RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 ADRA2BP18089 450 aa15.21■□□□□ 0.03
SNRNP200-207ENST00000493271 ASAP1Q9ULH1 1129 aa15.21■□□□□ 0.03
SNRNP200-207ENST00000493271 RTCBQ9Y3I0 505 aaKnown RBP15.21■□□□□ 0.03
SNRNP200-207ENST00000493271 ERVV-2B6SEH9 535 aa15.2■□□□□ 0.02
SNRNP200-207ENST00000493271 TRAPPC3LQ5T215 181 aa15.2■□□□□ 0.02
SNRNP200-207ENST00000493271 ZNF526Q8TF50 670 aaPredicted RBP15.2■□□□□ 0.02
SNRNP200-207ENST00000493271 ATG3Q9NT62 314 aa15.2■□□□□ 0.02
SNRNP200-207ENST00000493271 MMP10P09238 476 aa15.19■□□□□ 0.02
SNRNP200-207ENST00000493271 ITPK1Q13572 414 aa15.19■□□□□ 0.02
SNRNP200-207ENST00000493271 RC3H1Q5TC82 1133 aaKnown RBP15.19■□□□□ 0.02
SNRNP200-207ENST00000493271 POLKQ9UBT6 870 aa15.19■□□□□ 0.02
SNRNP200-207ENST00000493271 KDRP35968 1356 aa15.19■□□□□ 0.02
SNRNP200-207ENST00000493271 KIF13BQ9NQT8 1826 aa15.19■□□□□ 0.02
SNRNP200-207ENST00000493271 PXDNLA1KZ92 1463 aa15.18■□□□□ 0.02
SNRNP200-207ENST00000493271 CNTNAP4Q9C0A0 1308 aa15.17■□□□□ 0.02
SNRNP200-207ENST00000493271 KIF3CO14782 793 aa15.17■□□□□ 0.02
SNRNP200-207ENST00000493271 DCAF5Q96JK2 942 aa15.17■□□□□ 0.02
SNRNP200-207ENST00000493271 CCDC87Q9NVE4 849 aa15.17■□□□□ 0.02
SNRNP200-207ENST00000493271 C10orf71Q711Q0 1435 aa15.17■□□□□ 0.02
SNRNP200-207ENST00000493271 APLP1P51693 650 aa15.16■□□□□ 0.02
SNRNP200-207ENST00000493271 EIF4A2Q14240 407 aaKnown RBP15.16■□□□□ 0.02
SNRNP200-207ENST00000493271 SMIM5Q71RC9 77 aa15.16■□□□□ 0.02
SNRNP200-207ENST00000493271 RPS6KA4O75676 772 aa15.15■□□□□ 0.02
SNRNP200-207ENST00000493271 TOMM70O94826 608 aa15.15■□□□□ 0.02
SNRNP200-207ENST00000493271 RFC4P35249 363 aa15.15■□□□□ 0.02
SNRNP200-207ENST00000493271 AMOTQ4VCS5 1084 aa15.15■□□□□ 0.02
SNRNP200-207ENST00000493271 PLEKHO1Q53GL0 409 aaPredicted RBP15.15■□□□□ 0.02
SNRNP200-207ENST00000493271 WWC3Q9ULE0 1092 aa15.14■□□□□ 0.01
SNRNP200-207ENST00000493271 BCS1LQ9Y276 419 aa15.14■□□□□ 0.01
SNRNP200-207ENST00000493271 PARP3Q9Y6F1 533 aa15.14■□□□□ 0.01
SNRNP200-207ENST00000493271 KIAA1551Q9HCM1 1747 aa15.14■□□□□ 0.01
SNRNP200-207ENST00000493271 C4AP0C0L4 1744 aa15.13■□□□□ 0.01
SNRNP200-207ENST00000493271 COL5A3P25940 1745 aaPredicted RBP15.13■□□□□ 0.01
SNRNP200-207ENST00000493271 ARHGEF1Q92888 912 aaKnown RBP15.13■□□□□ 0.01
SNRNP200-207ENST00000493271 RBM42Q9BTD8 480 aaKnown RBP15.13■□□□□ 0.01
SNRNP200-207ENST00000493271 GYS1P13807 737 aa15.12■□□□□ 0.01
SNRNP200-207ENST00000493271 A0A0G2JLW4 131 aa15.11■□□□□ 0.01
SNRNP200-207ENST00000493271 CABP4P57796 275 aa15.11■□□□□ 0.01
SNRNP200-207ENST00000493271 ARHGAP27Q6ZUM4 889 aa15.11■□□□□ 0.01
SNRNP200-207ENST00000493271 SLC4A9Q96Q91 983 aa15.11■□□□□ 0.01
SNRNP200-207ENST00000493271 CLSPNQ9HAW4 1339 aa15.11■□□□□ 0.01
SNRNP200-207ENST00000493271 FCHSD2O94868 740 aa15.1■□□□□ 0.01
SNRNP200-207ENST00000493271 C1orf141Q5JVX7 400 aa15.1■□□□□ 0.01
SNRNP200-207ENST00000493271 KDM6AO15550 1401 aaPredicted RBP15.09■□□□□ 0.01
SNRNP200-207ENST00000493271 N4BP2Q86UW6 1770 aaPredicted RBP15.09■□□□□ 0.01
SNRNP200-207ENST00000493271 DPEP1P16444 411 aa15.09■□□□□ 0.01
SNRNP200-207ENST00000493271 ZNF530Q6P9A1 599 aaPredicted RBP15.09■□□□□ 0.01
SNRNP200-207ENST00000493271 PIM2Q9P1W9 311 aa15.09■□□□□ 0.01
SNRNP200-207ENST00000493271 BRCA1P38398 1863 aaKnown RBP15.08■□□□□ 0.01
SNRNP200-207ENST00000493271 TNNT2P45379 298 aaPredicted RBP15.08■□□□□ 0
SNRNP200-207ENST00000493271 MTHFSP49914 203 aa15.08■□□□□ 0
SNRNP200-207ENST00000493271 TRIM26Q12899 539 aaPredicted RBP15.08■□□□□ 0
SNRNP200-207ENST00000493271 RBM46Q8TBY0 533 aaKnown RBP15.08■□□□□ 0
SNRNP200-207ENST00000493271 C16orf71Q8IYS4 520 aaPredicted RBP15.07■□□□□ 0
SNRNP200-207ENST00000493271 ARFGEF1Q9Y6D6 1849 aa15.07■□□□□ 0
SNRNP200-207ENST00000493271 KDM2BQ8NHM5 1336 aa15.07■□□□□ 0
SNRNP200-207ENST00000493271 USP42Q9H9J4 1324 aaKnown RBP15.07■□□□□ 0
SNRNP200-207ENST00000493271 CRKLP46109 303 aaKnown RBP15.06■□□□□ 0
SNRNP200-207ENST00000493271 FSTL1Q12841 308 aa15.06■□□□□ 0
SNRNP200-207ENST00000493271 DALRD3Q5D0E6 543 aaKnown RBP15.06■□□□□ 0
SNRNP200-207ENST00000493271 KCNA3P22001 575 aa15.05■□□□□ -0
SNRNP200-207ENST00000493271 C9orf131Q5VYM1 1079 aa15.05■□□□□ -0
SNRNP200-207ENST00000493271 POLR3GLQ9BT43 218 aa15.05■□□□□ -0
SNRNP200-207ENST00000493271 ZC3H4Q9UPT8 1303 aaKnown RBP15.05■□□□□ -0
SNRNP200-207ENST00000493271 PTCD1O75127 700 aaKnown RBP15.04■□□□□ -0
SNRNP200-207ENST00000493271 DNAJC5GQ8N7S2 189 aa15.04■□□□□ -0
SNRNP200-207ENST00000493271 NFATC2IPQ8NCF5 419 aa15.04■□□□□ -0
SNRNP200-207ENST00000493271 NMRK2Q9NPI5 230 aa15.04■□□□□ -0
SNRNP200-207ENST00000493271 MYH14Q7Z406 1995 aaKnown RBP15.04■□□□□ -0
SNRNP200-207ENST00000493271 EIF4G2P78344 907 aaKnown RBP eCLIP15.03■□□□□ -0
SNRNP200-207ENST00000493271 PANK3Q9H999 370 aa15.03■□□□□ -0
SNRNP200-207ENST00000493271 FKBP8Q14318 412 aa15.02■□□□□ -0
SNRNP200-207ENST00000493271 MORC1Q86VD1 984 aa15.02■□□□□ -0
SNRNP200-207ENST00000493271 WDR90Q96KV7 1748 aa15.02□□□□□ -0.01
SNRNP200-207ENST00000493271 TJP1Q07157 1748 aa15.01□□□□□ -0.01
SNRNP200-207ENST00000493271 ZPR1O75312 459 aa15.01□□□□□ -0.01
SNRNP200-207ENST00000493271 DDR1Q08345 913 aa15.01□□□□□ -0.01
SNRNP200-207ENST00000493271 AKAP4Q5JQC9 854 aa15.01□□□□□ -0.01
SNRNP200-207ENST00000493271 SULT6B1Q6IMI4 303 aa15.01□□□□□ -0.01
SNRNP200-207ENST00000493271 RNF181Q9P0P0 153 aa15.01□□□□□ -0.01
SNRNP200-207ENST00000493271 TNRC6CQ9HCJ0 1690 aaKnown RBP15□□□□□ -0.01
SNRNP200-207ENST00000493271 POLRMTO00411 1230 aaKnown RBP15□□□□□ -0.01
SNRNP200-207ENST00000493271 TM4SF1P30408 202 aa15□□□□□ -0.01
SNRNP200-207ENST00000493271 INTS5Q6P9B9 1019 aaKnown RBP15□□□□□ -0.01
SNRNP200-207ENST00000493271 AEBP1Q8IUX7 1158 aa15□□□□□ -0.01
SNRNP200-207ENST00000493271 SRP68Q9UHB9 627 aaKnown RBP15□□□□□ -0.01
SNRNP200-207ENST00000493271 SCN11AQ9UI33 1791 aa15□□□□□ -0.01
SNRNP200-207ENST00000493271 JMYQ8N9B5 988 aa14.99□□□□□ -0.01
SNRNP200-207ENST00000493271 KLRG1Q96E93 195 aa14.99□□□□□ -0.01
SNRNP200-207ENST00000493271 SLC52A2Q9HAB3 445 aa14.99□□□□□ -0.01
SNRNP200-207ENST00000493271 SOS1Q07889 1333 aaPredicted RBP14.98□□□□□ -0.01
SNRNP200-207ENST00000493271 KCPQ6ZWJ8 1503 aa14.98□□□□□ -0.01
SNRNP200-207ENST00000493271 ADAMTS7Q9UKP4 1686 aa14.98□□□□□ -0.01
SNRNP200-207ENST00000493271 MRC1P22897 1456 aa14.98□□□□□ -0.01
SNRNP200-207ENST00000493271 IL13P35225 146 aa14.98□□□□□ -0.01
SNRNP200-207ENST00000493271 VSIG10Q8N0Z9 540 aa14.98□□□□□ -0.01
SNRNP200-207ENST00000493271 NARFQ9UHQ1 456 aa14.98□□□□□ -0.01
SNRNP200-207ENST00000493271 KNSTRNQ9Y448 316 aa14.98□□□□□ -0.01
SNRNP200-207ENST00000493271 USPL1Q5W0Q7 1092 aa14.97□□□□□ -0.01
SNRNP200-207ENST00000493271 SMC1BQ8NDV3 1235 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms