RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 DIAPH1O60610 1272 aaKnown RBP15.51■□□□□ 0.07
SRGAP3-210ENST00000491467 U2AF1L5P0DN76 240 aaPredicted RBP15.51■□□□□ 0.07
SRGAP3-210ENST00000491467 U2AF1Q01081 240 aaKnown RBP eCLIP15.51■□□□□ 0.07
SRGAP3-210ENST00000491467 B4GALNT3Q6L9W6 998 aa15.51■□□□□ 0.07
SRGAP3-210ENST00000491467 CTCFP49711 727 aaPredicted RBP15.5■□□□□ 0.07
SRGAP3-210ENST00000491467 CDCA7Q9BWT1 371 aaPredicted RBP15.5■□□□□ 0.07
SRGAP3-210ENST00000491467 RRAGCQ9HB90 399 aa15.5■□□□□ 0.07
SRGAP3-210ENST00000491467 PIK3C2AO00443 1686 aa15.5■□□□□ 0.07
SRGAP3-210ENST00000491467 CICQ96RK0 1608 aaPredicted RBP15.5■□□□□ 0.07
SRGAP3-210ENST00000491467 CPDO75976 1380 aa15.49■□□□□ 0.07
SRGAP3-210ENST00000491467 FCHSD2O94868 740 aa15.49■□□□□ 0.07
SRGAP3-210ENST00000491467 AIDAQ96BJ3 306 aa15.49■□□□□ 0.07
SRGAP3-210ENST00000491467 CT47B1P0C2W7 299 aaPredicted RBP15.48■□□□□ 0.07
SRGAP3-210ENST00000491467 COG3Q96JB2 828 aa15.48■□□□□ 0.07
SRGAP3-210ENST00000491467 IL16Q14005 1332 aa15.47■□□□□ 0.07
SRGAP3-210ENST00000491467 NEFMP07197 916 aa15.47■□□□□ 0.07
SRGAP3-210ENST00000491467 USP6P35125 1406 aa15.47■□□□□ 0.07
SRGAP3-210ENST00000491467 SLC27A3Q5K4L6 730 aa15.47■□□□□ 0.07
SRGAP3-210ENST00000491467 CFAP44Q96MT7 982 aa15.47■□□□□ 0.07
SRGAP3-210ENST00000491467 PLEKHF1Q96S99 279 aa15.47■□□□□ 0.07
SRGAP3-210ENST00000491467 TNRC6CQ9HCJ0 1690 aaKnown RBP15.47■□□□□ 0.07
SRGAP3-210ENST00000491467 KDM2BQ8NHM5 1336 aa15.46■□□□□ 0.07
SRGAP3-210ENST00000491467 LBX1P52954 281 aa15.46■□□□□ 0.07
SRGAP3-210ENST00000491467 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.46■□□□□ 0.07
SRGAP3-210ENST00000491467 EXOC6Q8TAG9 804 aa15.46■□□□□ 0.07
SRGAP3-210ENST00000491467 MYH16Q9H6N6 1097 aa15.46■□□□□ 0.07
SRGAP3-210ENST00000491467 POLKQ9UBT6 870 aa15.46■□□□□ 0.07
SRGAP3-210ENST00000491467 PRR36Q9H6K5 1346 aa15.45■□□□□ 0.06
SRGAP3-210ENST00000491467 MAPK8IP3Q9UPT6 1336 aa15.45■□□□□ 0.06
SRGAP3-210ENST00000491467 KCPQ6ZWJ8 1503 aa15.45■□□□□ 0.06
SRGAP3-210ENST00000491467 KCNQ4P56696 695 aa15.45■□□□□ 0.06
SRGAP3-210ENST00000491467 AAMPQ13685 434 aa15.45■□□□□ 0.06
SRGAP3-210ENST00000491467 COL23A1Q86Y22 540 aaPredicted RBP15.45■□□□□ 0.06
SRGAP3-210ENST00000491467 MKRN1Q9UHC7 482 aaKnown RBP15.45■□□□□ 0.06
SRGAP3-210ENST00000491467 PKD1L3Q7Z443 1732 aa15.45■□□□□ 0.06
SRGAP3-210ENST00000491467 TTC21AQ8NDW8 1320 aa15.44■□□□□ 0.06
SRGAP3-210ENST00000491467 PDE4DIPQ5VU43 2346 aa15.44■□□□□ 0.06
SRGAP3-210ENST00000491467 ARHGAP27Q6ZUM4 889 aa15.44■□□□□ 0.06
SRGAP3-210ENST00000491467 USP54Q70EL1 1684 aa15.44■□□□□ 0.06
SRGAP3-210ENST00000491467 U2SURPO15042 1029 aaKnown RBP15.43■□□□□ 0.06
SRGAP3-210ENST00000491467 TMPOP42166 694 aaKnown RBP15.43■□□□□ 0.06
SRGAP3-210ENST00000491467 PDE3AQ14432 1141 aa15.43■□□□□ 0.06
SRGAP3-210ENST00000491467 ABTB2Q8N961 1025 aa15.43■□□□□ 0.06
SRGAP3-210ENST00000491467 RGPD5Q99666 1765 aa15.42■□□□□ 0.06
SRGAP3-210ENST00000491467 SPINK5Q9NQ38 1064 aaPredicted RBP15.42■□□□□ 0.06
SRGAP3-210ENST00000491467 DLG5Q8TDM6 1919 aa15.42■□□□□ 0.06
SRGAP3-210ENST00000491467 ACEP12821 1306 aa15.42■□□□□ 0.06
SRGAP3-210ENST00000491467 TTC21BQ7Z4L5 1316 aa15.42■□□□□ 0.06
SRGAP3-210ENST00000491467 GCP02774 474 aa15.41■□□□□ 0.06
SRGAP3-210ENST00000491467 RBM19Q9Y4C8 960 aaKnown RBP15.41■□□□□ 0.06
SRGAP3-210ENST00000491467 C10orf71Q711Q0 1435 aa15.41■□□□□ 0.06
SRGAP3-210ENST00000491467 PLEKHG2Q9H7P9 1386 aa15.4■□□□□ 0.06
SRGAP3-210ENST00000491467 CALD1Q05682 793 aaKnown RBP15.4■□□□□ 0.06
SRGAP3-210ENST00000491467 NME9Q86XW9 330 aa15.4■□□□□ 0.06
SRGAP3-210ENST00000491467 CRBNQ96SW2 442 aa15.4■□□□□ 0.06
SRGAP3-210ENST00000491467 USP31Q70CQ4 1352 aa15.39■□□□□ 0.05
SRGAP3-210ENST00000491467 NEUROD2Q15784 382 aa15.39■□□□□ 0.05
SRGAP3-210ENST00000491467 C9orf131Q5VYM1 1079 aa15.39■□□□□ 0.05
SRGAP3-210ENST00000491467 WDR17Q8IZU2 1322 aa15.39■□□□□ 0.05
SRGAP3-210ENST00000491467 N4BP2Q86UW6 1770 aaPredicted RBP15.39■□□□□ 0.05
SRGAP3-210ENST00000491467 PLIN1O60240 522 aa15.38■□□□□ 0.05
SRGAP3-210ENST00000491467 MS4A1P11836 297 aa15.38■□□□□ 0.05
SRGAP3-210ENST00000491467 IL13P35225 146 aa15.38■□□□□ 0.05
SRGAP3-210ENST00000491467 BCS1LQ9Y276 419 aa15.38■□□□□ 0.05
SRGAP3-210ENST00000491467 PXDNLA1KZ92 1463 aa15.38■□□□□ 0.05
SRGAP3-210ENST00000491467 TCERG1O14776 1098 aaKnown RBP15.37■□□□□ 0.05
SRGAP3-210ENST00000491467 RSPH6AQ9H0K4 717 aa15.37■□□□□ 0.05
SRGAP3-210ENST00000491467 RRP7AQ9Y3A4 280 aaKnown RBP15.37■□□□□ 0.05
SRGAP3-210ENST00000491467 LY75O60449 1722 aa15.37■□□□□ 0.05
SRGAP3-210ENST00000491467 CSB-PGBD3P0DP91 1061 aa15.36■□□□□ 0.05
SRGAP3-210ENST00000491467 RIPK4P57078 832 aa15.36■□□□□ 0.05
SRGAP3-210ENST00000491467 LMOD3Q0VAK6 560 aa15.36■□□□□ 0.05
SRGAP3-210ENST00000491467 TRIM35Q9UPQ4 493 aa15.36■□□□□ 0.05
SRGAP3-210ENST00000491467 COL18A1P39060 1754 aa15.36■□□□□ 0.05
SRGAP3-210ENST00000491467 RARSP54136 660 aaKnown RBP15.35■□□□□ 0.05
SRGAP3-210ENST00000491467 ZNF428Q96B54 188 aa15.35■□□□□ 0.05
SRGAP3-210ENST00000491467 KIF24Q5T7B8 1368 aa15.35■□□□□ 0.05
SRGAP3-210ENST00000491467 NFE2L2Q16236 605 aa15.34■□□□□ 0.05
SRGAP3-210ENST00000491467 CENPQQ7L2Z9 268 aaPredicted RBP15.34■□□□□ 0.05
SRGAP3-210ENST00000491467 CARD10Q9BWT7 1032 aa15.34■□□□□ 0.05
SRGAP3-210ENST00000491467 VIRMAQ69YN4 1812 aaKnown RBP15.33■□□□□ 0.05
SRGAP3-210ENST00000491467 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.04
SRGAP3-210ENST00000491467 EMILIN1Q9Y6C2 1016 aa15.33■□□□□ 0.04
SRGAP3-210ENST00000491467 BCAR3O75815 825 aa15.32■□□□□ 0.04
SRGAP3-210ENST00000491467 PRKAR2BP31323 418 aa15.32■□□□□ 0.04
SRGAP3-210ENST00000491467 CREBZFQ9NS37 354 aa15.32■□□□□ 0.04
SRGAP3-210ENST00000491467 FANCIQ9NVI1 1328 aa15.32■□□□□ 0.04
SRGAP3-210ENST00000491467 HSPA8P11142 646 aaKnown RBP15.31■□□□□ 0.04
SRGAP3-210ENST00000491467 C20orf194Q5TEA3 1177 aa15.31■□□□□ 0.04
SRGAP3-210ENST00000491467 AXIN2Q9Y2T1 843 aa15.31■□□□□ 0.04
SRGAP3-210ENST00000491467 ABCC6O95255 1503 aa15.31■□□□□ 0.04
SRGAP3-210ENST00000491467 SBF1O95248 1867 aa15.31■□□□□ 0.04
SRGAP3-210ENST00000491467 CANXP27824 592 aaKnown RBP15.3■□□□□ 0.04
SRGAP3-210ENST00000491467 WBP1LQ9NX94 342 aa15.3■□□□□ 0.04
SRGAP3-210ENST00000491467 RNF181Q9P0P0 153 aa15.3■□□□□ 0.04
SRGAP3-210ENST00000491467 CCNL1Q9UK58 526 aaPredicted RBP15.3■□□□□ 0.04
SRGAP3-210ENST00000491467 ALDH1L2Q3SY69 923 aa15.29■□□□□ 0.04
SRGAP3-210ENST00000491467 PRPF38BQ5VTL8 546 aaKnown RBP15.29■□□□□ 0.04
SRGAP3-210ENST00000491467 VEGFAP15692 232 aaPredicted RBP15.28■□□□□ 0.04
SRGAP3-210ENST00000491467 BRPF1P55201 1214 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms