A0 1308 aa9.61□□□□□ -0.87
RBM39-239ENST00000494274 PAPPAQ13219 1627 aa9.61□□□□□ -0.87
RBM39-239ENST00000494274 BTBD11A6QL63 1104 aa9.61□□□□□ -0.87
RBM39-239ENST00000494274 YY1P25490 414 aa9.61□□□□□ -0.87
RBM39-239ENST00000494274 CANXP27824 592 aaKnown RBP9.61□□□□□ -0.87
RBM39-239ENST00000494274 INTS5Q6P9B9 1019 aaKnown RBP9.61□□□□□ -0.87
RBM39-239ENST00000494274 ZNF790Q6PG37 636 aa9.61□□□□□ -0.87
RBM39-239ENST00000494274 NLGN1Q8N2Q7 840 aa9.61□□□□□ -0.87
RBM39-239ENST00000494274 ZNF496Q96IT1 587 aaPredicted RBP9.61□□□□□ -0.87
RBM39-239ENST00000494274 CCDC87Q9NVE4 849 aa9.61□□□□□ -0.87
RBM39-239ENST00000494274 KCNQ3O43525 872 aa9.6□□□□□ -0.87
RBM39-239ENST00000494274 MMP10P09238 476 aa9.6□□□□□ -0.87
RBM39-239ENST00000494274 CYP19A1P11511 503 aaPredicted RBP9.6□□□□□ -0.87
RBM39-239ENST00000494274 ADRA2BP18089 450 aa9.6□□□□□ -0.87
RBM39-239ENST00000494274 PNNQ9H307 717 aaKnown RBP9.6□□□□□ -0.87
RBM39-239ENST00000494274 SRP68Q9UHB9 627 aaKnown RBP9.6□□□□□ -0.87
RBM39-239ENST00000494274 WWC3Q9ULE0 1092 aa9.6□□□□□ -0.87
RBM39-239ENST00000494274 TOGARAM1Q9Y4F4 1720 aa9.59□□□□□ -0.87
RBM39-239ENST00000494274 ZPR1O75312 459 aa9.59□□□□□ -0.87
RBM39-239ENST00000494274 STARD3NLO95772 234 aa9.59□□□□□ -0.87
RBM39-239ENST00000494274 GYS1P13807 737 aa9.59□□□□□ -0.87
RBM39-239ENST00000494274 VSIG10Q8N0Z9 540 aa9.59□□□□□ -0.87
RBM39-239ENST00000494274 MIS18AQ9NYP9 233 aa9.59□□□□□ -0.87
RBM39-239ENST00000494274 ZBTB1Q9Y2K1 713 aa9.59□□□□□ -0.87
RBM39-239ENST00000494274 ZNF330Q9Y3S2 320 aaPredicted RBP9.59□□□□□ -0.87
RBM39-239ENST00000494274 CD2APQ9Y5K6 639 aa9.59□□□□□ -0.87
RBM39-239ENST00000494274 CASZ1Q86V15 1759 aa9.59□□□□□ -0.87
RBM39-239ENST00000494274 MAPK8IP3Q9UPT6 1336 aa9.58□□□□□ -0.88
RBM39-239ENST00000494274 HTATSF1O43719 755 aaKnown RBP9.58□□□□□ -0.88
RBM39-239ENST00000494274 TAF7Q15545 349 aaPredicted RBP9.58□□□□□ -0.88
RBM39-239ENST00000494274 NPM2Q86SE8 214 aaKnown RBP9.58□□□□□ -0.88
RBM39-239ENST00000494274 FMNL2Q96PY5 1086 aa9.58□□□□□ -0.88
RBM39-239ENST00000494274 PLEKHF1Q96S99 279 aa9.58□□□□□ -0.88
RBM39-239ENST00000494274 TEX13AQ9BXU3 409 aaPredicted RBP9.58□□□□□ -0.88
RBM39-239ENST00000494274 PARP3Q9Y6F1 533 aa9.58□□□□□ -0.88
RBM39-239ENST00000494274 MYBBP1AQ9BQG0 1328 aaKnown RBP9.57□□□□□ -0.88
RBM39-239ENST00000494274 FKBP8Q14318 412 aa9.57□□□□□ -0.88
RBM39-239ENST00000494274 NFE2L2Q16236 605 aa9.57□□□□□ -0.88
RBM39-239ENST00000494274 USPL1Q5W0Q7 1092 aa9.57□□□□□ -0.88
RBM39-239ENST00000494274 THUMPD2Q9BTF0 503 aaKnown RBP9.57□□□□□ -0.88
RBM39-239ENST00000494274 USP16Q9Y5T5 823 aa9.57□□□□□ -0.88
RBM39-239ENST00000494274 LY75O60449 1722 aa9.56□□□□□ -0.88
RBM39-239ENST00000494274 CEMIPQ8WUJ3 1361 aa9.56□□□□□ -0.88
RBM39-239ENST00000494274 A1BGP04217 495 aa9.56□□□□□ -0.88
RBM39-239ENST00000494274 RIPK4P57078 832 aa9.56□□□□□ -0.88
RBM39-239ENST00000494274 WDR43Q15061 677 aaKnown RBP eCLIP9.56□□□□□ -0.883e-7■■□□□ 11.8
RBM39-239ENST00000494274 NEUROD2Q15784 382 aa9.56□□□□□ -0.88
RBM39-239ENST00000494274 CCDC146Q8IYE0 955 aa9.56□□□□□ -0.88
RBM39-239ENST00000494274 PRKRIP1Q9H875 184 aaPredicted RBP9.56□□□□□ -0.88
RBM39-239ENST00000494274 C4BP0C0L5 1744 aa9.56□□□□□ -0.88
RBM39-239ENST00000494274 USP42Q9H9J4 1324 aaKnown RBP9.56□□□□□ -0.88
RBM39-239ENST00000494274 HEG1Q9ULI3 1381 aa9.55□□□□□ -0.88
RBM39-239ENST00000494274 A0A0G2JLW4 131 aa9.55□□□□□ -0.88
RBM39-239ENST00000494274 PRAMEF22A3QJZ6 481 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms