RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, humanhuman

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-208ENST00000490417 TMOD3Q9NYL9 352 aa18.3■□□□□ 0.52
SFXN4-208ENST00000490417 CCNL1Q9UK58 526 aaPredicted RBP18.3■□□□□ 0.52
SFXN4-208ENST00000490417 ANO8Q9HCE9 1232 aaPredicted RBP18.29■□□□□ 0.52
SFXN4-208ENST00000490417 PPP1R1BQ9UD71 204 aaPredicted RBP18.29■□□□□ 0.52
SFXN4-208ENST00000490417 LRP5O75197 1615 aa18.29■□□□□ 0.52
SFXN4-208ENST00000490417 DCAF5Q96JK2 942 aa18.28■□□□□ 0.52
SFXN4-208ENST00000490417 PKD1L3Q7Z443 1732 aa18.27■□□□□ 0.52
SFXN4-208ENST00000490417 DOT1LQ8TEK3 1739 aa18.27■□□□□ 0.52
SFXN4-208ENST00000490417 ZEB1P37275 1124 aaPredicted RBP18.27■□□□□ 0.52
SFXN4-208ENST00000490417 CHADLQ6NUI6 762 aa18.27■□□□□ 0.52
SFXN4-208ENST00000490417 ZNF530Q6P9A1 599 aaPredicted RBP18.27■□□□□ 0.52
SFXN4-208ENST00000490417 SHANK3Q9BYB0 1731 aa18.26■□□□□ 0.51
SFXN4-208ENST00000490417 ERVV-2B6SEH9 535 aa18.26■□□□□ 0.51
SFXN4-208ENST00000490417 TFCP2L1Q9NZI6 479 aa18.26■□□□□ 0.51
SFXN4-208ENST00000490417 NUDCQ9Y266 331 aa18.26■□□□□ 0.51
SFXN4-208ENST00000490417 KDRP35968 1356 aa18.25■□□□□ 0.51
SFXN4-208ENST00000490417 PIGBQ92521 554 aa18.24■□□□□ 0.51
SFXN4-208ENST00000490417 LRRC4BQ9NT99 713 aa18.24■□□□□ 0.51
SFXN4-208ENST00000490417 PALLDQ8WX93 1383 aa18.24■□□□□ 0.51
SFXN4-208ENST00000490417 AEBP1Q8IUX7 1158 aa18.23■□□□□ 0.51
SFXN4-208ENST00000490417 SLC16A10Q8TF71 515 aa18.23■□□□□ 0.51
SFXN4-208ENST00000490417 MTFR1LQ9H019 292 aa18.23■□□□□ 0.51
SFXN4-208ENST00000490417 U2SURPO15042 1029 aaKnown RBP18.22■□□□□ 0.51
SFXN4-208ENST00000490417 FXR2P51116 673 aaKnown RBP eCLIP18.22■□□□□ 0.51
SFXN4-208ENST00000490417 CABP4P57796 275 aa18.22■□□□□ 0.51
SFXN4-208ENST00000490417 FLAD1Q8NFF5 587 aa18.22■□□□□ 0.51
SFXN4-208ENST00000490417 AKAP4Q5JQC9 854 aa18.21■□□□□ 0.51
SFXN4-208ENST00000490417 ZBTB7AO95365 584 aa18.2■□□□□ 0.5
SFXN4-208ENST00000490417 HMOX1P09601 288 aa18.2■□□□□ 0.5
SFXN4-208ENST00000490417 PRKAR2AP13861 404 aaKnown RBP18.2■□□□□ 0.5
SFXN4-208ENST00000490417 PIP4P2Q8N4L2 257 aa18.2■□□□□ 0.5
SFXN4-208ENST00000490417 ZNF827Q17R98 1081 aa18.19■□□□□ 0.5
SFXN4-208ENST00000490417 LOC102724428A0A0B4J2F2 783 aa18.18■□□□□ 0.5
SFXN4-208ENST00000490417 POLD1P28340 1107 aa18.18■□□□□ 0.5
SFXN4-208ENST00000490417 SIK1P57059 783 aa18.18■□□□□ 0.5
SFXN4-208ENST00000490417 AK7Q96M32 723 aa18.18■□□□□ 0.5
SFXN4-208ENST00000490417 PPP2R1AP30153 589 aa18.17■□□□□ 0.5
SFXN4-208ENST00000490417 KCNQ4P56696 695 aa18.17■□□□□ 0.5
SFXN4-208ENST00000490417 GAS2L2Q8NHY3 880 aa18.17■□□□□ 0.5
SFXN4-208ENST00000490417 LY75O60449 1722 aa18.17■□□□□ 0.5
SFXN4-208ENST00000490417 NEFMP07197 916 aa18.16■□□□□ 0.5
SFXN4-208ENST00000490417 ATP6V1AP38606 617 aa18.16■□□□□ 0.5
SFXN4-208ENST00000490417 ZBTB47Q9UFB7 747 aaPredicted RBP18.16■□□□□ 0.5
SFXN4-208ENST00000490417 PAPPAQ13219 1627 aa18.16■□□□□ 0.5
SFXN4-208ENST00000490417 ASAP1Q9ULH1 1129 aa18.15■□□□□ 0.5
SFXN4-208ENST00000490417 ITGB4P16144 1822 aa18.14■□□□□ 0.5
SFXN4-208ENST00000490417 RALBP1Q15311 655 aa18.14■□□□□ 0.49
SFXN4-208ENST00000490417 ATG3Q9NT62 314 aa18.14■□□□□ 0.49
SFXN4-208ENST00000490417 PNPLA7Q6ZV29 1317 aa18.14■□□□□ 0.49
SFXN4-208ENST00000490417 CASZ1Q86V15 1759 aa18.13■□□□□ 0.49
SFXN4-208ENST00000490417 U2AF1L5P0DN76 240 aaPredicted RBP18.13■□□□□ 0.49
SFXN4-208ENST00000490417 U2AF1Q01081 240 aaKnown RBP eCLIP18.13■□□□□ 0.49
SFXN4-208ENST00000490417 NFATC2IPQ8NCF5 419 aa18.13■□□□□ 0.49
SFXN4-208ENST00000490417 PDGFDQ9GZP0 370 aaPredicted RBP18.13■□□□□ 0.49
SFXN4-208ENST00000490417 SPOCK2Q92563 424 aa18.12■□□□□ 0.49
SFXN4-208ENST00000490417 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
SFXN4-208ENST00000490417 TOGARAM1Q9Y4F4 1720 aa18.12■□□□□ 0.49
SFXN4-208ENST00000490417 FCHSD2O94868 740 aa18.11■□□□□ 0.49
SFXN4-208ENST00000490417 PTGER2P43116 358 aa18.11■□□□□ 0.49
SFXN4-208ENST00000490417 MTHFSDQ2M296 383 aaKnown RBP18.11■□□□□ 0.49
SFXN4-208ENST00000490417 ARXQ96QS3 562 aa18.11■□□□□ 0.49
SFXN4-208ENST00000490417 SLC52A2Q9HAB3 445 aa18.11■□□□□ 0.49
SFXN4-208ENST00000490417 COL3A1P02461 1466 aaPredicted RBP18.1■□□□□ 0.49
SFXN4-208ENST00000490417 KDM6AO15550 1401 aaPredicted RBP18.1■□□□□ 0.49
SFXN4-208ENST00000490417 GNAT3A8MTJ3 354 aa18.1■□□□□ 0.49
SFXN4-208ENST00000490417 RNMTO43148 476 aaKnown RBP18.1■□□□□ 0.49
SFXN4-208ENST00000490417 SSFA2P28290 1259 aa18.1■□□□□ 0.49
SFXN4-208ENST00000490417 MNX1P50219 401 aaPredicted RBP18.09■□□□□ 0.49
SFXN4-208ENST00000490417 DDX10Q13206 875 aaKnown RBP18.09■□□□□ 0.49
SFXN4-208ENST00000490417 QSER1Q2KHR3 1735 aa18.09■□□□□ 0.49
SFXN4-208ENST00000490417 PRKAR2BP31323 418 aa18.08■□□□□ 0.48
SFXN4-208ENST00000490417 TEFQ10587 303 aa18.08■□□□□ 0.48
SFXN4-208ENST00000490417 COL23A1Q86Y22 540 aaPredicted RBP18.08■□□□□ 0.48
SFXN4-208ENST00000490417 RTF1Q92541 710 aaKnown RBP18.08■□□□□ 0.48
SFXN4-208ENST00000490417 C5P01031 1676 aa18.08■□□□□ 0.48
SFXN4-208ENST00000490417 GNPATO15228 680 aa18.07■□□□□ 0.48
SFXN4-208ENST00000490417 RC3H1Q5TC82 1133 aaKnown RBP18.07■□□□□ 0.48
SFXN4-208ENST00000490417 TTC5Q8N0Z6 440 aa18.07■□□□□ 0.48
SFXN4-208ENST00000490417 RTCBQ9Y3I0 505 aaKnown RBP18.07■□□□□ 0.48
SFXN4-208ENST00000490417 MAP3K5Q99683 1374 aa18.06■□□□□ 0.48
SFXN4-208ENST00000490417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.06■□□□□ 0.48
SFXN4-208ENST00000490417 PTCD1O75127 700 aaKnown RBP18.06■□□□□ 0.48
SFXN4-208ENST00000490417 PHF14O94880 888 aa18.06■□□□□ 0.48
SFXN4-208ENST00000490417 TRAPPC3LQ5T215 181 aa18.06■□□□□ 0.48
SFXN4-208ENST00000490417 LINC00116Q8NCU8 138 aa18.06■□□□□ 0.48
SFXN4-208ENST00000490417 SGIP1Q9BQI5 828 aa18.06■□□□□ 0.48
SFXN4-208ENST00000490417 RSPH6AQ9H0K4 717 aa18.06■□□□□ 0.48
SFXN4-208ENST00000490417 LGR6Q9HBX8 967 aa18.06■□□□□ 0.48
SFXN4-208ENST00000490417 RTN4Q9NQC3 1192 aaKnown RBP18.06■□□□□ 0.48
SFXN4-208ENST00000490417 C4BP0C0L5 1744 aa18.04■□□□□ 0.48
SFXN4-208ENST00000490417 ITPK1Q13572 414 aa18.04■□□□□ 0.48
SFXN4-208ENST00000490417 FHDC1Q9C0D6 1143 aaPredicted RBP18.04■□□□□ 0.48
SFXN4-208ENST00000490417 CNTNAP4Q9C0A0 1308 aa18.03■□□□□ 0.48
SFXN4-208ENST00000490417 SYT17Q9BSW7 474 aa18.03■□□□□ 0.48
SFXN4-208ENST00000490417 FARP1Q9Y4F1 1045 aaPredicted RBP18.03■□□□□ 0.48
SFXN4-208ENST00000490417 TAF1LQ8IZX4 1826 aa18.02■□□□□ 0.48
SFXN4-208ENST00000490417 HTATSF1O43719 755 aaKnown RBP18.02■□□□□ 0.48
SFXN4-208ENST00000490417 VSIG10Q8N0Z9 540 aa18.02■□□□□ 0.48
SFXN4-208ENST00000490417 SCN11AQ9UI33 1791 aa18.02■□□□□ 0.47
SFXN4-208ENST00000490417 RFC4P35249 363 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms