RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 PRKAR2BP31323 418 aa9.31□□□□□ -0.92
TOP3A-207ENST00000493648 SIK1P57059 783 aa9.31□□□□□ -0.92
TOP3A-207ENST00000493648 ZNF827Q17R98 1081 aa9.31□□□□□ -0.92
TOP3A-207ENST00000493648 LGR6Q9HBX8 967 aa9.31□□□□□ -0.92
TOP3A-207ENST00000493648 ZNF316A6NFI3 1004 aaPredicted RBP9.3□□□□□ -0.92
TOP3A-207ENST00000493648 GNAT3A8MTJ3 354 aa9.3□□□□□ -0.92
TOP3A-207ENST00000493648 RNMTO43148 476 aaKnown RBP9.3□□□□□ -0.92
TOP3A-207ENST00000493648 ZBTB7AO95365 584 aa9.3□□□□□ -0.92
TOP3A-207ENST00000493648 ATP6V1AP38606 617 aa9.3□□□□□ -0.92
TOP3A-207ENST00000493648 FLAD1Q8NFF5 587 aa9.3□□□□□ -0.92
TOP3A-207ENST00000493648 SLC16A10Q8TF71 515 aa9.3□□□□□ -0.92
TOP3A-207ENST00000493648 RBM42Q9BTD8 480 aaKnown RBP9.3□□□□□ -0.92
TOP3A-207ENST00000493648 RSPH6AQ9H0K4 717 aa9.3□□□□□ -0.92
TOP3A-207ENST00000493648 PNNQ9H307 717 aaKnown RBP9.3□□□□□ -0.92
TOP3A-207ENST00000493648 PPP1R1BQ9UD71 204 aaPredicted RBP9.3□□□□□ -0.92
TOP3A-207ENST00000493648 KDM6AO15550 1401 aaPredicted RBP9.3□□□□□ -0.92
TOP3A-207ENST00000493648 PHACTR3Q96KR7 559 aa9.29□□□□□ -0.92
TOP3A-207ENST00000493648 AK7Q96M32 723 aa9.29□□□□□ -0.92
TOP3A-207ENST00000493648 PDGFDQ9GZP0 370 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-207ENST00000493648 MTFR1LQ9H019 292 aa9.29□□□□□ -0.92
TOP3A-207ENST00000493648 SLC52A2Q9HAB3 445 aa9.29□□□□□ -0.92
TOP3A-207ENST00000493648 ATF5Q9Y2D1 282 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-207ENST00000493648 LRP5O75197 1615 aa9.29□□□□□ -0.92
TOP3A-207ENST00000493648 PAPPAQ13219 1627 aa9.28□□□□□ -0.92
TOP3A-207ENST00000493648 SCN11AQ9UI33 1791 aa9.28□□□□□ -0.92
TOP3A-207ENST00000493648 PNPLA7Q6ZV29 1317 aa9.28□□□□□ -0.92
TOP3A-207ENST00000493648 MYBBP1AQ9BQG0 1328 aaKnown RBP9.28□□□□□ -0.92
TOP3A-207ENST00000493648 CASZ1Q86V15 1759 aa9.27□□□□□ -0.92
TOP3A-207ENST00000493648 MAP3K5Q99683 1374 aa9.27□□□□□ -0.93
TOP3A-207ENST00000493648 PTCD1O75127 700 aaKnown RBP9.27□□□□□ -0.93
TOP3A-207ENST00000493648 TEFQ10587 303 aa9.27□□□□□ -0.93
TOP3A-207ENST00000493648 ITPK1Q13572 414 aa9.27□□□□□ -0.93
TOP3A-207ENST00000493648 RTF1Q92541 710 aaKnown RBP9.27□□□□□ -0.93
TOP3A-207ENST00000493648 TAF1LQ8IZX4 1826 aa9.26□□□□□ -0.93
TOP3A-207ENST00000493648 C5P01031 1676 aa9.26□□□□□ -0.93
TOP3A-207ENST00000493648 QSER1Q2KHR3 1735 aa9.26□□□□□ -0.93
TOP3A-207ENST00000493648 HTATSF1O43719 755 aaKnown RBP9.26□□□□□ -0.93
TOP3A-207ENST00000493648 POLD1P28340 1107 aa9.26□□□□□ -0.93
TOP3A-207ENST00000493648 COL23A1Q86Y22 540 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-207ENST00000493648 LINC00116Q8NCU8 138 aa9.26□□□□□ -0.93
TOP3A-207ENST00000493648 IL17REQ8NFR9 667 aa9.26□□□□□ -0.93
TOP3A-207ENST00000493648 PRKRIP1Q9H875 184 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-207ENST00000493648 NPM3O75607 178 aaKnown RBP9.25□□□□□ -0.93
TOP3A-207ENST00000493648 SSFA2P28290 1259 aa9.25□□□□□ -0.93
TOP3A-207ENST00000493648 PTGER2P43116 358 aa9.25□□□□□ -0.93
TOP3A-207ENST00000493648 SLC39A6Q13433 755 aa9.25□□□□□ -0.93
TOP3A-207ENST00000493648 RC3H1Q5TC82 1133 aaKnown RBP9.25□□□□□ -0.93
TOP3A-207ENST00000493648 TTC5Q8N0Z6 440 aa9.25□□□□□ -0.93
TOP3A-207ENST00000493648 SLC4A9Q96Q91 983 aa9.25□□□□□ -0.93
TOP3A-207ENST00000493648 RTCBQ9Y3I0 505 aaKnown RBP9.25□□□□□ -0.93
TOP3A-207ENST00000493648 VIRMAQ69YN4 1812 aaKnown RBP9.25□□□□□ -0.93
TOP3A-207ENST00000493648 C4BP0C0L5 1744 aa9.25□□□□□ -0.93
TOP3A-207ENST00000493648 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.24□□□□□ -0.93
TOP3A-207ENST00000493648 GNPATO15228 680 aa9.24□□□□□ -0.93
TOP3A-207ENST00000493648 PHF14O94880 888 aa9.24□□□□□ -0.93
TOP3A-207ENST00000493648 WDR43Q15061 677 aaKnown RBP eCLIP9.24□□□□□ -0.93
TOP3A-207ENST00000493648 TRAPPC3LQ5T215 181 aa9.24□□□□□ -0.93
TOP3A-207ENST00000493648 ARXQ96QS3 562 aa9.24□□□□□ -0.93
TOP3A-207ENST00000493648 PLEKHF1Q96S99 279 aa9.24□□□□□ -0.93
TOP3A-207ENST00000493648 MAPK8IP3Q9UPT6 1336 aa9.24□□□□□ -0.93
TOP3A-207ENST00000493648 ZNF831Q5JPB2 1677 aa9.23□□□□□ -0.93
TOP3A-207ENST00000493648 BTBD11A6QL63 1104 aa9.23□□□□□ -0.93
TOP3A-207ENST00000493648 RPS6KA4O75676 772 aa9.23□□□□□ -0.93
TOP3A-207ENST00000493648 POTEHQ6S545 545 aa9.23□□□□□ -0.93
TOP3A-207ENST00000493648 MCM10Q7L590 875 aa9.23□□□□□ -0.93
TOP3A-207ENST00000493648 SGIP1Q9BQI5 828 aa9.23□□□□□ -0.93
TOP3A-207ENST00000493648 TEX13AQ9BXU3 409 aaPredicted RBP9.23□□□□□ -0.93
TOP3A-207ENST00000493648 TUBGCP6Q96RT7 1819 aa9.23□□□□□ -0.93
TOP3A-207ENST00000493648 CNTNAP4Q9C0A0 1308 aa9.23□□□□□ -0.93
TOP3A-207ENST00000493648 ADAMTS7Q9UKP4 1686 aa9.23□□□□□ -0.93
TOP3A-207ENST00000493648 MRC1P22897 1456 aa9.22□□□□□ -0.93
TOP3A-207ENST00000493648 TAF7Q15545 349 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-207ENST00000493648 NFE2L2Q16236 605 aa9.22□□□□□ -0.93
TOP3A-207ENST00000493648 ZNF790Q6PG37 636 aa9.22□□□□□ -0.93
TOP3A-207ENST00000493648 DNAJC10Q8IXB1 793 aa9.22□□□□□ -0.93
TOP3A-207ENST00000493648 VSIG10Q8N0Z9 540 aa9.22□□□□□ -0.93
TOP3A-207ENST00000493648 CEMIPQ8WUJ3 1361 aa9.22□□□□□ -0.93
TOP3A-207ENST00000493648 ANP32CO43423 234 aa9.21□□□□□ -0.94
TOP3A-207ENST00000493648 STARD3NLO95772 234 aa9.21□□□□□ -0.94
TOP3A-207ENST00000493648 RFC4P35249 363 aa9.21□□□□□ -0.94
TOP3A-207ENST00000493648 CRKLP46109 303 aaKnown RBP9.21□□□□□ -0.94
TOP3A-207ENST00000493648 DCTN1Q14203 1278 aa9.21□□□□□ -0.94
TOP3A-207ENST00000493648 SMIM5Q71RC9 77 aa9.21□□□□□ -0.94
TOP3A-207ENST00000493648 ARHGEF1Q92888 912 aaKnown RBP9.21□□□□□ -0.94
TOP3A-207ENST00000493648 FMNL2Q96PY5 1086 aa9.21□□□□□ -0.94
TOP3A-207ENST00000493648 FHDC1Q9C0D6 1143 aaPredicted RBP9.21□□□□□ -0.94
TOP3A-207ENST00000493648 UBR3Q6ZT12 1888 aa9.21□□□□□ -0.94
TOP3A-207ENST00000493648 CYP19A1P11511 503 aaPredicted RBP9.2□□□□□ -0.94
TOP3A-207ENST00000493648 RIPK4P57078 832 aa9.2□□□□□ -0.94
TOP3A-207ENST00000493648 MSL1Q68DK7 614 aa9.2□□□□□ -0.94
TOP3A-207ENST00000493648 INTS5Q6P9B9 1019 aaKnown RBP9.2□□□□□ -0.94
TOP3A-207ENST00000493648 AMIGO3Q86WK7 504 aa9.2□□□□□ -0.94
TOP3A-207ENST00000493648 NLGN1Q8N2Q7 840 aa9.2□□□□□ -0.94
TOP3A-207ENST00000493648 PNISRQ8TF01 805 aaKnown RBP9.2□□□□□ -0.94
TOP3A-207ENST00000493648 RUNDC1Q96C34 613 aa9.2□□□□□ -0.94
TOP3A-207ENST00000493648 ZNF496Q96IT1 587 aaPredicted RBP9.2□□□□□ -0.94
TOP3A-207ENST00000493648 SYT17Q9BSW7 474 aa9.2□□□□□ -0.94
TOP3A-207ENST00000493648 CCDC87Q9NVE4 849 aa9.2□□□□□ -0.94
TOP3A-207ENST00000493648 ADAMTS8Q9UP79 889 aa9.2□□□□□ -0.94
TOP3A-207ENST00000493648 COL5A3P25940 1745 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms