RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 FOXJ1Q92949 421 aa7.79□□□□□ -1.16
SND1-216ENST00000492840 DSC3Q14574 896 aa7.78□□□□□ -1.16
SND1-216ENST00000492840 METTL16Q86W50 562 aaKnown RBP7.78□□□□□ -1.16
SND1-216ENST00000492840 SEPT12Q8IYM1 358 aa7.78□□□□□ -1.16
SND1-216ENST00000492840 ZNF687Q8N1G0 1237 aa7.78□□□□□ -1.16
SND1-216ENST00000492840 C1QTNF2Q9BXJ5 285 aa7.78□□□□□ -1.16
SND1-216ENST00000492840 FANCD2Q9BXW9 1451 aa7.77□□□□□ -1.17
SND1-216ENST00000492840 TLL1O43897 1013 aa7.77□□□□□ -1.17
SND1-216ENST00000492840 AGERQ15109 404 aa7.77□□□□□ -1.17
SND1-216ENST00000492840 LINC01559Q495D7 138 aa7.77□□□□□ -1.17
SND1-216ENST00000492840 ADGRD1Q6QNK2 874 aa7.77□□□□□ -1.17
SND1-216ENST00000492840 BAP1Q92560 729 aa7.77□□□□□ -1.17
SND1-216ENST00000492840 FAM161BQ96MY7 647 aa7.77□□□□□ -1.17
SND1-216ENST00000492840 PARP2Q9UGN5 583 aa7.77□□□□□ -1.17
SND1-216ENST00000492840 BRPF3Q9ULD4 1205 aa7.77□□□□□ -1.17
SND1-216ENST00000492840 TMEM229AB2RXF0 380 aa7.76□□□□□ -1.17
SND1-216ENST00000492840 HRO43593 1189 aa7.76□□□□□ -1.17
SND1-216ENST00000492840 PRPF40AO75400 957 aaKnown RBP7.76□□□□□ -1.17
SND1-216ENST00000492840 ADH1BP00325 375 aa7.76□□□□□ -1.17
SND1-216ENST00000492840 MYCP01106 439 aaPredicted RBP7.76□□□□□ -1.17
SND1-216ENST00000492840 LDHBP07195 334 aaKnown RBP7.76□□□□□ -1.17
SND1-216ENST00000492840 COPS2P61201 443 aa7.76□□□□□ -1.17
SND1-216ENST00000492840 XPCQ01831 940 aaPredicted RBP7.76□□□□□ -1.17
SND1-216ENST00000492840 ZNF511Q8NB15 262 aa7.76□□□□□ -1.17
SND1-216ENST00000492840 SCG3Q8WXD2 468 aaKnown RBP7.76□□□□□ -1.17
SND1-216ENST00000492840 CITED4Q96RK1 184 aa7.76□□□□□ -1.17
SND1-216ENST00000492840 TINF2Q9BSI4 451 aa7.76□□□□□ -1.17
SND1-216ENST00000492840 PPM1GO15355 546 aaPredicted RBP7.75□□□□□ -1.17
SND1-216ENST00000492840 FGD1P98174 961 aa7.75□□□□□ -1.17
SND1-216ENST00000492840 TMC4Q7Z404 712 aa7.75□□□□□ -1.17
SND1-216ENST00000492840 NT5DC4Q86YG4 428 aa7.75□□□□□ -1.17
SND1-216ENST00000492840 TRMT44Q8IYL2 757 aaKnown RBP7.75□□□□□ -1.17
SND1-216ENST00000492840 TMEM87AQ8NBN3 555 aa7.75□□□□□ -1.17
SND1-216ENST00000492840 DUSP9Q99956 384 aaKnown RBP7.75□□□□□ -1.17
SND1-216ENST00000492840 PRKD2Q9BZL6 878 aa7.75□□□□□ -1.17
SND1-216ENST00000492840 MRS2Q9HD23 443 aa7.75□□□□□ -1.17
SND1-216ENST00000492840 CDV3Q9UKY7 258 aaKnown RBP7.75□□□□□ -1.17
SND1-216ENST00000492840 CHD1O14646 1710 aa7.75□□□□□ -1.17
SND1-216ENST00000492840 GOLGA8CPA6NN73 597 aa7.74□□□□□ -1.17
SND1-216ENST00000492840 FZD6O60353 706 aa7.74□□□□□ -1.17
SND1-216ENST00000492840 IGHA2P01877 340 aa7.74□□□□□ -1.17
SND1-216ENST00000492840 MAPK8P45983 427 aa7.74□□□□□ -1.17
SND1-216ENST00000492840 SCTRP47872 440 aa7.74□□□□□ -1.17
SND1-216ENST00000492840 FANCCQ00597 558 aa7.74□□□□□ -1.17
SND1-216ENST00000492840 EHHADHQ08426 723 aa7.74□□□□□ -1.17
SND1-216ENST00000492840 DMRTB1Q96MA1 342 aa7.74□□□□□ -1.17
SND1-216ENST00000492840 SAP130Q9H0E3 1048 aa7.74□□□□□ -1.17
SND1-216ENST00000492840 RNF19AQ9NV58 838 aa7.74□□□□□ -1.17
SND1-216ENST00000492840 URB2Q14146 1524 aaKnown RBP7.73□□□□□ -1.17
SND1-216ENST00000492840 ITGAEP38570 1179 aa7.73□□□□□ -1.17
SND1-216ENST00000492840 EIF1AXP47813 144 aaKnown RBP7.73□□□□□ -1.17
SND1-216ENST00000492840 SCNN1DP51172 638 aa7.73□□□□□ -1.17
SND1-216ENST00000492840 EPHA4P54764 986 aa7.73□□□□□ -1.17
SND1-216ENST00000492840 DAB2P98082 770 aa7.73□□□□□ -1.17
SND1-216ENST00000492840 PLCB3Q01970 1234 aa7.73□□□□□ -1.17
SND1-216ENST00000492840 C16orf46Q6P387 395 aa7.73□□□□□ -1.17
SND1-216ENST00000492840 GIMAP6Q6P9H5 292 aa7.73□□□□□ -1.17
SND1-216ENST00000492840 DPH6Q7L8W6 267 aa7.73□□□□□ -1.17
SND1-216ENST00000492840 TNS4Q8IZW8 715 aa7.73□□□□□ -1.17
SND1-216ENST00000492840 TMC1Q8TDI8 760 aa7.73□□□□□ -1.17
SND1-216ENST00000492840 VTI1AQ96AJ9 217 aa7.73□□□□□ -1.17
SND1-216ENST00000492840 FAM129BQ96TA1 746 aa7.73□□□□□ -1.17
SND1-216ENST00000492840 TANGO6Q9C0B7 1094 aa7.73□□□□□ -1.17
SND1-216ENST00000492840 TGIF2Q9GZN2 237 aa7.73□□□□□ -1.17
SND1-216ENST00000492840 METTL5Q9NRN9 209 aaKnown RBP7.73□□□□□ -1.17
SND1-216ENST00000492840 CCDC87Q9NVE4 849 aa7.73□□□□□ -1.17
SND1-216ENST00000492840 ATAD2Q6PL18 1390 aa7.72□□□□□ -1.17
SND1-216ENST00000492840 WASLO00401 505 aaPredicted RBP7.72□□□□□ -1.17
SND1-216ENST00000492840 GPR182O15218 404 aa7.72□□□□□ -1.17
SND1-216ENST00000492840 SORBS3O60504 671 aa7.72□□□□□ -1.17
SND1-216ENST00000492840 EMP3P54852 163 aa7.72□□□□□ -1.17
SND1-216ENST00000492840 RAB15P59190 212 aa7.72□□□□□ -1.17
SND1-216ENST00000492840 TSPAN10Q9H1Z9 355 aaPredicted RBP7.72□□□□□ -1.17
SND1-216ENST00000492840 WBP1LQ9NX94 342 aa7.72□□□□□ -1.17
SND1-216ENST00000492840 VTI1BQ9UEU0 232 aa7.72□□□□□ -1.17
SND1-216ENST00000492840 IFT140Q96RY7 1462 aa7.72□□□□□ -1.17
SND1-216ENST00000492840 TNFRSF10BO14763 440 aa7.71□□□□□ -1.18
SND1-216ENST00000492840 GDF10P55107 478 aa7.71□□□□□ -1.18
SND1-216ENST00000492840 LSM11P83369 360 aaKnown RBP eCLIP7.71□□□□□ -1.18
SND1-216ENST00000492840 PSMD2Q13200 908 aa7.71□□□□□ -1.18
SND1-216ENST00000492840 ALKBH2Q6NS38 261 aa7.71□□□□□ -1.18
SND1-216ENST00000492840 SLC43A3Q8NBI5 491 aa7.71□□□□□ -1.18
SND1-216ENST00000492840 WNT2BQ93097 391 aa7.71□□□□□ -1.18
SND1-216ENST00000492840 RNF34Q969K3 372 aa7.71□□□□□ -1.18
SND1-216ENST00000492840 ALKBH8Q96BT7 664 aaKnown RBP7.71□□□□□ -1.18
SND1-216ENST00000492840 KCTD15Q96SI1 283 aaPredicted RBP7.71□□□□□ -1.18
SND1-216ENST00000492840 CCSER2Q9H7U1 834 aa7.71□□□□□ -1.18
SND1-216ENST00000492840 WWC3Q9ULE0 1092 aa7.71□□□□□ -1.18
SND1-216ENST00000492840 ZNF608Q9ULD9 1512 aaPredicted RBP7.71□□□□□ -1.18
SND1-216ENST00000492840 EIF4G3O43432 1585 aaKnown RBP7.71□□□□□ -1.18
SND1-216ENST00000492840 BACH1O14867 736 aa7.7□□□□□ -1.18
SND1-216ENST00000492840 ZPR1O75312 459 aa7.7□□□□□ -1.18
SND1-216ENST00000492840 STAU1O95793 577 aaKnown RBP7.7□□□□□ -1.18
SND1-216ENST00000492840 ERVK-9P63128 1117 aa7.7□□□□□ -1.18
SND1-216ENST00000492840 CHMP7Q8WUX9 453 aaPredicted RBP7.7□□□□□ -1.18
SND1-216ENST00000492840 SETDB2Q96T68 719 aa7.7□□□□□ -1.18
SND1-216ENST00000492840 DNAJC2Q99543 621 aaKnown RBP7.7□□□□□ -1.18
SND1-216ENST00000492840 A0A1W2PRU2 124 aa7.69□□□□□ -1.18
SND1-216ENST00000492840 ZNF76P36508 570 aa7.69□□□□□ -1.18
SND1-216ENST00000492840 ATP2B2Q01814 1243 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms