RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 PDGFDQ9GZP0 370 aaPredicted RBP23.66■■□□□ 1.38
LMNB1-206ENST00000492190 STK32BQ9NY57 414 aa23.66■■□□□ 1.38
LMNB1-206ENST00000492190 NFATC2IPQ8NCF5 419 aa23.65■■□□□ 1.38
LMNB1-206ENST00000492190 GAS2L2Q8NHY3 880 aa23.65■■□□□ 1.38
LMNB1-206ENST00000492190 AKT1S1Q96B36 256 aa23.65■■□□□ 1.38
LMNB1-206ENST00000492190 MAP3K5Q99683 1374 aa23.65■■□□□ 1.38
LMNB1-206ENST00000492190 LRP5O75197 1615 aa23.64■■□□□ 1.38
LMNB1-206ENST00000492190 ZNF831Q5JPB2 1677 aa23.64■■□□□ 1.37
LMNB1-206ENST00000492190 C4BP0C0L5 1744 aa23.62■■□□□ 1.37
LMNB1-206ENST00000492190 IL17REQ8NFR9 667 aa23.62■■□□□ 1.37
LMNB1-206ENST00000492190 PLEKHF1Q96S99 279 aa23.62■■□□□ 1.37
LMNB1-206ENST00000492190 SLC52A2Q9HAB3 445 aa23.62■■□□□ 1.37
LMNB1-206ENST00000492190 UBR3Q6ZT12 1888 aa23.62■■□□□ 1.37
LMNB1-206ENST00000492190 LOC102724428A0A0B4J2F2 783 aa23.61■■□□□ 1.37
LMNB1-206ENST00000492190 GNAT3A8MTJ3 354 aa23.61■■□□□ 1.37
LMNB1-206ENST00000492190 SIK1P57059 783 aa23.61■■□□□ 1.37
LMNB1-206ENST00000492190 SLC4A9Q96Q91 983 aa23.61■■□□□ 1.37
LMNB1-206ENST00000492190 COL5A3P25940 1745 aaPredicted RBP23.61■■□□□ 1.37
LMNB1-206ENST00000492190 MYH14Q7Z406 1995 aaKnown RBP23.6■■□□□ 1.37
LMNB1-206ENST00000492190 UBR2Q8IWV8 1755 aa23.6■■□□□ 1.37
LMNB1-206ENST00000492190 ITPK1Q13572 414 aa23.59■■□□□ 1.37
LMNB1-206ENST00000492190 TJP1Q07157 1748 aa23.59■■□□□ 1.37
LMNB1-206ENST00000492190 CEMIPQ8WUJ3 1361 aa23.57■■□□□ 1.36
LMNB1-206ENST00000492190 LINC00116Q8NCU8 138 aa23.57■■□□□ 1.36
LMNB1-206ENST00000492190 CICQ96RK0 1608 aaPredicted RBP23.56■■□□□ 1.36
LMNB1-206ENST00000492190 CCDC184Q52MB2 194 aa23.56■■□□□ 1.36
LMNB1-206ENST00000492190 PNPLA7Q6ZV29 1317 aa23.56■■□□□ 1.36
LMNB1-206ENST00000492190 ATP6V1AP38606 617 aa23.55■■□□□ 1.36
LMNB1-206ENST00000492190 SLC39A6Q13433 755 aa23.55■■□□□ 1.36
LMNB1-206ENST00000492190 RBM42Q9BTD8 480 aaKnown RBP23.55■■□□□ 1.36
LMNB1-206ENST00000492190 KCPQ6ZWJ8 1503 aa23.54■■□□□ 1.36
LMNB1-206ENST00000492190 PTCD1O75127 700 aaKnown RBP23.53■■□□□ 1.36
LMNB1-206ENST00000492190 MCM10Q7L590 875 aa23.53■■□□□ 1.36
LMNB1-206ENST00000492190 AMIGO3Q86WK7 504 aa23.53■■□□□ 1.36
LMNB1-206ENST00000492190 TFCP2L1Q9NZI6 479 aa23.53■■□□□ 1.36
LMNB1-206ENST00000492190 COL24A1Q17RW2 1714 aa23.53■■□□□ 1.36
LMNB1-206ENST00000492190 DCTN1Q14203 1278 aa23.52■■□□□ 1.36
LMNB1-206ENST00000492190 ZBTB7AO95365 584 aa23.51■■□□□ 1.35
LMNB1-206ENST00000492190 NFE2L2Q16236 605 aa23.51■■□□□ 1.35
LMNB1-206ENST00000492190 ADAMTS8Q9UP79 889 aa23.51■■□□□ 1.35
LMNB1-206ENST00000492190 TEFQ10587 303 aa23.5■■□□□ 1.35
LMNB1-206ENST00000492190 SMIM5Q71RC9 77 aa23.5■■□□□ 1.35
LMNB1-206ENST00000492190 CCDC146Q8IYE0 955 aa23.49■■□□□ 1.35
LMNB1-206ENST00000492190 PNNQ9H307 717 aaKnown RBP23.49■■□□□ 1.35
LMNB1-206ENST00000492190 MAPK8IP3Q9UPT6 1336 aa23.49■■□□□ 1.35
LMNB1-206ENST00000492190 ANP32CO43423 234 aa23.48■■□□□ 1.35
LMNB1-206ENST00000492190 HTATSF1O43719 755 aaKnown RBP23.48■■□□□ 1.35
LMNB1-206ENST00000492190 NEFMP07197 916 aa23.48■■□□□ 1.35
LMNB1-206ENST00000492190 WDR43Q15061 677 aaKnown RBP eCLIP23.48■■□□□ 1.356e-11■■■□□ 18.3
LMNB1-206ENST00000492190 COL23A1Q86Y22 540 aaPredicted RBP23.48■■□□□ 1.35
LMNB1-206ENST00000492190 ATF5Q9Y2D1 282 aaPredicted RBP23.48■■□□□ 1.35
LMNB1-206ENST00000492190 RTF1Q92541 710 aaKnown RBP23.47■■□□□ 1.35
LMNB1-206ENST00000492190 SPON1Q9HCB6 807 aa23.47■■□□□ 1.35
LMNB1-206ENST00000492190 KCNQ3O43525 872 aa23.46■■□□□ 1.35
LMNB1-206ENST00000492190 AK7Q96M32 723 aa23.46■■□□□ 1.35
LMNB1-206ENST00000492190 KDM3BQ7LBC6 1761 aa23.45■■□□□ 1.34
LMNB1-206ENST00000492190 PTGER2P43116 358 aa23.45■■□□□ 1.34
LMNB1-206ENST00000492190 HMGB2P26583 209 aaKnown RBP23.44■■□□□ 1.34
LMNB1-206ENST00000492190 ZNF790Q6PG37 636 aa23.44■■□□□ 1.34
LMNB1-206ENST00000492190 DNAJC10Q8IXB1 793 aa23.44■■□□□ 1.34
LMNB1-206ENST00000492190 SGIP1Q9BQI5 828 aa23.44■■□□□ 1.34
LMNB1-206ENST00000492190 THUMPD2Q9BTF0 503 aaKnown RBP23.44■■□□□ 1.34
LMNB1-206ENST00000492190 MTFR1LQ9H019 292 aa23.44■■□□□ 1.34
LMNB1-206ENST00000492190 CNTNAP4Q9C0A0 1308 aa23.43■■□□□ 1.34
LMNB1-206ENST00000492190 C4AP0C0L4 1744 aa23.43■■□□□ 1.34
LMNB1-206ENST00000492190 TMPOP42166 694 aaKnown RBP23.43■■□□□ 1.34
LMNB1-206ENST00000492190 RUNDC1Q96C34 613 aa23.43■■□□□ 1.34
LMNB1-206ENST00000492190 ZNF496Q96IT1 587 aaPredicted RBP23.43■■□□□ 1.34
LMNB1-206ENST00000492190 BTBD11A6QL63 1104 aa23.42■■□□□ 1.34
LMNB1-206ENST00000492190 GNPATO15228 680 aa23.42■■□□□ 1.34
LMNB1-206ENST00000492190 RC3H1Q5TC82 1133 aaKnown RBP23.42■■□□□ 1.34
LMNB1-206ENST00000492190 RRP7AQ9Y3A4 280 aaKnown RBP23.42■■□□□ 1.34
LMNB1-206ENST00000492190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.41■■□□□ 1.34
LMNB1-206ENST00000492190 PHF14O94880 888 aa23.41■■□□□ 1.34
LMNB1-206ENST00000492190 RIPK4P57078 832 aa23.41■■□□□ 1.34
LMNB1-206ENST00000492190 SLC16A10Q8TF71 515 aa23.41■■□□□ 1.34
LMNB1-206ENST00000492190 MSH5O43196 834 aa23.4■■□□□ 1.34
LMNB1-206ENST00000492190 SSFA2P28290 1259 aa23.4■■□□□ 1.34
LMNB1-206ENST00000492190 CRKLP46109 303 aaKnown RBP23.4■■□□□ 1.34
LMNB1-206ENST00000492190 TTC5Q8N0Z6 440 aa23.4■■□□□ 1.34
LMNB1-206ENST00000492190 INTS5Q6P9B9 1019 aaKnown RBP23.39■■□□□ 1.33
LMNB1-206ENST00000492190 VSIG10Q8N0Z9 540 aa23.39■■□□□ 1.33
LMNB1-206ENST00000492190 FLAD1Q8NFF5 587 aa23.39■■□□□ 1.33
LMNB1-206ENST00000492190 MIS18AQ9NYP9 233 aa23.39■■□□□ 1.33
LMNB1-206ENST00000492190 HEG1Q9ULI3 1381 aa23.39■■□□□ 1.33
LMNB1-206ENST00000492190 CYP19A1P11511 503 aaPredicted RBP23.38■■□□□ 1.33
LMNB1-206ENST00000492190 TAF7Q15545 349 aaPredicted RBP23.38■■□□□ 1.33
LMNB1-206ENST00000492190 PNISRQ8TF01 805 aaKnown RBP23.38■■□□□ 1.33
LMNB1-206ENST00000492190 MRS2Q9HD23 443 aa23.38■■□□□ 1.33
LMNB1-206ENST00000492190 RPS6KA4O75676 772 aa23.37■■□□□ 1.33
LMNB1-206ENST00000492190 NEUROD2Q15784 382 aa23.37■■□□□ 1.33
LMNB1-206ENST00000492190 TRIM35Q9UPQ4 493 aa23.36■■□□□ 1.33
LMNB1-206ENST00000492190 RTCBQ9Y3I0 505 aaKnown RBP23.36■■□□□ 1.33
LMNB1-206ENST00000492190 MSL1Q68DK7 614 aa23.35■■□□□ 1.33
LMNB1-206ENST00000492190 FMNL2Q96PY5 1086 aa23.35■■□□□ 1.33
LMNB1-206ENST00000492190 CCDC87Q9NVE4 849 aa23.35■■□□□ 1.33
LMNB1-206ENST00000492190 PRAMEF22A3QJZ6 481 aa23.33■■□□□ 1.33
LMNB1-206ENST00000492190 APAF1O14727 1248 aa23.33■■□□□ 1.33
LMNB1-206ENST00000492190 ARHGEF1Q92888 912 aaKnown RBP23.33■■□□□ 1.33
LMNB1-206ENST00000492190 ZBTB1Q9Y2K1 713 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms