RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 LOC102724428A0A0B4J2F2 783 aa20.53■□□□□ 0.88
VPS26A-207ENST00000490696 SIK1P57059 783 aa20.53■□□□□ 0.88
VPS26A-207ENST00000490696 NFATC2IPQ8NCF5 419 aa20.53■□□□□ 0.88
VPS26A-207ENST00000490696 CASZ1Q86V15 1759 aa20.53■□□□□ 0.88
VPS26A-207ENST00000490696 MRC1P22897 1456 aa20.52■□□□□ 0.88
VPS26A-207ENST00000490696 MAP3K5Q99683 1374 aa20.52■□□□□ 0.88
VPS26A-207ENST00000490696 SLC52A2Q9HAB3 445 aa20.51■□□□□ 0.87
VPS26A-207ENST00000490696 GNAT3A8MTJ3 354 aa20.5■□□□□ 0.87
VPS26A-207ENST00000490696 C5P01031 1676 aa20.5■□□□□ 0.87
VPS26A-207ENST00000490696 VIRMAQ69YN4 1812 aaKnown RBP20.5■□□□□ 0.87
VPS26A-207ENST00000490696 TAF1LQ8IZX4 1826 aa20.5■□□□□ 0.87
VPS26A-207ENST00000490696 HMGB2P26583 209 aaKnown RBP20.49■□□□□ 0.87
VPS26A-207ENST00000490696 ITPK1Q13572 414 aa20.48■□□□□ 0.87
VPS26A-207ENST00000490696 IL17REQ8NFR9 667 aa20.48■□□□□ 0.87
VPS26A-207ENST00000490696 SLC4A9Q96Q91 983 aa20.48■□□□□ 0.87
VPS26A-207ENST00000490696 PLEKHF1Q96S99 279 aa20.48■□□□□ 0.87
VPS26A-207ENST00000490696 TFCP2L1Q9NZI6 479 aa20.48■□□□□ 0.87
VPS26A-207ENST00000490696 QSER1Q2KHR3 1735 aa20.47■□□□□ 0.87
VPS26A-207ENST00000490696 PNPLA7Q6ZV29 1317 aa20.47■□□□□ 0.87
VPS26A-207ENST00000490696 TUBGCP6Q96RT7 1819 aa20.46■□□□□ 0.87
VPS26A-207ENST00000490696 ATP6V1AP38606 617 aa20.46■□□□□ 0.87
VPS26A-207ENST00000490696 LINC00116Q8NCU8 138 aa20.46■□□□□ 0.87
VPS26A-207ENST00000490696 C4BP0C0L5 1744 aa20.46■□□□□ 0.87
VPS26A-207ENST00000490696 CEMIPQ8WUJ3 1361 aa20.46■□□□□ 0.87
VPS26A-207ENST00000490696 ZNF831Q5JPB2 1677 aa20.45■□□□□ 0.86
VPS26A-207ENST00000490696 ZBTB7AO95365 584 aa20.45■□□□□ 0.86
VPS26A-207ENST00000490696 RBM42Q9BTD8 480 aaKnown RBP20.45■□□□□ 0.86
VPS26A-207ENST00000490696 SPON1Q9HCB6 807 aa20.45■□□□□ 0.86
VPS26A-207ENST00000490696 PTCD1O75127 700 aaKnown RBP20.43■□□□□ 0.86
VPS26A-207ENST00000490696 SLC39A6Q13433 755 aa20.43■□□□□ 0.86
VPS26A-207ENST00000490696 PNNQ9H307 717 aaKnown RBP20.43■□□□□ 0.86
VPS26A-207ENST00000490696 NEFMP07197 916 aa20.42■□□□□ 0.86
VPS26A-207ENST00000490696 MTFR1LQ9H019 292 aa20.42■□□□□ 0.86
VPS26A-207ENST00000490696 HTATSF1O43719 755 aaKnown RBP20.41■□□□□ 0.86
VPS26A-207ENST00000490696 TEFQ10587 303 aa20.41■□□□□ 0.86
VPS26A-207ENST00000490696 AMIGO3Q86WK7 504 aa20.41■□□□□ 0.86
VPS26A-207ENST00000490696 COL23A1Q86Y22 540 aaPredicted RBP20.41■□□□□ 0.86
VPS26A-207ENST00000490696 AK7Q96M32 723 aa20.41■□□□□ 0.86
VPS26A-207ENST00000490696 SIPA1L3O60292 1781 aaPredicted RBP20.41■□□□□ 0.86
VPS26A-207ENST00000490696 PTGER2P43116 358 aa20.4■□□□□ 0.86
VPS26A-207ENST00000490696 KCPQ6ZWJ8 1503 aa20.4■□□□□ 0.86
VPS26A-207ENST00000490696 SLC16A10Q8TF71 515 aa20.4■□□□□ 0.86
VPS26A-207ENST00000490696 ATF5Q9Y2D1 282 aaPredicted RBP20.4■□□□□ 0.86
VPS26A-207ENST00000490696 UBR3Q6ZT12 1888 aa20.39■□□□□ 0.86
VPS26A-207ENST00000490696 CICQ96RK0 1608 aaPredicted RBP20.39■□□□□ 0.86
VPS26A-207ENST00000490696 MAPK8IP3Q9UPT6 1336 aa20.39■□□□□ 0.85
VPS26A-207ENST00000490696 NFE2L2Q16236 605 aa20.39■□□□□ 0.85
VPS26A-207ENST00000490696 MCM10Q7L590 875 aa20.39■□□□□ 0.85
VPS26A-207ENST00000490696 RTF1Q92541 710 aaKnown RBP20.39■□□□□ 0.85
VPS26A-207ENST00000490696 COL5A3P25940 1745 aaPredicted RBP20.39■□□□□ 0.85
VPS26A-207ENST00000490696 DCTN1Q14203 1278 aa20.38■□□□□ 0.85
VPS26A-207ENST00000490696 FLAD1Q8NFF5 587 aa20.38■□□□□ 0.85
VPS26A-207ENST00000490696 SGIP1Q9BQI5 828 aa20.38■□□□□ 0.85
VPS26A-207ENST00000490696 CNTNAP4Q9C0A0 1308 aa20.37■□□□□ 0.85
VPS26A-207ENST00000490696 TJP1Q07157 1748 aa20.37■□□□□ 0.85
VPS26A-207ENST00000490696 GNPATO15228 680 aa20.37■□□□□ 0.85
VPS26A-207ENST00000490696 WDR43Q15061 677 aaKnown RBP eCLIP20.37■□□□□ 0.85
VPS26A-207ENST00000490696 RC3H1Q5TC82 1133 aaKnown RBP20.37■□□□□ 0.85
VPS26A-207ENST00000490696 SMIM5Q71RC9 77 aa20.37■□□□□ 0.85
VPS26A-207ENST00000490696 ADAMTS8Q9UP79 889 aa20.37■□□□□ 0.85
VPS26A-207ENST00000490696 DLG5Q8TDM6 1919 aa20.37■□□□□ 0.85
VPS26A-207ENST00000490696 UBR2Q8IWV8 1755 aa20.36■□□□□ 0.85
VPS26A-207ENST00000490696 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.36■□□□□ 0.85
VPS26A-207ENST00000490696 SSFA2P28290 1259 aa20.36■□□□□ 0.85
VPS26A-207ENST00000490696 ZNF790Q6PG37 636 aa20.36■□□□□ 0.85
VPS26A-207ENST00000490696 ANP32CO43423 234 aa20.35■□□□□ 0.85
VPS26A-207ENST00000490696 CCDC184Q52MB2 194 aa20.35■□□□□ 0.85
VPS26A-207ENST00000490696 TTC5Q8N0Z6 440 aa20.35■□□□□ 0.85
VPS26A-207ENST00000490696 MYH14Q7Z406 1995 aaKnown RBP20.35■□□□□ 0.85
VPS26A-207ENST00000490696 COL24A1Q17RW2 1714 aa20.34■□□□□ 0.85
VPS26A-207ENST00000490696 BTBD11A6QL63 1104 aa20.34■□□□□ 0.85
VPS26A-207ENST00000490696 PHF14O94880 888 aa20.34■□□□□ 0.85
VPS26A-207ENST00000490696 DNAJC10Q8IXB1 793 aa20.34■□□□□ 0.85
VPS26A-207ENST00000490696 CCDC146Q8IYE0 955 aa20.34■□□□□ 0.85
VPS26A-207ENST00000490696 VSIG10Q8N0Z9 540 aa20.34■□□□□ 0.85
VPS26A-207ENST00000490696 ZNF496Q96IT1 587 aaPredicted RBP20.34■□□□□ 0.85
VPS26A-207ENST00000490696 KCNQ3O43525 872 aa20.33■□□□□ 0.85
VPS26A-207ENST00000490696 YY1P25490 414 aa20.33■□□□□ 0.85
VPS26A-207ENST00000490696 CRKLP46109 303 aaKnown RBP20.33■□□□□ 0.85
VPS26A-207ENST00000490696 TMPOP42166 694 aaKnown RBP20.32■□□□□ 0.84
VPS26A-207ENST00000490696 RUNDC1Q96C34 613 aa20.32■□□□□ 0.84
VPS26A-207ENST00000490696 PPP1R1BQ9UD71 204 aaPredicted RBP20.32■□□□□ 0.84
VPS26A-207ENST00000490696 RTCBQ9Y3I0 505 aaKnown RBP20.32■□□□□ 0.84
VPS26A-207ENST00000490696 RPS6KA4O75676 772 aa20.31■□□□□ 0.84
VPS26A-207ENST00000490696 CYP19A1P11511 503 aaPredicted RBP20.31■□□□□ 0.84
VPS26A-207ENST00000490696 RIPK4P57078 832 aa20.31■□□□□ 0.84
VPS26A-207ENST00000490696 INTS5Q6P9B9 1019 aaKnown RBP20.31■□□□□ 0.84
VPS26A-207ENST00000490696 THUMPD2Q9BTF0 503 aaKnown RBP20.31■□□□□ 0.84
VPS26A-207ENST00000490696 HEG1Q9ULI3 1381 aa20.31■□□□□ 0.84
VPS26A-207ENST00000490696 TAF7Q15545 349 aaPredicted RBP20.3■□□□□ 0.84
VPS26A-207ENST00000490696 FMNL2Q96PY5 1086 aa20.3■□□□□ 0.84
VPS26A-207ENST00000490696 TRAPPC3LQ5T215 181 aa20.29■□□□□ 0.84
VPS26A-207ENST00000490696 MSL1Q68DK7 614 aa20.28■□□□□ 0.84
VPS26A-207ENST00000490696 ARHGEF1Q92888 912 aaKnown RBP20.28■□□□□ 0.84
VPS26A-207ENST00000490696 ARXQ96QS3 562 aa20.28■□□□□ 0.84
VPS26A-207ENST00000490696 CCDC87Q9NVE4 849 aa20.28■□□□□ 0.84
VPS26A-207ENST00000490696 RRP7AQ9Y3A4 280 aaKnown RBP20.28■□□□□ 0.84
VPS26A-207ENST00000490696 POLD1P28340 1107 aa20.27■□□□□ 0.84
VPS26A-207ENST00000490696 LMOD3Q0VAK6 560 aa20.26■□□□□ 0.83
VPS26A-207ENST00000490696 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms