RNA–Protein interactions for RNA: ENST00000491919.5

CHEK2-224, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 609 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-224ENST00000491919 CSPP1Q1MSJ5 1256 aa9.16□□□□□ -0.94
CHEK2-224ENST00000491919 PRPF38BQ5VTL8 546 aaKnown RBP9.16□□□□□ -0.94
CHEK2-224ENST00000491919 FBXO31Q5XUX0 539 aaPredicted RBP9.16□□□□□ -0.94
CHEK2-224ENST00000491919 ANKLE2Q86XL3 938 aa9.16□□□□□ -0.94
CHEK2-224ENST00000491919 ITPKCQ96DU7 683 aa9.16□□□□□ -0.94
CHEK2-224ENST00000491919 PURBQ96QR8 312 aaKnown RBP9.16□□□□□ -0.94
CHEK2-224ENST00000491919 DEPDC5O75140 1603 aa9.16□□□□□ -0.94
CHEK2-224ENST00000491919 NPAS3Q8IXF0 933 aa9.15□□□□□ -0.94
CHEK2-224ENST00000491919 ZC3H13Q5T200 1668 aaKnown RBP9.15□□□□□ -0.94
CHEK2-224ENST00000491919 LILRB3O75022 631 aa9.14□□□□□ -0.95
CHEK2-224ENST00000491919 RXRBP28702 533 aa9.14□□□□□ -0.95
CHEK2-224ENST00000491919 GGT6Q6P531 493 aa9.14□□□□□ -0.95
CHEK2-224ENST00000491919 SH3RF1Q7Z6J0 888 aa9.14□□□□□ -0.95
CHEK2-224ENST00000491919 AK7Q96M32 723 aa9.14□□□□□ -0.95
CHEK2-224ENST00000491919 C1QTNF2Q9BXJ5 285 aa9.14□□□□□ -0.95
CHEK2-224ENST00000491919 PLEKHG3A1L390 1219 aa9.13□□□□□ -0.95
CHEK2-224ENST00000491919 RTL5Q5HYW3 569 aaPredicted RBP9.13□□□□□ -0.95
CHEK2-224ENST00000491919 MEX3CQ5U5Q3 659 aaKnown RBP9.13□□□□□ -0.95
CHEK2-224ENST00000491919 ZNF772Q68DY9 489 aaPredicted RBP9.13□□□□□ -0.95
CHEK2-224ENST00000491919 FAM174AQ8TBP5 190 aa9.13□□□□□ -0.95
CHEK2-224ENST00000491919 TNRQ92752 1358 aa9.12□□□□□ -0.95
CHEK2-224ENST00000491919 JCADQ9P266 1359 aa9.12□□□□□ -0.95
CHEK2-224ENST00000491919 SAMD9LQ8IVG5 1584 aa9.12□□□□□ -0.95
CHEK2-224ENST00000491919 PDE4DQ08499 809 aa9.12□□□□□ -0.95
CHEK2-224ENST00000491919 DIXDC1Q155Q3 683 aa9.12□□□□□ -0.95
CHEK2-224ENST00000491919 COL16A1Q07092 1604 aaPredicted RBP9.12□□□□□ -0.95
CHEK2-224ENST00000491919 PLXNC1O60486 1568 aa9.12□□□□□ -0.95
CHEK2-224ENST00000491919 CDK12Q9NYV4 1490 aaPredicted RBP9.11□□□□□ -0.95
CHEK2-224ENST00000491919 NUTM2BA6NNL0 878 aaPredicted RBP9.11□□□□□ -0.95
CHEK2-224ENST00000491919 NUTM2EB1AL46 878 aaPredicted RBP9.11□□□□□ -0.95
CHEK2-224ENST00000491919 ZIC2O95409 532 aaPredicted RBP9.11□□□□□ -0.95
CHEK2-224ENST00000491919 TUSC1Q2TAM9 212 aa9.11□□□□□ -0.95
CHEK2-224ENST00000491919 NUTM2DQ5VT03 806 aaPredicted RBP9.11□□□□□ -0.95
CHEK2-224ENST00000491919 NUTM2AQ8IVF1 878 aaPredicted RBP9.11□□□□□ -0.95
CHEK2-224ENST00000491919 SLC16A10Q8TF71 515 aa9.11□□□□□ -0.95
CHEK2-224ENST00000491919 IRF7Q92985 503 aa9.11□□□□□ -0.95
CHEK2-224ENST00000491919 UGGT1Q9NYU2 1555 aa9.11□□□□□ -0.95
CHEK2-224ENST00000491919 VSIG8P0DPA2 414 aa9.1□□□□□ -0.95
CHEK2-224ENST00000491919 ARID5BQ14865 1188 aa9.1□□□□□ -0.95
CHEK2-224ENST00000491919 ATP1B4Q9UN42 357 aaPredicted RBP9.1□□□□□ -0.95
CHEK2-224ENST00000491919 PREX2Q70Z35 1606 aa9.09□□□□□ -0.95
CHEK2-224ENST00000491919 SH3BP5LQ7L8J4 393 aa9.09□□□□□ -0.95
CHEK2-224ENST00000491919 MAP3K1Q13233 1512 aa9.09□□□□□ -0.95
CHEK2-224ENST00000491919 MEIOBQ8N635 442 aa9.08□□□□□ -0.96
CHEK2-224ENST00000491919 ZSCAN1Q8NBB4 408 aa9.08□□□□□ -0.96
CHEK2-224ENST00000491919 SLC24A3Q9HC58 644 aa9.08□□□□□ -0.96
CHEK2-224ENST00000491919 FAM135AQ9P2D6 1515 aa9.08□□□□□ -0.96
CHEK2-224ENST00000491919 TMEM94Q12767 1356 aa9.08□□□□□ -0.96
CHEK2-224ENST00000491919 LRP5O75197 1615 aa9.07□□□□□ -0.96
CHEK2-224ENST00000491919 NR5A1Q13285 461 aa9.07□□□□□ -0.96
CHEK2-224ENST00000491919 A2MP01023 1474 aa9.07□□□□□ -0.96
CHEK2-224ENST00000491919 ATP7AQ04656 1500 aa9.06□□□□□ -0.96
CHEK2-224ENST00000491919 C6orf118Q5T5N4 469 aa9.06□□□□□ -0.96
CHEK2-224ENST00000491919 THEMISQ8N1K5 641 aaPredicted RBP9.06□□□□□ -0.96
CHEK2-224ENST00000491919 TSC1Q92574 1164 aa9.06□□□□□ -0.96
CHEK2-224ENST00000491919 AFF2P51816 1311 aa9.05□□□□□ -0.96
CHEK2-224ENST00000491919 CLIP1P30622 1438 aa9.05□□□□□ -0.96
CHEK2-224ENST00000491919 SYCP2Q9BX26 1530 aa9.05□□□□□ -0.96
CHEK2-224ENST00000491919 INO80Q9ULG1 1556 aaPredicted RBP9.05□□□□□ -0.96
CHEK2-224ENST00000491919 SCARF1Q14162 830 aa9.05□□□□□ -0.96
CHEK2-224ENST00000491919 BPHLQ86WA6 291 aaPredicted RBP9.05□□□□□ -0.96
CHEK2-224ENST00000491919 TRMT44Q8IYL2 757 aaKnown RBP9.05□□□□□ -0.96
CHEK2-224ENST00000491919 DNMT3LQ9UJW3 386 aa9.05□□□□□ -0.96
CHEK2-224ENST00000491919 LRRIQ1Q96JM4 1722 aa9.05□□□□□ -0.96
CHEK2-224ENST00000491919 SHPRHQ149N8 1683 aa9.04□□□□□ -0.96
CHEK2-224ENST00000491919 PZPP20742 1482 aa9.04□□□□□ -0.96
CHEK2-224ENST00000491919 FSHRP23945 695 aa9.04□□□□□ -0.96
CHEK2-224ENST00000491919 LINC00528Q8N1L1 170 aa9.04□□□□□ -0.96
CHEK2-224ENST00000491919 TROQ12816 1431 aaPredicted RBP9.04□□□□□ -0.96
CHEK2-224ENST00000491919 SPAG9O60271 1321 aaKnown RBP9.04□□□□□ -0.96
CHEK2-224ENST00000491919 SOS2Q07890 1332 aaPredicted RBP9.04□□□□□ -0.96
CHEK2-224ENST00000491919 CDC42BPAQ5VT25 1732 aa9.03□□□□□ -0.96
CHEK2-224ENST00000491919 CLK2P49760 499 aaKnown RBP9.03□□□□□ -0.96
CHEK2-224ENST00000491919 OCSTAMPQ9BR26 566 aa9.03□□□□□ -0.96
CHEK2-224ENST00000491919 MAP4K5Q9Y4K4 846 aa9.03□□□□□ -0.96
CHEK2-224ENST00000491919 KDM5DQ9BY66 1539 aa9.03□□□□□ -0.96
CHEK2-224ENST00000491919 SPATA31A6Q5VVP1 1343 aa9.03□□□□□ -0.96
CHEK2-224ENST00000491919 LRRC9Q6ZRR7 1453 aa9.02□□□□□ -0.96
CHEK2-224ENST00000491919 ATAD2Q6PL18 1390 aa9.02□□□□□ -0.97
CHEK2-224ENST00000491919 PPFIA3O75145 1194 aa9.02□□□□□ -0.97
CHEK2-224ENST00000491919 CTDSPL2Q05D32 466 aa9.02□□□□□ -0.97
CHEK2-224ENST00000491919 AGERQ15109 404 aa9.02□□□□□ -0.97
CHEK2-224ENST00000491919 CDK11AQ9UQ88 783 aaPredicted RBP9.02□□□□□ -0.97
CHEK2-224ENST00000491919 MIA2Q96PC5 1412 aa9.02□□□□□ -0.97
CHEK2-224ENST00000491919 NLRP1Q9C000 1473 aa9.02□□□□□ -0.97
CHEK2-224ENST00000491919 YY1P25490 414 aa9.01□□□□□ -0.97
CHEK2-224ENST00000491919 HNRNPMP52272 730 aaKnown RBP eCLIP9.01□□□□□ -0.97
CHEK2-224ENST00000491919 KRT76Q01546 638 aa9.01□□□□□ -0.97
CHEK2-224ENST00000491919 ERFEQ4G0M1 354 aa9.01□□□□□ -0.97
CHEK2-224ENST00000491919 POLR3EQ9NVU0 708 aa9.01□□□□□ -0.97
CHEK2-224ENST00000491919 ZNF777Q9ULD5 760 aaPredicted RBP9.01□□□□□ -0.97
CHEK2-224ENST00000491919 SCAF11Q99590 1463 aaKnown RBP9.01□□□□□ -0.97
CHEK2-224ENST00000491919 ADGBQ8N7X0 1667 aa9□□□□□ -0.97
CHEK2-224ENST00000491919 TIAM1Q13009 1591 aa9□□□□□ -0.97
CHEK2-224ENST00000491919 LTKP29376 864 aa9□□□□□ -0.97
CHEK2-224ENST00000491919 LRRN4Q8WUT4 740 aa9□□□□□ -0.97
CHEK2-224ENST00000491919 UBR1Q8IWV7 1749 aa9□□□□□ -0.97
CHEK2-224ENST00000491919 FGD6Q6ZV73 1430 aa8.99□□□□□ -0.97
CHEK2-224ENST00000491919 EP400Q96L91 3159 aa8.99□□□□□ -0.97
CHEK2-224ENST00000491919 MAGEB6P1A0A0J9YX57 407 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms