RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ERICH6BQ5W0A0 696 aa12.42□□□□□ -0.42
BRCA1-219ENST00000491747 PALLDQ8WX93 1383 aa12.42□□□□□ -0.42
BRCA1-219ENST00000491747 FCHSD2O94868 740 aa12.42□□□□□ -0.42
BRCA1-219ENST00000491747 ATG3Q9NT62 314 aa12.42□□□□□ -0.42
BRCA1-219ENST00000491747 CASZ1Q86V15 1759 aa12.41□□□□□ -0.42
BRCA1-219ENST00000491747 RNMTO43148 476 aaKnown RBP12.41□□□□□ -0.42
BRCA1-219ENST00000491747 ZNF827Q17R98 1081 aa12.41□□□□□ -0.42
BRCA1-219ENST00000491747 SLC27A3Q5K4L6 730 aa12.41□□□□□ -0.42
BRCA1-219ENST00000491747 NFATC2IPQ8NCF5 419 aa12.41□□□□□ -0.42
BRCA1-219ENST00000491747 PDGFDQ9GZP0 370 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-219ENST00000491747 SIPA1L3O60292 1781 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-219ENST00000491747 CABP4P57796 275 aa12.4□□□□□ -0.42
BRCA1-219ENST00000491747 PLEKHF1Q96S99 279 aa12.4□□□□□ -0.42
BRCA1-219ENST00000491747 CCNL1Q9UK58 526 aaPredicted RBP12.4□□□□□ -0.42
BRCA1-219ENST00000491747 MRC1P22897 1456 aa12.4□□□□□ -0.42
BRCA1-219ENST00000491747 SLC15A2Q16348 729 aa12.4□□□□□ -0.43
BRCA1-219ENST00000491747 QSER1Q2KHR3 1735 aa12.39□□□□□ -0.43
BRCA1-219ENST00000491747 IL17REQ8NFR9 667 aa12.39□□□□□ -0.43
BRCA1-219ENST00000491747 GAS2L2Q8NHY3 880 aa12.39□□□□□ -0.43
BRCA1-219ENST00000491747 AKT1S1Q96B36 256 aa12.39□□□□□ -0.43
BRCA1-219ENST00000491747 MAP3K5Q99683 1374 aa12.39□□□□□ -0.43
BRCA1-219ENST00000491747 CCDC184Q52MB2 194 aa12.38□□□□□ -0.43
BRCA1-219ENST00000491747 SMARCC1Q92922 1105 aaPredicted RBP12.38□□□□□ -0.43
BRCA1-219ENST00000491747 STK32BQ9NY57 414 aa12.38□□□□□ -0.43
BRCA1-219ENST00000491747 FANCIQ9NVI1 1328 aa12.38□□□□□ -0.43
BRCA1-219ENST00000491747 GNAT3A8MTJ3 354 aa12.38□□□□□ -0.43
BRCA1-219ENST00000491747 SLC4A9Q96Q91 983 aa12.38□□□□□ -0.43
BRCA1-219ENST00000491747 SLC52A2Q9HAB3 445 aa12.38□□□□□ -0.43
BRCA1-219ENST00000491747 C4BP0C0L5 1744 aa12.38□□□□□ -0.43
BRCA1-219ENST00000491747 ZNF831Q5JPB2 1677 aa12.37□□□□□ -0.43
BRCA1-219ENST00000491747 LOC102724428A0A0B4J2F2 783 aa12.37□□□□□ -0.43
BRCA1-219ENST00000491747 SIK1P57059 783 aa12.37□□□□□ -0.43
BRCA1-219ENST00000491747 COL5A3P25940 1745 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-219ENST00000491747 ITPK1Q13572 414 aa12.36□□□□□ -0.43
BRCA1-219ENST00000491747 TJP1Q07157 1748 aa12.36□□□□□ -0.43
BRCA1-219ENST00000491747 UBR2Q8IWV8 1755 aa12.36□□□□□ -0.43
BRCA1-219ENST00000491747 LRP5O75197 1615 aa12.36□□□□□ -0.43
BRCA1-219ENST00000491747 UBR3Q6ZT12 1888 aa12.35□□□□□ -0.43
BRCA1-219ENST00000491747 SLC39A6Q13433 755 aa12.35□□□□□ -0.43
BRCA1-219ENST00000491747 LINC00116Q8NCU8 138 aa12.35□□□□□ -0.43
BRCA1-219ENST00000491747 CEMIPQ8WUJ3 1361 aa12.35□□□□□ -0.43
BRCA1-219ENST00000491747 DCTN1Q14203 1278 aa12.35□□□□□ -0.43
BRCA1-219ENST00000491747 MCM10Q7L590 875 aa12.35□□□□□ -0.43
BRCA1-219ENST00000491747 RBM42Q9BTD8 480 aaKnown RBP12.35□□□□□ -0.43
BRCA1-219ENST00000491747 ADAMTS8Q9UP79 889 aa12.35□□□□□ -0.43
BRCA1-219ENST00000491747 SRCAPQ6ZRS2 3230 aa12.34□□□□□ -0.43
BRCA1-219ENST00000491747 KCPQ6ZWJ8 1503 aa12.34□□□□□ -0.43
BRCA1-219ENST00000491747 ATP6V1AP38606 617 aa12.34□□□□□ -0.43
BRCA1-219ENST00000491747 SMIM5Q71RC9 77 aa12.34□□□□□ -0.43
BRCA1-219ENST00000491747 AMIGO3Q86WK7 504 aa12.34□□□□□ -0.43
BRCA1-219ENST00000491747 PNPLA7Q6ZV29 1317 aa12.34□□□□□ -0.43
BRCA1-219ENST00000491747 MYH14Q7Z406 1995 aaKnown RBP12.34□□□□□ -0.43
BRCA1-219ENST00000491747 PTCD1O75127 700 aaKnown RBP12.34□□□□□ -0.43
BRCA1-219ENST00000491747 CCDC146Q8IYE0 955 aa12.34□□□□□ -0.43
BRCA1-219ENST00000491747 PPP4R2Q9NY27 417 aa12.34□□□□□ -0.43
BRCA1-219ENST00000491747 CICQ96RK0 1608 aaPredicted RBP12.33□□□□□ -0.44
BRCA1-219ENST00000491747 BCL11AQ9H165 835 aa12.33□□□□□ -0.44
BRCA1-219ENST00000491747 TFCP2L1Q9NZI6 479 aa12.33□□□□□ -0.44
BRCA1-219ENST00000491747 IRX6P78412 446 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-219ENST00000491747 NFE2L2Q16236 605 aa12.32□□□□□ -0.44
BRCA1-219ENST00000491747 MSH5O43196 834 aa12.32□□□□□ -0.44
BRCA1-219ENST00000491747 ZBTB7AO95365 584 aa12.32□□□□□ -0.44
BRCA1-219ENST00000491747 TEFQ10587 303 aa12.32□□□□□ -0.44
BRCA1-219ENST00000491747 WDR43Q15061 677 aaKnown RBP eCLIP12.32□□□□□ -0.44
BRCA1-219ENST00000491747 PNNQ9H307 717 aaKnown RBP12.32□□□□□ -0.44
BRCA1-219ENST00000491747 COL24A1Q17RW2 1714 aa12.31□□□□□ -0.44
BRCA1-219ENST00000491747 MAPK8IP3Q9UPT6 1336 aa12.31□□□□□ -0.44
BRCA1-219ENST00000491747 KCNQ3O43525 872 aa12.31□□□□□ -0.44
BRCA1-219ENST00000491747 ERICH6Q7L0X2 663 aa12.31□□□□□ -0.44
BRCA1-219ENST00000491747 COL23A1Q86Y22 540 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-219ENST00000491747 ZBED9Q6R2W3 1325 aa12.31□□□□□ -0.44
BRCA1-219ENST00000491747 HTATSF1O43719 755 aaKnown RBP12.3□□□□□ -0.44
BRCA1-219ENST00000491747 NEFMP07197 916 aa12.3□□□□□ -0.44
BRCA1-219ENST00000491747 RTF1Q92541 710 aaKnown RBP12.3□□□□□ -0.44
BRCA1-219ENST00000491747 THUMPD2Q9BTF0 503 aaKnown RBP12.3□□□□□ -0.44
BRCA1-219ENST00000491747 ATF5Q9Y2D1 282 aaPredicted RBP12.3□□□□□ -0.44
BRCA1-219ENST00000491747 TMPOP42166 694 aaKnown RBP12.29□□□□□ -0.44
BRCA1-219ENST00000491747 RUNDC1Q96C34 613 aa12.29□□□□□ -0.44
BRCA1-219ENST00000491747 RRP7AQ9Y3A4 280 aaKnown RBP12.29□□□□□ -0.44
BRCA1-219ENST00000491747 KDM3BQ7LBC6 1761 aa12.29□□□□□ -0.44
BRCA1-219ENST00000491747 ZNF790Q6PG37 636 aa12.29□□□□□ -0.44
BRCA1-219ENST00000491747 DNAJC10Q8IXB1 793 aa12.29□□□□□ -0.44
BRCA1-219ENST00000491747 AK7Q96M32 723 aa12.29□□□□□ -0.44
BRCA1-219ENST00000491747 MRS2Q9HD23 443 aa12.29□□□□□ -0.44
BRCA1-219ENST00000491747 BTBD11A6QL63 1104 aa12.28□□□□□ -0.44
BRCA1-219ENST00000491747 PTGER2P43116 358 aa12.28□□□□□ -0.44
BRCA1-219ENST00000491747 RIPK4P57078 832 aa12.28□□□□□ -0.44
BRCA1-219ENST00000491747 ZNF496Q96IT1 587 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-219ENST00000491747 SPON1Q9HCB6 807 aa12.28□□□□□ -0.44
BRCA1-219ENST00000491747 PHF14O94880 888 aa12.28□□□□□ -0.44
BRCA1-219ENST00000491747 MIS18AQ9NYP9 233 aa12.28□□□□□ -0.44
BRCA1-219ENST00000491747 C4AP0C0L4 1744 aa12.27□□□□□ -0.44
BRCA1-219ENST00000491747 GNPATO15228 680 aa12.27□□□□□ -0.44
BRCA1-219ENST00000491747 NEUROD2Q15784 382 aa12.27□□□□□ -0.44
BRCA1-219ENST00000491747 FAM9BQ8IZU0 186 aa12.27□□□□□ -0.44
BRCA1-219ENST00000491747 PNISRQ8TF01 805 aaKnown RBP12.27□□□□□ -0.44
BRCA1-219ENST00000491747 SGIP1Q9BQI5 828 aa12.27□□□□□ -0.44
BRCA1-219ENST00000491747 MTFR1LQ9H019 292 aa12.27□□□□□ -0.44
BRCA1-219ENST00000491747 CNTNAP4Q9C0A0 1308 aa12.27□□□□□ -0.45
BRCA1-219ENST00000491747 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms