RNA–Protein interactions for RNA: ENST00000492337.5

SOX2-OT-213, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 2,508 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-213ENST00000492337 CCDC173Q0VFZ6 552 aa12.39□□□□□ -0.43
SOX2-OT-213ENST00000492337 RTF1Q92541 710 aaKnown RBP12.39□□□□□ -0.43
SOX2-OT-213ENST00000492337 ZDHHC9Q9Y397 364 aa12.39□□□□□ -0.43
SOX2-OT-213ENST00000492337 NWD1Q149M9 1564 aa12.39□□□□□ -0.43
SOX2-OT-213ENST00000492337 ARHGAP23Q9P227 1491 aa12.39□□□□□ -0.43
SOX2-OT-213ENST00000492337 SLIT1O75093 1534 aa12.39□□□□□ -0.43
SOX2-OT-213ENST00000492337 F6X3S4 739 aa12.39□□□□□ -0.43
SOX2-OT-213ENST00000492337 PKP1Q13835 747 aa12.39□□□□□ -0.43
SOX2-OT-213ENST00000492337 MIS18AQ9NYP9 233 aa12.39□□□□□ -0.43
SOX2-OT-213ENST00000492337 KIF13AQ9H1H9 1805 aa12.39□□□□□ -0.43
SOX2-OT-213ENST00000492337 EYA1Q99502 592 aa12.38□□□□□ -0.43
SOX2-OT-213ENST00000492337 MCTP1Q6DN14 999 aa12.38□□□□□ -0.43
SOX2-OT-213ENST00000492337 ZGPATQ8N5A5 531 aaKnown RBP12.38□□□□□ -0.43
SOX2-OT-213ENST00000492337 BABAM1Q9NWV8 329 aa12.38□□□□□ -0.43
SOX2-OT-213ENST00000492337 STAP2Q9UGK3 403 aa12.38□□□□□ -0.43
SOX2-OT-213ENST00000492337 AK9Q5TCS8 1911 aa12.37□□□□□ -0.43
SOX2-OT-213ENST00000492337 CACNA1FO60840 1977 aa12.37□□□□□ -0.43
SOX2-OT-213ENST00000492337 DIP2AQ14689 1571 aa12.37□□□□□ -0.43
SOX2-OT-213ENST00000492337 GNAI3P08754 354 aa12.37□□□□□ -0.43
SOX2-OT-213ENST00000492337 NASPP49321 788 aaPredicted RBP12.37□□□□□ -0.43
SOX2-OT-213ENST00000492337 ATP8B2P98198 1209 aa12.37□□□□□ -0.43
SOX2-OT-213ENST00000492337 MARF1Q9Y4F3 1742 aaKnown RBP12.37□□□□□ -0.43
SOX2-OT-213ENST00000492337 APBB1O00213 710 aa12.37□□□□□ -0.43
SOX2-OT-213ENST00000492337 MCM2P49736 904 aa12.37□□□□□ -0.43
SOX2-OT-213ENST00000492337 ANAPC15P60006 121 aa12.37□□□□□ -0.43
SOX2-OT-213ENST00000492337 FLIIQ13045 1269 aa12.37□□□□□ -0.43
SOX2-OT-213ENST00000492337 ESYT1Q9BSJ8 1104 aa12.37□□□□□ -0.43
SOX2-OT-213ENST00000492337 EPB41L2O43491 1005 aaKnown RBP12.36□□□□□ -0.43
SOX2-OT-213ENST00000492337 AOX1Q06278 1338 aa12.36□□□□□ -0.43
SOX2-OT-213ENST00000492337 CUL4AQ13619 759 aa12.36□□□□□ -0.43
SOX2-OT-213ENST00000492337 SLC4A10Q6U841 1118 aa12.36□□□□□ -0.43
SOX2-OT-213ENST00000492337 TRIM44Q96DX7 344 aaPredicted RBP12.36□□□□□ -0.43
SOX2-OT-213ENST00000492337 STK31Q9BXU1 1019 aa12.36□□□□□ -0.43
SOX2-OT-213ENST00000492337 LRRCC1Q9C099 1032 aa12.36□□□□□ -0.43
SOX2-OT-213ENST00000492337 ZSCAN23Q3MJ62 389 aa12.36□□□□□ -0.43
SOX2-OT-213ENST00000492337 CCDC30Q5VVM6 783 aa12.36□□□□□ -0.43
SOX2-OT-213ENST00000492337 TBX22Q9Y458 520 aa12.36□□□□□ -0.43
SOX2-OT-213ENST00000492337 NUTM2FA1L443 756 aa12.35□□□□□ -0.43
SOX2-OT-213ENST00000492337 ANKARQ7Z5J8 1434 aa12.35□□□□□ -0.43
SOX2-OT-213ENST00000492337 MX1P20591 662 aa12.35□□□□□ -0.43
SOX2-OT-213ENST00000492337 SRCIN1Q9C0H9 1055 aa12.35□□□□□ -0.43
SOX2-OT-213ENST00000492337 EXOC6BQ9Y2D4 811 aa12.35□□□□□ -0.43
SOX2-OT-213ENST00000492337 PNMA6EA0A0J9YXQ4 647 aa12.34□□□□□ -0.43
SOX2-OT-213ENST00000492337 CHMLP26374 656 aa12.34□□□□□ -0.43
SOX2-OT-213ENST00000492337 GPT2Q8TD30 523 aa12.34□□□□□ -0.43
SOX2-OT-213ENST00000492337 TMX3Q96JJ7 454 aa12.34□□□□□ -0.43
SOX2-OT-213ENST00000492337 AMOTL2Q9Y2J4 779 aa12.34□□□□□ -0.43
SOX2-OT-213ENST00000492337 GNAT3A8MTJ3 354 aa12.34□□□□□ -0.43
SOX2-OT-213ENST00000492337 PRKCSHP14314 528 aaPredicted RBP12.34□□□□□ -0.43
SOX2-OT-213ENST00000492337 CAVIN1Q6NZI2 390 aaKnown RBP12.34□□□□□ -0.43
SOX2-OT-213ENST00000492337 INTS4Q96HW7 963 aaKnown RBP12.34□□□□□ -0.43
SOX2-OT-213ENST00000492337 RGPD8O14715 1765 aaPredicted RBP12.33□□□□□ -0.44
SOX2-OT-213ENST00000492337 AMPHP49418 695 aa12.33□□□□□ -0.44
SOX2-OT-213ENST00000492337 HS1BP3Q53T59 392 aa12.33□□□□□ -0.44
SOX2-OT-213ENST00000492337 PDLIM2Q96JY6 352 aa12.33□□□□□ -0.44
SOX2-OT-213ENST00000492337 MAP3K5Q99683 1374 aa12.33□□□□□ -0.44
SOX2-OT-213ENST00000492337 BRD1O95696 1058 aa12.33□□□□□ -0.44
SOX2-OT-213ENST00000492337 SOX12O15370 315 aa12.32□□□□□ -0.44
SOX2-OT-213ENST00000492337 HOXC9P31274 260 aa12.32□□□□□ -0.44
SOX2-OT-213ENST00000492337 NEK4P51957 841 aa12.32□□□□□ -0.44
SOX2-OT-213ENST00000492337 FKBP5Q13451 457 aaPredicted RBP12.32□□□□□ -0.44
SOX2-OT-213ENST00000492337 IL17REQ8NFR9 667 aa12.32□□□□□ -0.44
SOX2-OT-213ENST00000492337 SLC26A8Q96RN1 970 aa12.32□□□□□ -0.44
SOX2-OT-213ENST00000492337 MED1Q15648 1581 aaPredicted RBP12.32□□□□□ -0.44
SOX2-OT-213ENST00000492337 MCCP23508 829 aa12.32□□□□□ -0.44
SOX2-OT-213ENST00000492337 ZSCAN30Q86W11 494 aa12.32□□□□□ -0.44
SOX2-OT-213ENST00000492337 SSH3Q8TE77 659 aa12.32□□□□□ -0.44
SOX2-OT-213ENST00000492337 NAP1L5Q96NT1 182 aaPredicted RBP12.32□□□□□ -0.44
SOX2-OT-213ENST00000492337 USP44Q9H0E7 712 aa12.32□□□□□ -0.44
SOX2-OT-213ENST00000492337 PALD1Q9ULE6 856 aa12.32□□□□□ -0.44
SOX2-OT-213ENST00000492337 PRPF40AO75400 957 aaKnown RBP12.31□□□□□ -0.44
SOX2-OT-213ENST00000492337 TSHZ3Q63HK5 1081 aa12.31□□□□□ -0.44
SOX2-OT-213ENST00000492337 NGDNQ8NEJ9 315 aaKnown RBP12.31□□□□□ -0.44
SOX2-OT-213ENST00000492337 EID1Q9Y6B2 187 aa12.31□□□□□ -0.44
SOX2-OT-213ENST00000492337 TAF7Q15545 349 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-213ENST00000492337 ANP32BQ92688 251 aaKnown RBP12.31□□□□□ -0.44
SOX2-OT-213ENST00000492337 RBSNQ9H1K0 784 aa12.31□□□□□ -0.44
SOX2-OT-213ENST00000492337 LRRFIP2Q9Y608 721 aaKnown RBP12.31□□□□□ -0.44
SOX2-OT-213ENST00000492337 POLA2Q14181 598 aa12.3□□□□□ -0.44
SOX2-OT-213ENST00000492337 CEMIPQ8WUJ3 1361 aa12.3□□□□□ -0.44
SOX2-OT-213ENST00000492337 MBD3O95983 291 aa12.3□□□□□ -0.44
SOX2-OT-213ENST00000492337 PRIM1P49642 420 aaKnown RBP12.3□□□□□ -0.44
SOX2-OT-213ENST00000492337 LRSAM1Q6UWE0 723 aa12.3□□□□□ -0.44
SOX2-OT-213ENST00000492337 RAB11FIP3O75154 756 aa12.29□□□□□ -0.44
SOX2-OT-213ENST00000492337 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
SOX2-OT-213ENST00000492337 TMEM63CQ9P1W3 806 aa12.29□□□□□ -0.44
SOX2-OT-213ENST00000492337 CRYBG1Q9Y4K1 1723 aa12.29□□□□□ -0.44
SOX2-OT-213ENST00000492337 KCNA4P22459 653 aa12.29□□□□□ -0.44
SOX2-OT-213ENST00000492337 UNC5CLQ8IV45 518 aa12.29□□□□□ -0.44
SOX2-OT-213ENST00000492337 UBE2Q2Q8WVN8 375 aa12.29□□□□□ -0.44
SOX2-OT-213ENST00000492337 NCLP19338 710 aaKnown RBP12.28□□□□□ -0.44
SOX2-OT-213ENST00000492337 HSPA4P34932 840 aa12.28□□□□□ -0.44
SOX2-OT-213ENST00000492337 NLRP6P59044 892 aa12.28□□□□□ -0.44
SOX2-OT-213ENST00000492337 ANO2Q9NQ90 1003 aa12.28□□□□□ -0.44
SOX2-OT-213ENST00000492337 RBM27Q9P2N5 1060 aaKnown RBP12.28□□□□□ -0.44
SOX2-OT-213ENST00000492337 UBTFL1P0CB47 393 aaPredicted RBP12.28□□□□□ -0.44
SOX2-OT-213ENST00000492337 NSFL1CQ9UNZ2 370 aaKnown RBP12.28□□□□□ -0.44
SOX2-OT-213ENST00000492337 HOXB7P09629 217 aa12.27□□□□□ -0.45
SOX2-OT-213ENST00000492337 PI4K2BQ8TCG2 481 aa12.27□□□□□ -0.45
SOX2-OT-213ENST00000492337 KDM3BQ7LBC6 1761 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms