RNA–Protein interactions for RNA: ENST00000490537.6

EXOSC8-210, Transcript of exosome component 8, humanhuman

TSL 1 (best)

Gene EXOSC8, Length 2,423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-210ENST00000490537 MPRIPQ6WCQ1 1025 aa9.81□□□□□ -0.84
EXOSC8-210ENST00000490537 AIDAQ96BJ3 306 aa9.81□□□□□ -0.84
EXOSC8-210ENST00000490537 TTC21AQ8NDW8 1320 aa9.81□□□□□ -0.84
EXOSC8-210ENST00000490537 ITGB4P16144 1822 aa9.81□□□□□ -0.84
EXOSC8-210ENST00000490537 GLTPD2A6NH11 291 aa9.81□□□□□ -0.84
EXOSC8-210ENST00000490537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.81□□□□□ -0.84
EXOSC8-210ENST00000490537 NME9Q86XW9 330 aa9.8□□□□□ -0.84
EXOSC8-210ENST00000490537 CENPJQ9HC77 1338 aaPredicted RBP9.8□□□□□ -0.84
EXOSC8-210ENST00000490537 C4AP0C0L4 1744 aa9.8□□□□□ -0.84
EXOSC8-210ENST00000490537 NSD3Q9BZ95 1437 aa9.79□□□□□ -0.84
EXOSC8-210ENST00000490537 GNPATO15228 680 aa9.79□□□□□ -0.84
EXOSC8-210ENST00000490537 KDM6AO15550 1401 aaPredicted RBP9.78□□□□□ -0.84
EXOSC8-210ENST00000490537 ITPK1Q13572 414 aa9.78□□□□□ -0.84
EXOSC8-210ENST00000490537 DALRD3Q5D0E6 543 aaKnown RBP9.78□□□□□ -0.84
EXOSC8-210ENST00000490537 PIM2Q9P1W9 311 aa9.78□□□□□ -0.84
EXOSC8-210ENST00000490537 TIAM2Q8IVF5 1701 aa9.78□□□□□ -0.84
EXOSC8-210ENST00000490537 USP31Q70CQ4 1352 aa9.78□□□□□ -0.84
EXOSC8-210ENST00000490537 CHRNA5P30532 468 aa9.78□□□□□ -0.84
EXOSC8-210ENST00000490537 CFAP44Q96MT7 982 aa9.78□□□□□ -0.84
EXOSC8-210ENST00000490537 ZNF692Q9BU19 519 aaPredicted RBP9.78□□□□□ -0.84
EXOSC8-210ENST00000490537 A0A0C4DFX4 3053 aa9.78□□□□□ -0.84
EXOSC8-210ENST00000490537 KTN1Q86UP2 1357 aaKnown RBP9.78□□□□□ -0.84
EXOSC8-210ENST00000490537 MON2Q7Z3U7 1717 aa9.77□□□□□ -0.84
EXOSC8-210ENST00000490537 CCDC87Q9NVE4 849 aa9.77□□□□□ -0.85
EXOSC8-210ENST00000490537 FBLN1P23142 703 aa9.76□□□□□ -0.85
EXOSC8-210ENST00000490537 USHBP1Q8N6Y0 703 aa9.76□□□□□ -0.85
EXOSC8-210ENST00000490537 IP6K1Q92551 441 aa9.76□□□□□ -0.85
EXOSC8-210ENST00000490537 TMF1P82094 1093 aa9.76□□□□□ -0.85
EXOSC8-210ENST00000490537 LOC102724428A0A0B4J2F2 783 aa9.75□□□□□ -0.85
EXOSC8-210ENST00000490537 SIK1P57059 783 aa9.75□□□□□ -0.85
EXOSC8-210ENST00000490537 CHADLQ6NUI6 762 aa9.75□□□□□ -0.85
EXOSC8-210ENST00000490537 PIGBQ92521 554 aa9.75□□□□□ -0.85
EXOSC8-210ENST00000490537 PASKQ96RG2 1323 aa9.75□□□□□ -0.85
EXOSC8-210ENST00000490537 GYS1P13807 737 aa9.75□□□□□ -0.85
EXOSC8-210ENST00000490537 CCER1Q8TC90 406 aaPredicted RBP9.75□□□□□ -0.85
EXOSC8-210ENST00000490537 NLGN1Q8N2Q7 840 aa9.74□□□□□ -0.85
EXOSC8-210ENST00000490537 ZC3H4Q9UPT8 1303 aaKnown RBP9.74□□□□□ -0.85
EXOSC8-210ENST00000490537 CASP8AP2Q9UKL3 1982 aa9.74□□□□□ -0.85
EXOSC8-210ENST00000490537 CYP27B1O15528 508 aa9.74□□□□□ -0.85
EXOSC8-210ENST00000490537 LMNB1P20700 586 aa9.74□□□□□ -0.85
EXOSC8-210ENST00000490537 SBNO2Q9Y2G9 1366 aa9.74□□□□□ -0.85
EXOSC8-210ENST00000490537 NBPF6Q5VWK0 638 aa9.73□□□□□ -0.85
EXOSC8-210ENST00000490537 ARHGEF1Q92888 912 aaKnown RBP9.73□□□□□ -0.85
EXOSC8-210ENST00000490537 NBPF4Q96M43 638 aa9.73□□□□□ -0.85
EXOSC8-210ENST00000490537 TSKSQ9UJT2 592 aa9.73□□□□□ -0.85
EXOSC8-210ENST00000490537 PARP3Q9Y6F1 533 aa9.73□□□□□ -0.85
EXOSC8-210ENST00000490537 SMARCC1Q92922 1105 aaPredicted RBP9.73□□□□□ -0.85
EXOSC8-210ENST00000490537 STAC3Q96MF2 364 aa9.73□□□□□ -0.85
EXOSC8-210ENST00000490537 SZT2Q5T011 3432 aa9.73□□□□□ -0.85
EXOSC8-210ENST00000490537 MKI67P46013 3256 aaKnown RBP9.72□□□□□ -0.85
EXOSC8-210ENST00000490537 DDR1Q08345 913 aa9.72□□□□□ -0.85
EXOSC8-210ENST00000490537 ASAP1Q9ULH1 1129 aa9.72□□□□□ -0.85
EXOSC8-210ENST00000490537 CD163L1Q9NR16 1453 aa9.72□□□□□ -0.85
EXOSC8-210ENST00000490537 TRAPPC3LQ5T215 181 aa9.72□□□□□ -0.85
EXOSC8-210ENST00000490537 MCOLN1Q9GZU1 580 aa9.72□□□□□ -0.85
EXOSC8-210ENST00000490537 EVC2Q86UK5 1308 aa9.71□□□□□ -0.85
EXOSC8-210ENST00000490537 NFKBIEO00221 500 aa9.71□□□□□ -0.85
EXOSC8-210ENST00000490537 HOXC9P31274 260 aa9.71□□□□□ -0.85
EXOSC8-210ENST00000490537 ATP6V1AP38606 617 aa9.71□□□□□ -0.85
EXOSC8-210ENST00000490537 MYH14Q7Z406 1995 aaKnown RBP9.71□□□□□ -0.85
EXOSC8-210ENST00000490537 TMEM88BA6NKF7 163 aa9.71□□□□□ -0.86
EXOSC8-210ENST00000490537 ITGBL1O95965 494 aaPredicted RBP9.71□□□□□ -0.86
EXOSC8-210ENST00000490537 SLC4A9Q96Q91 983 aa9.71□□□□□ -0.86
EXOSC8-210ENST00000490537 MAP3K19Q56UN5 1328 aa9.7□□□□□ -0.86
EXOSC8-210ENST00000490537 HMGB2P26583 209 aaKnown RBP9.7□□□□□ -0.86
EXOSC8-210ENST00000490537 YTHDC1Q96MU7 727 aaKnown RBP9.7□□□□□ -0.86
EXOSC8-210ENST00000490537 RTCBQ9Y3I0 505 aaKnown RBP9.7□□□□□ -0.86
EXOSC8-210ENST00000490537 WDR33Q9C0J8 1336 aaKnown RBP9.69□□□□□ -0.86
EXOSC8-210ENST00000490537 SRP68Q9UHB9 627 aaKnown RBP9.69□□□□□ -0.86
EXOSC8-210ENST00000490537 PCDH11XQ9BZA7 1347 aa9.69□□□□□ -0.86
EXOSC8-210ENST00000490537 PCDH11YQ9BZA8 1340 aa9.69□□□□□ -0.86
EXOSC8-210ENST00000490537 DICER1Q9UPY3 1922 aaKnown RBP9.69□□□□□ -0.86
EXOSC8-210ENST00000490537 RASSF10A6NK89 507 aa9.68□□□□□ -0.86
EXOSC8-210ENST00000490537 DDNO94850 711 aaPredicted RBP9.68□□□□□ -0.86
EXOSC8-210ENST00000490537 MAP2K1Q02750 393 aaPredicted RBP9.68□□□□□ -0.86
EXOSC8-210ENST00000490537 FKBP8Q14318 412 aa9.68□□□□□ -0.86
EXOSC8-210ENST00000490537 DEFB115Q30KQ5 88 aa9.68□□□□□ -0.86
EXOSC8-210ENST00000490537 PRPF38BQ5VTL8 546 aaKnown RBP9.68□□□□□ -0.86
EXOSC8-210ENST00000490537 RAPGEF4Q8WZA2 1011 aa9.68□□□□□ -0.86
EXOSC8-210ENST00000490537 CUL9Q8IWT3 2517 aa9.68□□□□□ -0.86
EXOSC8-210ENST00000490537 LTBP1Q14766 1721 aa9.68□□□□□ -0.86
EXOSC8-210ENST00000490537 SOX10P56693 466 aa9.67□□□□□ -0.86
EXOSC8-210ENST00000490537 RFC4P35249 363 aa9.67□□□□□ -0.86
EXOSC8-210ENST00000490537 DPY19L2Q6NUT2 758 aa9.67□□□□□ -0.86
EXOSC8-210ENST00000490537 THSD7BQ9C0I4 1608 aa9.67□□□□□ -0.86
EXOSC8-210ENST00000490537 COL5A3P25940 1745 aaPredicted RBP9.66□□□□□ -0.86
EXOSC8-210ENST00000490537 TATP17735 454 aaPredicted RBP9.66□□□□□ -0.86
EXOSC8-210ENST00000490537 ATG3Q9NT62 314 aa9.66□□□□□ -0.86
EXOSC8-210ENST00000490537 CGNL1Q0VF96 1302 aa9.66□□□□□ -0.86
EXOSC8-210ENST00000490537 AMPHP49418 695 aa9.66□□□□□ -0.86
EXOSC8-210ENST00000490537 TSHZ2Q9NRE2 1034 aa9.66□□□□□ -0.86
EXOSC8-210ENST00000490537 DLEC1Q9Y238 1755 aa9.66□□□□□ -0.86
EXOSC8-210ENST00000490537 AFDNP55196 1824 aaKnown RBP9.66□□□□□ -0.86
EXOSC8-210ENST00000490537 KDRP35968 1356 aa9.65□□□□□ -0.86
EXOSC8-210ENST00000490537 POLRMTO00411 1230 aaKnown RBP9.65□□□□□ -0.86
EXOSC8-210ENST00000490537 FMR1Q06787 632 aaKnown RBP eCLIP9.65□□□□□ -0.86
EXOSC8-210ENST00000490537 ERFEQ4G0M1 354 aa9.65□□□□□ -0.86
EXOSC8-210ENST00000490537 LDHDQ86WU2 507 aa9.65□□□□□ -0.86
EXOSC8-210ENST00000490537 RPS6KA4O75676 772 aa9.64□□□□□ -0.87
EXOSC8-210ENST00000490537 GRM1Q13255 1194 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms