RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	TNS2	Q63HR2	1409 aa		12.73	□□□□□ -0.37
TRO-223	ENST00000492142	CALD1	Q05682	793 aa	Known RBP	12.72	□□□□□ -0.37
TRO-223	ENST00000492142	NKX1-1	Q15270	411 aa	Predicted RBP	12.72	□□□□□ -0.37
TRO-223	ENST00000492142	MIS18A	Q9NYP9	233 aa		12.72	□□□□□ -0.37
TRO-223	ENST00000492142	SHANK3	Q9BYB0	1731 aa		12.71	□□□□□ -0.37
TRO-223	ENST00000492142	THSD7A	Q9UPZ6	1657 aa		12.71	□□□□□ -0.37
TRO-223	ENST00000492142	LRRC37A3	O60309	1634 aa		12.71	□□□□□ -0.37
TRO-223	ENST00000492142	CABP4	P57796	275 aa		12.71	□□□□□ -0.37
TRO-223	ENST00000492142	TEF	Q10587	303 aa		12.71	□□□□□ -0.37
TRO-223	ENST00000492142	FAM182B	Q5T319	152 aa		12.71	□□□□□ -0.37
TRO-223	ENST00000492142	KDM6A	O15550	1401 aa	Predicted RBP	12.71	□□□□□ -0.38
TRO-223	ENST00000492142	SLFN5	Q08AF3	891 aa		12.7	□□□□□ -0.38
TRO-223	ENST00000492142	TAF7	Q15545	349 aa	Predicted RBP	12.7	□□□□□ -0.38
TRO-223	ENST00000492142	NFATC2IP	Q8NCF5	419 aa		12.7	□□□□□ -0.38
TRO-223	ENST00000492142	CEMIP	Q8WUJ3	1361 aa		12.69	□□□□□ -0.38
TRO-223	ENST00000492142	IL16	Q14005	1332 aa		12.69	□□□□□ -0.38
TRO-223	ENST00000492142	ERVV-2	B6SEH9	535 aa		12.69	□□□□□ -0.38
TRO-223	ENST00000492142		E9PSI1	815 aa		12.69	□□□□□ -0.38
TRO-223	ENST00000492142	GNAI1	P63096	354 aa		12.69	□□□□□ -0.38
TRO-223	ENST00000492142	KRT27	Q7Z3Y8	459 aa		12.69	□□□□□ -0.38
TRO-223	ENST00000492142	TSR2	Q969E8	191 aa	Known RBP	12.69	□□□□□ -0.38
TRO-223	ENST00000492142	ACSBG1	Q96GR2	724 aa		12.69	□□□□□ -0.38
TRO-223	ENST00000492142	SLC52A2	Q9HAB3	445 aa		12.69	□□□□□ -0.38
TRO-223	ENST00000492142	IFT57	Q9NWB7	429 aa		12.69	□□□□□ -0.38
TRO-223	ENST00000492142	VIRMA	Q69YN4	1812 aa	Known RBP	12.68	□□□□□ -0.38
TRO-223	ENST00000492142	CHL1	O00533	1208 aa		12.68	□□□□□ -0.38
TRO-223	ENST00000492142	ZNF853	P0CG23	659 aa		12.68	□□□□□ -0.38
TRO-223	ENST00000492142	PRIM1	P49642	420 aa	Known RBP	12.68	□□□□□ -0.38
TRO-223	ENST00000492142	SYTL4	Q96C24	671 aa	Predicted RBP	12.68	□□□□□ -0.38
TRO-223	ENST00000492142	CFAP44	Q96MT7	982 aa		12.68	□□□□□ -0.38
TRO-223	ENST00000492142	MYH16	Q9H6N6	1097 aa		12.68	□□□□□ -0.38
TRO-223	ENST00000492142	TSPYL4	Q9UJ04	414 aa		12.68	□□□□□ -0.38
TRO-223	ENST00000492142	SCN11A	Q9UI33	1791 aa		12.68	□□□□□ -0.38
TRO-223	ENST00000492142	BTBD11	A6QL63	1104 aa		12.67	□□□□□ -0.38
TRO-223	ENST00000492142	MBIP	Q9NS73	344 aa		12.67	□□□□□ -0.38
TRO-223	ENST00000492142	TMOD3	Q9NYL9	352 aa		12.67	□□□□□ -0.38
TRO-223	ENST00000492142	BRWD3	Q6RI45	1802 aa		12.67	□□□□□ -0.38
TRO-223	ENST00000492142	KCNQ3	O43525	872 aa		12.66	□□□□□ -0.38
TRO-223	ENST00000492142	DUSP27	Q5VZP5	1158 aa		12.66	□□□□□ -0.38
TRO-223	ENST00000492142	TRMT2A	Q8IZ69	625 aa	Known RBP	12.66	□□□□□ -0.38
TRO-223	ENST00000492142	PIGB	Q92521	554 aa		12.66	□□□□□ -0.38
TRO-223	ENST00000492142	FANCI	Q9NVI1	1328 aa		12.65	□□□□□ -0.38
TRO-223	ENST00000492142	RGS12	O14924	1447 aa		12.65	□□□□□ -0.38
TRO-223	ENST00000492142	KCNQ2	O43526	872 aa		12.65	□□□□□ -0.38
TRO-223	ENST00000492142	SLC39A6	Q13433	755 aa		12.65	□□□□□ -0.38
TRO-223	ENST00000492142	ADAMTS7	Q9UKP4	1686 aa		12.64	□□□□□ -0.39
TRO-223	ENST00000492142	EXOSC9	Q06265	439 aa	Known RBP	12.64	□□□□□ -0.39
TRO-223	ENST00000492142	FAM196A	Q6ZSG2	479 aa		12.64	□□□□□ -0.39
TRO-223	ENST00000492142	BABAM1	Q9NWV8	329 aa		12.64	□□□□□ -0.39
TRO-223	ENST00000492142	TOGARAM1	Q9Y4F4	1720 aa		12.63	□□□□□ -0.39
TRO-223	ENST00000492142	ELL2	O00472	640 aa	Predicted RBP	12.63	□□□□□ -0.39
TRO-223	ENST00000492142	PTF1A	Q7RTS3	328 aa		12.63	□□□□□ -0.39
TRO-223	ENST00000492142	ITGB4	P16144	1822 aa		12.62	□□□□□ -0.39
TRO-223	ENST00000492142	CENPB	P07199	599 aa	Predicted RBP	12.62	□□□□□ -0.39
TRO-223	ENST00000492142	KRT24	Q2M2I5	525 aa		12.62	□□□□□ -0.39
TRO-223	ENST00000492142	ZNF790	Q6PG37	636 aa		12.62	□□□□□ -0.39
TRO-223	ENST00000492142	TTC5	Q8N0Z6	440 aa		12.62	□□□□□ -0.39
TRO-223	ENST00000492142	C8orf58	Q8NAV2	365 aa		12.62	□□□□□ -0.39
TRO-223	ENST00000492142	ASAP1	Q9ULH1	1129 aa		12.62	□□□□□ -0.39
TRO-223	ENST00000492142	DOT1L	Q8TEK3	1739 aa		12.62	□□□□□ -0.39
TRO-223	ENST00000492142	SIPA1L3	O60292	1781 aa	Predicted RBP	12.61	□□□□□ -0.39
TRO-223	ENST00000492142	MRC1	P22897	1456 aa		12.61	□□□□□ -0.39
TRO-223	ENST00000492142	EIF4A1	P60842	406 aa	Known RBP	12.61	□□□□□ -0.39
TRO-223	ENST00000492142	ATG3	Q9NT62	314 aa		12.61	□□□□□ -0.39
TRO-223	ENST00000492142	BCL9	O00512	1426 aa		12.61	□□□□□ -0.39
TRO-223	ENST00000492142	PTCD1	O75127	700 aa	Known RBP	12.6	□□□□□ -0.39
TRO-223	ENST00000492142	TRIM37	O94972	964 aa		12.6	□□□□□ -0.39
TRO-223	ENST00000492142	TSPYL6	Q8N831	410 aa		12.6	□□□□□ -0.39
TRO-223	ENST00000492142	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.6	□□□□□ -0.39
TRO-223	ENST00000492142	ZNF496	Q96IT1	587 aa	Predicted RBP	12.59	□□□□□ -0.39
TRO-223	ENST00000492142	RBM42	Q9BTD8	480 aa	Known RBP	12.59	□□□□□ -0.39
TRO-223	ENST00000492142	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.59	□□□□□ -0.39
TRO-223	ENST00000492142	VAMP4	O75379	141 aa		12.58	□□□□□ -0.4
TRO-223	ENST00000492142	TWISTNB	Q3B726	338 aa	Predicted RBP	12.58	□□□□□ -0.4
TRO-223	ENST00000492142	FMNL2	Q96PY5	1086 aa		12.58	□□□□□ -0.4
TRO-223	ENST00000492142	KDM3B	Q7LBC6	1761 aa		12.58	□□□□□ -0.4
TRO-223	ENST00000492142	SBF2	Q86WG5	1849 aa		12.58	□□□□□ -0.4
TRO-223	ENST00000492142	NECTIN2	Q92692	538 aa		12.57	□□□□□ -0.4
TRO-223	ENST00000492142	SMARCC1	Q92922	1105 aa	Predicted RBP	12.57	□□□□□ -0.4
TRO-223	ENST00000492142	PRAMEF22	A3QJZ6	481 aa		12.56	□□□□□ -0.4
TRO-223	ENST00000492142	TCERG1	O14776	1098 aa	Known RBP	12.56	□□□□□ -0.4
TRO-223	ENST00000492142	GIGYF1	O75420	1035 aa	Predicted RBP	12.56	□□□□□ -0.4
TRO-223	ENST00000492142	SNRPA1	P09661	255 aa	Known RBP	12.56	□□□□□ -0.4
TRO-223	ENST00000492142	EIF2S2	P20042	333 aa	Known RBP	12.56	□□□□□ -0.4
TRO-223	ENST00000492142	NHS	Q6T4R5	1651 aa		12.55	□□□□□ -0.4
TRO-223	ENST00000492142	RCAN3	Q9UKA8	241 aa		12.55	□□□□□ -0.4
TRO-223	ENST00000492142	PALLD	Q8WX93	1383 aa		12.55	□□□□□ -0.4
TRO-223	ENST00000492142	HEG1	Q9ULI3	1381 aa		12.55	□□□□□ -0.4
TRO-223	ENST00000492142	BTAF1	O14981	1849 aa		12.54	□□□□□ -0.4
TRO-223	ENST00000492142	APBA3	O96018	575 aa		12.54	□□□□□ -0.4
TRO-223	ENST00000492142	CT47B1	P0C2W7	299 aa	Predicted RBP	12.54	□□□□□ -0.4
TRO-223	ENST00000492142	SLC4A9	Q96Q91	983 aa		12.54	□□□□□ -0.4
TRO-223	ENST00000492142	USP16	Q9Y5T5	823 aa		12.54	□□□□□ -0.4
TRO-223	ENST00000492142	KCP	Q6ZWJ8	1503 aa		12.53	□□□□□ -0.4
TRO-223	ENST00000492142	PAPPA	Q13219	1627 aa		12.53	□□□□□ -0.4
TRO-223	ENST00000492142	LOC102724428	A0A0B4J2F2	783 aa		12.53	□□□□□ -0.4
TRO-223	ENST00000492142	ATP6V1A	P38606	617 aa		12.53	□□□□□ -0.4
TRO-223	ENST00000492142	RARS	P54136	660 aa	Known RBP	12.53	□□□□□ -0.4
TRO-223	ENST00000492142	KCNQ4	P56696	695 aa		12.53	□□□□□ -0.4
TRO-223	ENST00000492142	SIK1	P57059	783 aa		12.53	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms