RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 HNRNPUQ00839 825 aaKnown RBP eCLIP23.92■■□□□ 1.42
PRDM2-209ENST00000491134 KDM3BQ7LBC6 1761 aa23.92■■□□□ 1.42
PRDM2-209ENST00000491134 CABP4P57796 275 aa23.91■■□□□ 1.42
PRDM2-209ENST00000491134 BCL11BQ9C0K0 894 aaPredicted RBP23.91■■□□□ 1.42
PRDM2-209ENST00000491134 ZNF853P0CG23 659 aa23.9■■□□□ 1.42
PRDM2-209ENST00000491134 WDR63Q8IWG1 891 aa23.9■■□□□ 1.42
PRDM2-209ENST00000491134 UBR2Q8IWV8 1755 aa23.89■■□□□ 1.42
PRDM2-209ENST00000491134 TEFQ10587 303 aa23.89■■□□□ 1.41
PRDM2-209ENST00000491134 TAF7Q15545 349 aaPredicted RBP23.89■■□□□ 1.41
PRDM2-209ENST00000491134 TMOD3Q9NYL9 352 aa23.89■■□□□ 1.41
PRDM2-209ENST00000491134 IL16Q14005 1332 aa23.88■■□□□ 1.41
PRDM2-209ENST00000491134 TRIM37O94972 964 aa23.88■■□□□ 1.41
PRDM2-209ENST00000491134 ZBED9Q6R2W3 1325 aa23.86■■□□□ 1.41
PRDM2-209ENST00000491134 CHL1O00533 1208 aa23.86■■□□□ 1.41
PRDM2-209ENST00000491134 SYTL4Q96C24 671 aaPredicted RBP23.86■■□□□ 1.41
PRDM2-209ENST00000491134 SPINK5Q9NQ38 1064 aaPredicted RBP23.86■■□□□ 1.41
PRDM2-209ENST00000491134 BABAM1Q9NWV8 329 aa23.86■■□□□ 1.41
PRDM2-209ENST00000491134 LY75O60449 1722 aa23.85■■□□□ 1.41
PRDM2-209ENST00000491134 CALD1Q05682 793 aaKnown RBP23.85■■□□□ 1.41
PRDM2-209ENST00000491134 CFAP44Q96MT7 982 aa23.85■■□□□ 1.41
PRDM2-209ENST00000491134 ATG3Q9NT62 314 aa23.85■■□□□ 1.41
PRDM2-209ENST00000491134 ASAP1Q9ULH1 1129 aa23.85■■□□□ 1.41
PRDM2-209ENST00000491134 IFT57Q9NWB7 429 aa23.84■■□□□ 1.41
PRDM2-209ENST00000491134 KCPQ6ZWJ8 1503 aa23.84■■□□□ 1.41
PRDM2-209ENST00000491134 MIS18AQ9NYP9 233 aa23.83■■□□□ 1.41
PRDM2-209ENST00000491134 RGPD3A6NKT7 1758 aaPredicted RBP23.83■■□□□ 1.4
PRDM2-209ENST00000491134 RGPD4Q7Z3J3 1758 aa23.83■■□□□ 1.4
PRDM2-209ENST00000491134 BTBD11A6QL63 1104 aa23.82■■□□□ 1.4
PRDM2-209ENST00000491134 KCNQ3O43525 872 aa23.82■■□□□ 1.4
PRDM2-209ENST00000491134 SLC39A6Q13433 755 aa23.82■■□□□ 1.4
PRDM2-209ENST00000491134 ZNF831Q5JPB2 1677 aa23.82■■□□□ 1.4
PRDM2-209ENST00000491134 GNAI1P63096 354 aa23.81■■□□□ 1.4
PRDM2-209ENST00000491134 ZNF790Q6PG37 636 aa23.81■■□□□ 1.4
PRDM2-209ENST00000491134 GOLGA2Q08379 1002 aa23.8■■□□□ 1.4
PRDM2-209ENST00000491134 TRMT2AQ8IZ69 625 aaKnown RBP23.8■■□□□ 1.4
PRDM2-209ENST00000491134 CICQ96RK0 1608 aaPredicted RBP23.8■■□□□ 1.4
PRDM2-209ENST00000491134 HEG1Q9ULI3 1381 aa23.79■■□□□ 1.4
PRDM2-209ENST00000491134 SLFN5Q08AF3 891 aa23.79■■□□□ 1.4
PRDM2-209ENST00000491134 CDCA7LQ96GN5 454 aa23.79■■□□□ 1.4
PRDM2-209ENST00000491134 MBIPQ9NS73 344 aa23.79■■□□□ 1.4
PRDM2-209ENST00000491134 TSPYL4Q9UJ04 414 aa23.78■■□□□ 1.4
PRDM2-209ENST00000491134 PALLDQ8WX93 1383 aa23.78■■□□□ 1.4
PRDM2-209ENST00000491134 PLSCR1O15162 318 aa23.77■■□□□ 1.4
PRDM2-209ENST00000491134 SMARCC1Q92922 1105 aaPredicted RBP23.77■■□□□ 1.4
PRDM2-209ENST00000491134 SLC4A9Q96Q91 983 aa23.77■■□□□ 1.4
PRDM2-209ENST00000491134 EIF4A1P60842 406 aaKnown RBP23.76■■□□□ 1.39
PRDM2-209ENST00000491134 CCDC125Q86Z20 511 aa23.76■■□□□ 1.39
PRDM2-209ENST00000491134 UPF1Q92900 1129 aaKnown RBP eCLIP23.76■■□□□ 1.39
PRDM2-209ENST00000491134 ZNF496Q96IT1 587 aaPredicted RBP23.76■■□□□ 1.39
PRDM2-209ENST00000491134 LAS1LQ9Y4W2 734 aaKnown RBP23.76■■□□□ 1.39
PRDM2-209ENST00000491134 TJP1Q07157 1748 aa23.76■■□□□ 1.39
PRDM2-209ENST00000491134 E9PSI1 815 aa23.75■■□□□ 1.39
PRDM2-209ENST00000491134 APBA3O96018 575 aa23.75■■□□□ 1.39
PRDM2-209ENST00000491134 TSR2Q969E8 191 aaKnown RBP23.75■■□□□ 1.39
PRDM2-209ENST00000491134 FANCIQ9NVI1 1328 aa23.75■■□□□ 1.39
PRDM2-209ENST00000491134 TAF1LQ8IZX4 1826 aa23.75■■□□□ 1.39
PRDM2-209ENST00000491134 PROM2Q8N271 834 aa23.74■■□□□ 1.39
PRDM2-209ENST00000491134 YTHDC1Q96MU7 727 aaKnown RBP23.74■■□□□ 1.39
PRDM2-209ENST00000491134 C5P01031 1676 aa23.73■■□□□ 1.39
PRDM2-209ENST00000491134 DUSP27Q5VZP5 1158 aa23.73■■□□□ 1.39
PRDM2-209ENST00000491134 TTC5Q8N0Z6 440 aa23.72■■□□□ 1.39
PRDM2-209ENST00000491134 RREB1Q92766 1687 aa23.72■■□□□ 1.39
PRDM2-209ENST00000491134 COL5A3P25940 1745 aaPredicted RBP23.72■■□□□ 1.39
PRDM2-209ENST00000491134 LOC102724428A0A0B4J2F2 783 aa23.71■■□□□ 1.39
PRDM2-209ENST00000491134 PTCD1O75127 700 aaKnown RBP23.71■■□□□ 1.39
PRDM2-209ENST00000491134 SIK1P57059 783 aa23.71■■□□□ 1.39
PRDM2-209ENST00000491134 FMNL2Q96PY5 1086 aa23.71■■□□□ 1.39
PRDM2-209ENST00000491134 CAMKK2Q96RR4 588 aa23.71■■□□□ 1.39
PRDM2-209ENST00000491134 MYH16Q9H6N6 1097 aa23.71■■□□□ 1.39
PRDM2-209ENST00000491134 KRT24Q2M2I5 525 aa23.7■■□□□ 1.38
PRDM2-209ENST00000491134 VSIG10Q8N0Z9 540 aa23.7■■□□□ 1.38
PRDM2-209ENST00000491134 LRRC4BQ9NT99 713 aa23.69■■□□□ 1.38
PRDM2-209ENST00000491134 LAMB4A4D0S4 1761 aa23.69■■□□□ 1.38
PRDM2-209ENST00000491134 GIGYF1O75420 1035 aaPredicted RBP23.68■■□□□ 1.38
PRDM2-209ENST00000491134 ITPK1Q13572 414 aa23.68■■□□□ 1.38
PRDM2-209ENST00000491134 C8orf58Q8NAV2 365 aa23.68■■□□□ 1.38
PRDM2-209ENST00000491134 RBM42Q9BTD8 480 aaKnown RBP23.68■■□□□ 1.38
PRDM2-209ENST00000491134 MYH14Q7Z406 1995 aaKnown RBP23.68■■□□□ 1.38
PRDM2-209ENST00000491134 PRAMEF22A3QJZ6 481 aa23.67■■□□□ 1.38
PRDM2-209ENST00000491134 EN1Q05925 392 aaPredicted RBP23.67■■□□□ 1.38
PRDM2-209ENST00000491134 TXNRD1Q16881 649 aa23.67■■□□□ 1.38
PRDM2-209ENST00000491134 DEFB132Q7Z7B7 95 aa23.67■■□□□ 1.38
PRDM2-209ENST00000491134 BAG6P46379 1132 aa23.66■■□□□ 1.38
PRDM2-209ENST00000491134 EXOSC9Q06265 439 aaKnown RBP23.66■■□□□ 1.38
PRDM2-209ENST00000491134 SF3B2Q13435 895 aaKnown RBP23.66■■□□□ 1.38
PRDM2-209ENST00000491134 SLC27A3Q5K4L6 730 aa23.66■■□□□ 1.38
PRDM2-209ENST00000491134 TSPYL6Q8N831 410 aa23.66■■□□□ 1.38
PRDM2-209ENST00000491134 NUP188Q5SRE5 1749 aa23.65■■□□□ 1.38
PRDM2-209ENST00000491134 SNRPA1P09661 255 aaKnown RBP23.65■■□□□ 1.38
PRDM2-209ENST00000491134 KCNQ4P56696 695 aa23.65■■□□□ 1.38
PRDM2-209ENST00000491134 HOXB7P09629 217 aa23.64■■□□□ 1.37
PRDM2-209ENST00000491134 EZH2Q15910 746 aaKnown RBP23.64■■□□□ 1.37
PRDM2-209ENST00000491134 DNAJC10Q8IXB1 793 aa23.64■■□□□ 1.37
PRDM2-209ENST00000491134 CCNL1Q9UK58 526 aaPredicted RBP23.64■■□□□ 1.37
PRDM2-209ENST00000491134 ATP6V1AP38606 617 aa23.63■■□□□ 1.37
PRDM2-209ENST00000491134 USP16Q9Y5T5 823 aa23.63■■□□□ 1.37
PRDM2-209ENST00000491134 SOS1Q07889 1333 aaPredicted RBP23.62■■□□□ 1.37
PRDM2-209ENST00000491134 LINC00116Q8NCU8 138 aa23.62■■□□□ 1.37
PRDM2-209ENST00000491134 C4BP0C0L5 1744 aa23.62■■□□□ 1.37
PRDM2-209ENST00000491134 CYP19A1P11511 503 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms