RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 LTV1Q96GA3 475 aaPredicted RBP11.9□□□□□ -0.51
NPHP3-209ENST00000493732 GBP4Q96PP9 640 aa11.9□□□□□ -0.51
NPHP3-209ENST00000493732 LTN1O94822 1766 aa11.89□□□□□ -0.51
NPHP3-209ENST00000493732 NPHP4O75161 1426 aaPredicted RBP11.89□□□□□ -0.51
NPHP3-209ENST00000493732 NCAPD2Q15021 1401 aa11.89□□□□□ -0.51
NPHP3-209ENST00000493732 FAM208AQ9UK61 1670 aaKnown RBP11.89□□□□□ -0.51
NPHP3-209ENST00000493732 DDIT3P35638 169 aa11.89□□□□□ -0.51
NPHP3-209ENST00000493732 AKAP4Q5JQC9 854 aa11.89□□□□□ -0.51
NPHP3-209ENST00000493732 KIF2CQ99661 725 aa11.89□□□□□ -0.51
NPHP3-209ENST00000493732 HDAC5Q9UQL6 1122 aa11.89□□□□□ -0.51
NPHP3-209ENST00000493732 OVOS2A0A0G2JMS6 1433 aa11.89□□□□□ -0.51
NPHP3-209ENST00000493732 N4BP2Q86UW6 1770 aaPredicted RBP11.88□□□□□ -0.51
NPHP3-209ENST00000493732 F6X3S4 739 aa11.88□□□□□ -0.51
NPHP3-209ENST00000493732 HDGFL1Q5TGJ6 251 aa11.88□□□□□ -0.51
NPHP3-209ENST00000493732 LRRCC1Q9C099 1032 aa11.88□□□□□ -0.51
NPHP3-209ENST00000493732 SDSP20132 328 aa11.88□□□□□ -0.51
NPHP3-209ENST00000493732 USP26Q9BXU7 913 aa11.88□□□□□ -0.51
NPHP3-209ENST00000493732 ADAMTSL3P82987 1691 aa11.87□□□□□ -0.51
NPHP3-209ENST00000493732 ERC2O15083 957 aa11.87□□□□□ -0.51
NPHP3-209ENST00000493732 UBTFL1P0CB47 393 aaPredicted RBP11.87□□□□□ -0.51
NPHP3-209ENST00000493732 PDE1AP54750 535 aa11.87□□□□□ -0.51
NPHP3-209ENST00000493732 SKOR2Q2VWA4 1001 aaPredicted RBP11.87□□□□□ -0.51
NPHP3-209ENST00000493732 SPRYD3Q8NCJ5 442 aa11.87□□□□□ -0.51
NPHP3-209ENST00000493732 ISY1Q9ULR0 285 aaKnown RBP11.87□□□□□ -0.51
NPHP3-209ENST00000493732 AOX1Q06278 1338 aa11.87□□□□□ -0.51
NPHP3-209ENST00000493732 MED1Q15648 1581 aaPredicted RBP11.87□□□□□ -0.51
NPHP3-209ENST00000493732 EPB41L2O43491 1005 aaKnown RBP11.86□□□□□ -0.51
NPHP3-209ENST00000493732 ST18O60284 1047 aa11.86□□□□□ -0.51
NPHP3-209ENST00000493732 RAB11FIP3O75154 756 aa11.86□□□□□ -0.51
NPHP3-209ENST00000493732 TEFQ10587 303 aa11.86□□□□□ -0.51
NPHP3-209ENST00000493732 C16orf71Q8IYS4 520 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-209ENST00000493732 SLIT3O75094 1523 aa11.86□□□□□ -0.51
NPHP3-209ENST00000493732 EIF4A1P60842 406 aaKnown RBP11.86□□□□□ -0.51
NPHP3-209ENST00000493732 C1orf141Q5JVX7 400 aa11.86□□□□□ -0.51
NPHP3-209ENST00000493732 NBPF6Q5VWK0 638 aa11.86□□□□□ -0.51
NPHP3-209ENST00000493732 NBPF4Q96M43 638 aa11.86□□□□□ -0.51
NPHP3-209ENST00000493732 IBTKQ9P2D0 1353 aaPredicted RBP11.85□□□□□ -0.51
NPHP3-209ENST00000493732 LMTK3Q96Q04 1460 aa11.85□□□□□ -0.51
NPHP3-209ENST00000493732 GCP02774 474 aa11.85□□□□□ -0.51
NPHP3-209ENST00000493732 RAB3GAP1Q15042 981 aa11.85□□□□□ -0.51
NPHP3-209ENST00000493732 HSP90AB4PQ58FF6 505 aa11.85□□□□□ -0.51
NPHP3-209ENST00000493732 ARHGEF25Q86VW2 580 aa11.85□□□□□ -0.51
NPHP3-209ENST00000493732 STAP2Q9UGK3 403 aa11.85□□□□□ -0.51
NPHP3-209ENST00000493732 LMO7Q8WWI1 1683 aa11.84□□□□□ -0.51
NPHP3-209ENST00000493732 GOLGA6L22H0YM25 854 aa11.84□□□□□ -0.51
NPHP3-209ENST00000493732 SMARCA5O60264 1052 aaPredicted RBP11.84□□□□□ -0.51
NPHP3-209ENST00000493732 MCCP23508 829 aa11.84□□□□□ -0.51
NPHP3-209ENST00000493732 ZNF530Q6P9A1 599 aaPredicted RBP11.84□□□□□ -0.51
NPHP3-209ENST00000493732 CWC22Q9HCG8 908 aaKnown RBP11.84□□□□□ -0.51
NPHP3-209ENST00000493732 MST1RQ04912 1400 aa11.84□□□□□ -0.51
NPHP3-209ENST00000493732 KIF1AQ12756 1690 aa11.84□□□□□ -0.51
NPHP3-209ENST00000493732 APBB1O00213 710 aa11.84□□□□□ -0.51
NPHP3-209ENST00000493732 TRAK2O60296 914 aa11.84□□□□□ -0.51
NPHP3-209ENST00000493732 MX1P20591 662 aa11.84□□□□□ -0.51
NPHP3-209ENST00000493732 SSH3Q8TE77 659 aa11.84□□□□□ -0.51
NPHP3-209ENST00000493732 USP44Q9H0E7 712 aa11.84□□□□□ -0.51
NPHP3-209ENST00000493732 BTBD11A6QL63 1104 aa11.83□□□□□ -0.52
NPHP3-209ENST00000493732 MCM2P49736 904 aa11.83□□□□□ -0.52
NPHP3-209ENST00000493732 NUCB2P80303 420 aa11.83□□□□□ -0.52
NPHP3-209ENST00000493732 CLEC17AQ6ZS10 378 aa11.83□□□□□ -0.52
NPHP3-209ENST00000493732 USHBP1Q8N6Y0 703 aa11.83□□□□□ -0.52
NPHP3-209ENST00000493732 OTUD7AQ8TE49 926 aaPredicted RBP11.83□□□□□ -0.52
NPHP3-209ENST00000493732 DBF4Q9UBU7 674 aaPredicted RBP11.83□□□□□ -0.52
NPHP3-209ENST00000493732 PLEKHG2Q9H7P9 1386 aa11.83□□□□□ -0.52
NPHP3-209ENST00000493732 KDM3BQ7LBC6 1761 aa11.83□□□□□ -0.52
NPHP3-209ENST00000493732 SALL3Q9BXA9 1300 aa11.82□□□□□ -0.52
NPHP3-209ENST00000493732 EXOC6BQ9Y2D4 811 aa11.82□□□□□ -0.52
NPHP3-209ENST00000493732 LRRFIP2Q9Y608 721 aaKnown RBP11.82□□□□□ -0.52
NPHP3-209ENST00000493732 GOLGA6L3A6NEY3 463 aa11.82□□□□□ -0.52
NPHP3-209ENST00000493732 ANAPC15P60006 121 aa11.82□□□□□ -0.52
NPHP3-209ENST00000493732 DNAAF4Q8WXU2 420 aa11.82□□□□□ -0.52
NPHP3-209ENST00000493732 NECTIN2Q92692 538 aa11.82□□□□□ -0.52
NPHP3-209ENST00000493732 TNPO1Q92973 898 aaKnown RBP11.82□□□□□ -0.52
NPHP3-209ENST00000493732 C19orf44Q9H6X5 657 aa11.82□□□□□ -0.52
NPHP3-209ENST00000493732 RNMTO43148 476 aaKnown RBP11.81□□□□□ -0.52
NPHP3-209ENST00000493732 PROSER2Q86WR7 435 aaPredicted RBP11.81□□□□□ -0.52
NPHP3-209ENST00000493732 PNMA6EA0A0J9YXQ4 647 aa11.8□□□□□ -0.52
NPHP3-209ENST00000493732 ALDH1L1O75891 902 aa11.8□□□□□ -0.52
NPHP3-209ENST00000493732 POLA2Q14181 598 aa11.8□□□□□ -0.52
NPHP3-209ENST00000493732 KRT28Q7Z3Y7 464 aa11.8□□□□□ -0.52
NPHP3-209ENST00000493732 ANKRD24Q8TF21 1146 aa11.8□□□□□ -0.52
NPHP3-209ENST00000493732 KIF1BPQ96EK5 621 aa11.8□□□□□ -0.52
NPHP3-209ENST00000493732 LGR6Q9HBX8 967 aa11.8□□□□□ -0.52
NPHP3-209ENST00000493732 CAMTA1Q9Y6Y1 1673 aa11.8□□□□□ -0.52
NPHP3-209ENST00000493732 ZBTB7CA1YPR0 619 aa11.8□□□□□ -0.52
NPHP3-209ENST00000493732 EIF2S2P20042 333 aaKnown RBP11.8□□□□□ -0.52
NPHP3-209ENST00000493732 PHAXQ9H814 394 aaKnown RBP11.8□□□□□ -0.52
NPHP3-209ENST00000493732 BEND3Q5T5X7 828 aa11.79□□□□□ -0.52
NPHP3-209ENST00000493732 ORAI2Q96SN7 254 aa11.79□□□□□ -0.52
NPHP3-209ENST00000493732 ESYT1Q9BSJ8 1104 aa11.79□□□□□ -0.52
NPHP3-209ENST00000493732 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
NPHP3-209ENST00000493732 HYPKQ9NX55 129 aa11.79□□□□□ -0.52
NPHP3-209ENST00000493732 CHPF2Q9P2E5 772 aa11.79□□□□□ -0.52
NPHP3-209ENST00000493732 CD2BP2O95400 341 aaKnown RBP11.78□□□□□ -0.52
NPHP3-209ENST00000493732 DDX58O95786 925 aaKnown RBP11.78□□□□□ -0.52
NPHP3-209ENST00000493732 MTX1Q13505 466 aa11.78□□□□□ -0.52
NPHP3-209ENST00000493732 PPP1R42Q7Z4L9 355 aa11.78□□□□□ -0.52
NPHP3-209ENST00000493732 C1orf167Q5SNV9 1468 aa11.78□□□□□ -0.52
NPHP3-209ENST00000493732 DCCP43146 1447 aa11.78□□□□□ -0.52
NPHP3-209ENST00000493732 HEG1Q9ULI3 1381 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms