RNA–Protein interactions for RNA: ENST00000490980.1

FRAT1-202, Transcript of FRAT1, WNT signaling pathway regulator, humanhuman

TSL 2

Gene FRAT1, Length 633 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAT1-202ENST00000490980 LGR6Q9HBX8 967 aa18.73■□□□□ 0.59
FRAT1-202ENST00000490980 ATG3Q9NT62 314 aa18.73■□□□□ 0.59
FRAT1-202ENST00000490980 ASAP1Q9ULH1 1129 aa18.73■□□□□ 0.59
FRAT1-202ENST00000490980 LRP5O75197 1615 aa18.72■□□□□ 0.59
FRAT1-202ENST00000490980 CICQ96RK0 1608 aaPredicted RBP18.72■□□□□ 0.59
FRAT1-202ENST00000490980 HMGB2P26583 209 aaKnown RBP18.72■□□□□ 0.59
FRAT1-202ENST00000490980 SLC15A2Q16348 729 aa18.72■□□□□ 0.59
FRAT1-202ENST00000490980 NFATC2IPQ8NCF5 419 aa18.72■□□□□ 0.59
FRAT1-202ENST00000490980 SLC52A2Q9HAB3 445 aa18.72■□□□□ 0.59
FRAT1-202ENST00000490980 C4BP0C0L5 1744 aa18.71■□□□□ 0.59
FRAT1-202ENST00000490980 COL5A3P25940 1745 aaPredicted RBP18.71■□□□□ 0.59
FRAT1-202ENST00000490980 UBR2Q8IWV8 1755 aa18.71■□□□□ 0.59
FRAT1-202ENST00000490980 ANP32CO43423 234 aa18.71■□□□□ 0.59
FRAT1-202ENST00000490980 KCNQ4P56696 695 aa18.71■□□□□ 0.59
FRAT1-202ENST00000490980 PLEKHF1Q96S99 279 aa18.71■□□□□ 0.59
FRAT1-202ENST00000490980 LOC102724428A0A0B4J2F2 783 aa18.69■□□□□ 0.58
FRAT1-202ENST00000490980 SIK1P57059 783 aa18.69■□□□□ 0.58
FRAT1-202ENST00000490980 WDR43Q15061 677 aaKnown RBP eCLIP18.69■□□□□ 0.58
FRAT1-202ENST00000490980 AKT1S1Q96B36 256 aa18.69■□□□□ 0.58
FRAT1-202ENST00000490980 MAPK8IP3Q9UPT6 1336 aa18.69■□□□□ 0.58
FRAT1-202ENST00000490980 TJP1Q07157 1748 aa18.69■□□□□ 0.58
FRAT1-202ENST00000490980 ZNF827Q17R98 1081 aa18.68■□□□□ 0.58
FRAT1-202ENST00000490980 IL17REQ8NFR9 667 aa18.68■□□□□ 0.58
FRAT1-202ENST00000490980 CEMIPQ8WUJ3 1361 aa18.68■□□□□ 0.58
FRAT1-202ENST00000490980 UBR3Q6ZT12 1888 aa18.67■□□□□ 0.58
FRAT1-202ENST00000490980 TEFQ10587 303 aa18.67■□□□□ 0.58
FRAT1-202ENST00000490980 HTATSF1O43719 755 aaKnown RBP18.66■□□□□ 0.58
FRAT1-202ENST00000490980 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
FRAT1-202ENST00000490980 KCPQ6ZWJ8 1503 aa18.65■□□□□ 0.58
FRAT1-202ENST00000490980 ATP6V1AP38606 617 aa18.65■□□□□ 0.58
FRAT1-202ENST00000490980 NFE2L2Q16236 605 aa18.65■□□□□ 0.58
FRAT1-202ENST00000490980 RBM42Q9BTD8 480 aaKnown RBP18.65■□□□□ 0.58
FRAT1-202ENST00000490980 ITPK1Q13572 414 aa18.64■□□□□ 0.57
FRAT1-202ENST00000490980 TFCP2L1Q9NZI6 479 aa18.63■□□□□ 0.57
FRAT1-202ENST00000490980 ADAMTS8Q9UP79 889 aa18.63■□□□□ 0.57
FRAT1-202ENST00000490980 PTCD1O75127 700 aaKnown RBP18.62■□□□□ 0.57
FRAT1-202ENST00000490980 MCM10Q7L590 875 aa18.62■□□□□ 0.57
FRAT1-202ENST00000490980 SLC4A9Q96Q91 983 aa18.62■□□□□ 0.57
FRAT1-202ENST00000490980 COL24A1Q17RW2 1714 aa18.62■□□□□ 0.57
FRAT1-202ENST00000490980 KDM3BQ7LBC6 1761 aa18.61■□□□□ 0.57
FRAT1-202ENST00000490980 PNPLA7Q6ZV29 1317 aa18.61■□□□□ 0.57
FRAT1-202ENST00000490980 SLC39A6Q13433 755 aa18.61■□□□□ 0.57
FRAT1-202ENST00000490980 CCDC184Q52MB2 194 aa18.61■□□□□ 0.57
FRAT1-202ENST00000490980 LINC00116Q8NCU8 138 aa18.61■□□□□ 0.57
FRAT1-202ENST00000490980 RUNDC1Q96C34 613 aa18.61■□□□□ 0.57
FRAT1-202ENST00000490980 PDGFDQ9GZP0 370 aaPredicted RBP18.61■□□□□ 0.57
FRAT1-202ENST00000490980 DCTN1Q14203 1278 aa18.6■□□□□ 0.57
FRAT1-202ENST00000490980 CCDC146Q8IYE0 955 aa18.6■□□□□ 0.57
FRAT1-202ENST00000490980 TTC5Q8N0Z6 440 aa18.6■□□□□ 0.57
FRAT1-202ENST00000490980 AK7Q96M32 723 aa18.6■□□□□ 0.57
FRAT1-202ENST00000490980 MYH14Q7Z406 1995 aaKnown RBP18.6■□□□□ 0.57
FRAT1-202ENST00000490980 TMPOP42166 694 aaKnown RBP18.58■□□□□ 0.56
FRAT1-202ENST00000490980 ZNF790Q6PG37 636 aa18.58■□□□□ 0.56
FRAT1-202ENST00000490980 FLAD1Q8NFF5 587 aa18.58■□□□□ 0.56
FRAT1-202ENST00000490980 SPON1Q9HCB6 807 aa18.58■□□□□ 0.56
FRAT1-202ENST00000490980 MRS2Q9HD23 443 aa18.58■□□□□ 0.56
FRAT1-202ENST00000490980 CNTNAP4Q9C0A0 1308 aa18.57■□□□□ 0.56
FRAT1-202ENST00000490980 BTBD11A6QL63 1104 aa18.57■□□□□ 0.56
FRAT1-202ENST00000490980 RIPK4P57078 832 aa18.57■□□□□ 0.56
FRAT1-202ENST00000490980 SLC16A10Q8TF71 515 aa18.57■□□□□ 0.56
FRAT1-202ENST00000490980 ZBTB7AO95365 584 aa18.56■□□□□ 0.56
FRAT1-202ENST00000490980 LMOD3Q0VAK6 560 aa18.56■□□□□ 0.56
FRAT1-202ENST00000490980 RC3H1Q5TC82 1133 aaKnown RBP18.56■□□□□ 0.56
FRAT1-202ENST00000490980 VSIG10Q8N0Z9 540 aa18.56■□□□□ 0.56
FRAT1-202ENST00000490980 MTFR1LQ9H019 292 aa18.56■□□□□ 0.56
FRAT1-202ENST00000490980 C4AP0C0L4 1744 aa18.56■□□□□ 0.56
FRAT1-202ENST00000490980 GNPATO15228 680 aa18.55■□□□□ 0.56
FRAT1-202ENST00000490980 SSFA2P28290 1259 aa18.55■□□□□ 0.56
FRAT1-202ENST00000490980 TAF7Q15545 349 aaPredicted RBP18.55■□□□□ 0.56
FRAT1-202ENST00000490980 COL23A1Q86Y22 540 aaPredicted RBP18.55■□□□□ 0.56
FRAT1-202ENST00000490980 LAMB4A4D0S4 1761 aa18.55■□□□□ 0.56
FRAT1-202ENST00000490980 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
FRAT1-202ENST00000490980 MSH5O43196 834 aa18.54■□□□□ 0.56
FRAT1-202ENST00000490980 DNAJC10Q8IXB1 793 aa18.54■□□□□ 0.56
FRAT1-202ENST00000490980 PNISRQ8TF01 805 aaKnown RBP18.54■□□□□ 0.56
FRAT1-202ENST00000490980 ZNF496Q96IT1 587 aaPredicted RBP18.54■□□□□ 0.56
FRAT1-202ENST00000490980 RRP7AQ9Y3A4 280 aaKnown RBP18.54■□□□□ 0.56
FRAT1-202ENST00000490980 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.53■□□□□ 0.56
FRAT1-202ENST00000490980 FMNL2Q96PY5 1086 aa18.53■□□□□ 0.56
FRAT1-202ENST00000490980 THUMPD2Q9BTF0 503 aaKnown RBP18.53■□□□□ 0.56
FRAT1-202ENST00000490980 PHF14O94880 888 aa18.52■□□□□ 0.56
FRAT1-202ENST00000490980 CRKLP46109 303 aaKnown RBP18.52■□□□□ 0.56
FRAT1-202ENST00000490980 NEUROD2Q15784 382 aa18.52■□□□□ 0.56
FRAT1-202ENST00000490980 AMIGO3Q86WK7 504 aa18.52■□□□□ 0.56
FRAT1-202ENST00000490980 ATF5Q9Y2D1 282 aaPredicted RBP18.52■□□□□ 0.56
FRAT1-202ENST00000490980 RTCBQ9Y3I0 505 aaKnown RBP18.52■□□□□ 0.56
FRAT1-202ENST00000490980 KCNQ3O43525 872 aa18.51■□□□□ 0.55
FRAT1-202ENST00000490980 RPS6KA4O75676 772 aa18.51■□□□□ 0.55
FRAT1-202ENST00000490980 CYP19A1P11511 503 aaPredicted RBP18.51■□□□□ 0.55
FRAT1-202ENST00000490980 TEX13AQ9BXU3 409 aaPredicted RBP18.51■□□□□ 0.55
FRAT1-202ENST00000490980 ADRA2BP18089 450 aa18.5■□□□□ 0.55
FRAT1-202ENST00000490980 PTGER2P43116 358 aa18.5■□□□□ 0.55
FRAT1-202ENST00000490980 CCDC87Q9NVE4 849 aa18.5■□□□□ 0.55
FRAT1-202ENST00000490980 APAF1O14727 1248 aa18.49■□□□□ 0.55
FRAT1-202ENST00000490980 INTS5Q6P9B9 1019 aaKnown RBP18.49■□□□□ 0.55
FRAT1-202ENST00000490980 SMIM5Q71RC9 77 aa18.49■□□□□ 0.55
FRAT1-202ENST00000490980 SGIP1Q9BQI5 828 aa18.49■□□□□ 0.55
FRAT1-202ENST00000490980 TRIM35Q9UPQ4 493 aa18.49■□□□□ 0.55
FRAT1-202ENST00000490980 STARD3NLO95772 234 aa18.48■□□□□ 0.55
FRAT1-202ENST00000490980 TRAPPC3LQ5T215 181 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms