RNA–Protein interactions for RNA: ENST00000492180.1

TBC1D1-213, Transcript of TBC1 domain family member 1, humanhuman

TSL 2

Gene TBC1D1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-213ENST00000492180 VSIG10Q8N0Z9 540 aa12.47□□□□□ -0.41
TBC1D1-213ENST00000492180 POLKQ9UBT6 870 aa12.47□□□□□ -0.41
TBC1D1-213ENST00000492180 ZNF335Q9H4Z2 1342 aaPredicted RBP12.46□□□□□ -0.41
TBC1D1-213ENST00000492180 PPP1R3GB7ZBB8 358 aa12.46□□□□□ -0.41
TBC1D1-213ENST00000492180 TNNT2P45379 298 aaPredicted RBP12.46□□□□□ -0.41
TBC1D1-213ENST00000492180 PSME1Q06323 249 aa12.46□□□□□ -0.41
TBC1D1-213ENST00000492180 COL3A1P02461 1466 aaPredicted RBP12.46□□□□□ -0.42
TBC1D1-213ENST00000492180 CDK12Q9NYV4 1490 aaPredicted RBP12.46□□□□□ -0.42
TBC1D1-213ENST00000492180 SHPRHQ149N8 1683 aa12.45□□□□□ -0.42
TBC1D1-213ENST00000492180 PRIM1P49642 420 aaKnown RBP12.45□□□□□ -0.42
TBC1D1-213ENST00000492180 PDE3BQ13370 1112 aa12.45□□□□□ -0.42
TBC1D1-213ENST00000492180 PNNQ9H307 717 aaKnown RBP12.45□□□□□ -0.42
TBC1D1-213ENST00000492180 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
TBC1D1-213ENST00000492180 OSBPP22059 807 aa12.44□□□□□ -0.42
TBC1D1-213ENST00000492180 RNF166Q96A37 237 aaPredicted RBP12.44□□□□□ -0.42
TBC1D1-213ENST00000492180 ORAI2Q96SN7 254 aa12.44□□□□□ -0.42
TBC1D1-213ENST00000492180 MAP3K7O43318 606 aa12.43□□□□□ -0.42
TBC1D1-213ENST00000492180 DIAPH1O60610 1272 aaKnown RBP12.43□□□□□ -0.42
TBC1D1-213ENST00000492180 ABTB2Q8N961 1025 aa12.43□□□□□ -0.42
TBC1D1-213ENST00000492180 SBNO1A3KN83 1393 aa12.43□□□□□ -0.42
TBC1D1-213ENST00000492180 NPHP3Q7Z494 1330 aa12.42□□□□□ -0.42
TBC1D1-213ENST00000492180 TSR1Q2NL82 804 aaKnown RBP12.42□□□□□ -0.42
TBC1D1-213ENST00000492180 KCNH5Q8NCM2 988 aa12.42□□□□□ -0.42
TBC1D1-213ENST00000492180 TRPM3Q9HCF6 1732 aaPredicted RBP12.42□□□□□ -0.42
TBC1D1-213ENST00000492180 FOXO3O43524 673 aa12.41□□□□□ -0.42
TBC1D1-213ENST00000492180 FCHSD2O94868 740 aa12.41□□□□□ -0.42
TBC1D1-213ENST00000492180 MLLT3P42568 568 aaPredicted RBP12.41□□□□□ -0.42
TBC1D1-213ENST00000492180 KRT28Q7Z3Y7 464 aa12.41□□□□□ -0.42
TBC1D1-213ENST00000492180 RUNDC1Q96C34 613 aa12.41□□□□□ -0.42
TBC1D1-213ENST00000492180 SLAIN2Q9P270 581 aa12.41□□□□□ -0.42
TBC1D1-213ENST00000492180 MARF1Q9Y4F3 1742 aaKnown RBP12.41□□□□□ -0.42
TBC1D1-213ENST00000492180 BHMG1C9JSJ3 638 aaPredicted RBP12.4□□□□□ -0.42
TBC1D1-213ENST00000492180 IL13P35225 146 aa12.39□□□□□ -0.43
TBC1D1-213ENST00000492180 PROX2Q3B8N5 592 aa12.39□□□□□ -0.43
TBC1D1-213ENST00000492180 EMILIN1Q9Y6C2 1016 aa12.39□□□□□ -0.43
TBC1D1-213ENST00000492180 LTBP4Q8N2S1 1624 aa12.39□□□□□ -0.43
TBC1D1-213ENST00000492180 ALS2Q96Q42 1657 aa12.38□□□□□ -0.43
TBC1D1-213ENST00000492180 USP19O94966 1318 aa12.38□□□□□ -0.43
TBC1D1-213ENST00000492180 PHRF1Q9P1Y6 1649 aaKnown RBP12.38□□□□□ -0.43
TBC1D1-213ENST00000492180 U2AF1L5P0DN76 240 aaPredicted RBP12.38□□□□□ -0.43
TBC1D1-213ENST00000492180 U2AF1Q01081 240 aaKnown RBP eCLIP12.38□□□□□ -0.43
TBC1D1-213ENST00000492180 CCDC27Q2M243 656 aa12.38□□□□□ -0.43
TBC1D1-213ENST00000492180 RTL1A6NKG5 1358 aa12.38□□□□□ -0.43
TBC1D1-213ENST00000492180 FLT4P35916 1363 aa12.38□□□□□ -0.43
TBC1D1-213ENST00000492180 SLIT3O75094 1523 aa12.37□□□□□ -0.43
TBC1D1-213ENST00000492180 SEMA3EO15041 775 aa12.37□□□□□ -0.43
TBC1D1-213ENST00000492180 BRINP3Q76B58 766 aa12.37□□□□□ -0.43
TBC1D1-213ENST00000492180 MAP3K19Q56UN5 1328 aa12.37□□□□□ -0.43
TBC1D1-213ENST00000492180 ZNF521Q96K83 1311 aa12.37□□□□□ -0.43
TBC1D1-213ENST00000492180 PXDNQ92626 1479 aa12.36□□□□□ -0.43
TBC1D1-213ENST00000492180 ARHGEF10O15013 1369 aa12.36□□□□□ -0.43
TBC1D1-213ENST00000492180 RRS1Q15050 365 aaKnown RBP12.36□□□□□ -0.43
TBC1D1-213ENST00000492180 PLEKHF1Q96S99 279 aa12.36□□□□□ -0.43
TBC1D1-213ENST00000492180 SOS2Q07890 1332 aaPredicted RBP12.36□□□□□ -0.43
TBC1D1-213ENST00000492180 APAF1O14727 1248 aa12.35□□□□□ -0.43
TBC1D1-213ENST00000492180 PPM1GO15355 546 aaPredicted RBP12.35□□□□□ -0.43
TBC1D1-213ENST00000492180 FBLN1P23142 703 aa12.35□□□□□ -0.43
TBC1D1-213ENST00000492180 NFAT5O94916 1531 aa12.35□□□□□ -0.43
TBC1D1-213ENST00000492180 SPATA31A3Q5VYP0 1347 aa12.35□□□□□ -0.43
TBC1D1-213ENST00000492180 IQSEC2Q5JU85 1478 aa12.34□□□□□ -0.43
TBC1D1-213ENST00000492180 PEAK1Q9H792 1746 aa12.34□□□□□ -0.43
TBC1D1-213ENST00000492180 U2SURPO15042 1029 aaKnown RBP12.34□□□□□ -0.43
TBC1D1-213ENST00000492180 ONECUT3O60422 494 aaPredicted RBP12.34□□□□□ -0.43
TBC1D1-213ENST00000492180 GCP02774 474 aa12.34□□□□□ -0.43
TBC1D1-213ENST00000492180 NEFMP07197 916 aa12.34□□□□□ -0.43
TBC1D1-213ENST00000492180 AMPHP49418 695 aa12.34□□□□□ -0.43
TBC1D1-213ENST00000492180 TCP11L2Q8N4U5 519 aa12.34□□□□□ -0.43
TBC1D1-213ENST00000492180 IP6K1Q92551 441 aa12.34□□□□□ -0.43
TBC1D1-213ENST00000492180 RABGEF1Q9UJ41 708 aa12.34□□□□□ -0.43
TBC1D1-213ENST00000492180 TNS3Q68CZ2 1445 aa12.34□□□□□ -0.43
TBC1D1-213ENST00000492180 EIF4A2Q14240 407 aaKnown RBP12.33□□□□□ -0.44
TBC1D1-213ENST00000492180 ARHGEF25Q86VW2 580 aa12.33□□□□□ -0.44
TBC1D1-213ENST00000492180 WDR63Q8IWG1 891 aa12.33□□□□□ -0.44
TBC1D1-213ENST00000492180 RSPH6AQ9H0K4 717 aa12.33□□□□□ -0.44
TBC1D1-213ENST00000492180 CDHR5Q9HBB8 845 aa12.33□□□□□ -0.44
TBC1D1-213ENST00000492180 MED1Q15648 1581 aaPredicted RBP12.33□□□□□ -0.44
TBC1D1-213ENST00000492180 RGPD1P0DJD0 1748 aa12.33□□□□□ -0.44
TBC1D1-213ENST00000492180 ABCC6O95255 1503 aa12.32□□□□□ -0.44
TBC1D1-213ENST00000492180 TRIM6-TRIM34B2RNG4 842 aa12.32□□□□□ -0.44
TBC1D1-213ENST00000492180 HOXC9P31274 260 aa12.32□□□□□ -0.44
TBC1D1-213ENST00000492180 HSP90AB2PQ58FF8 381 aa12.32□□□□□ -0.44
TBC1D1-213ENST00000492180 CCDC146Q8IYE0 955 aa12.32□□□□□ -0.44
TBC1D1-213ENST00000492180 LTN1O94822 1766 aa12.32□□□□□ -0.44
TBC1D1-213ENST00000492180 NHSL1Q5SYE7 1610 aa12.32□□□□□ -0.44
TBC1D1-213ENST00000492180 MAPK8IP3Q9UPT6 1336 aa12.32□□□□□ -0.44
TBC1D1-213ENST00000492180 WWC1Q8IX03 1113 aa12.31□□□□□ -0.44
TBC1D1-213ENST00000492180 TRMT2AQ8IZ69 625 aaKnown RBP12.31□□□□□ -0.44
TBC1D1-213ENST00000492180 CERKQ8TCT0 537 aa12.31□□□□□ -0.44
TBC1D1-213ENST00000492180 KIAA1468Q9P260 1216 aa12.31□□□□□ -0.44
TBC1D1-213ENST00000492180 KDRP35968 1356 aa12.3□□□□□ -0.44
TBC1D1-213ENST00000492180 TMPOP42166 694 aaKnown RBP12.3□□□□□ -0.44
TBC1D1-213ENST00000492180 NUTM2GQ5VZR2 741 aa12.3□□□□□ -0.44
TBC1D1-213ENST00000492180 MRPL50Q8N5N7 158 aaKnown RBP12.3□□□□□ -0.44
TBC1D1-213ENST00000492180 NBPF3Q9H094 633 aa12.3□□□□□ -0.44
TBC1D1-213ENST00000492180 IGSF1Q8N6C5 1336 aa12.3□□□□□ -0.44
TBC1D1-213ENST00000492180 TESPA1A2RU30 521 aaPredicted RBP12.29□□□□□ -0.44
TBC1D1-213ENST00000492180 E9PSI1 815 aa12.29□□□□□ -0.44
TBC1D1-213ENST00000492180 XPCQ01831 940 aaPredicted RBP12.29□□□□□ -0.44
TBC1D1-213ENST00000492180 SLFN5Q08AF3 891 aa12.29□□□□□ -0.44
TBC1D1-213ENST00000492180 IL16Q14005 1332 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms