RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 MRC1P22897 1456 aa12.18□□□□□ -0.46
ECM1-205ENST00000490346 PAPPAQ13219 1627 aa12.18□□□□□ -0.46
ECM1-205ENST00000490346 R3HDM1Q15032 1099 aaKnown RBP12.17□□□□□ -0.46
ECM1-205ENST00000490346 CCDC146Q8IYE0 955 aa12.17□□□□□ -0.46
ECM1-205ENST00000490346 IL17REQ8NFR9 667 aa12.17□□□□□ -0.46
ECM1-205ENST00000490346 DLG5Q8TDM6 1919 aa12.16□□□□□ -0.46
ECM1-205ENST00000490346 MRS2Q9HD23 443 aa12.16□□□□□ -0.46
ECM1-205ENST00000490346 LOC102724428A0A0B4J2F2 783 aa12.15□□□□□ -0.46
ECM1-205ENST00000490346 SIK1P57059 783 aa12.15□□□□□ -0.46
ECM1-205ENST00000490346 DCTN1Q14203 1278 aa12.15□□□□□ -0.46
ECM1-205ENST00000490346 NFE2L2Q16236 605 aa12.15□□□□□ -0.46
ECM1-205ENST00000490346 MCM10Q7L590 875 aa12.15□□□□□ -0.46
ECM1-205ENST00000490346 RTF1Q92541 710 aaKnown RBP12.15□□□□□ -0.46
ECM1-205ENST00000490346 STK32BQ9NY57 414 aa12.15□□□□□ -0.46
ECM1-205ENST00000490346 CEMIPQ8WUJ3 1361 aa12.15□□□□□ -0.46
ECM1-205ENST00000490346 C5P01031 1676 aa12.14□□□□□ -0.47
ECM1-205ENST00000490346 TEFQ10587 303 aa12.14□□□□□ -0.47
ECM1-205ENST00000490346 SLC39A6Q13433 755 aa12.14□□□□□ -0.47
ECM1-205ENST00000490346 SLC15A2Q16348 729 aa12.14□□□□□ -0.47
ECM1-205ENST00000490346 ZNF827Q17R98 1081 aa12.14□□□□□ -0.47
ECM1-205ENST00000490346 RUNDC1Q96C34 613 aa12.14□□□□□ -0.47
ECM1-205ENST00000490346 RBM42Q9BTD8 480 aaKnown RBP12.14□□□□□ -0.47
ECM1-205ENST00000490346 SIPA1L3O60292 1781 aaPredicted RBP12.14□□□□□ -0.47
ECM1-205ENST00000490346 TAF1LQ8IZX4 1826 aa12.14□□□□□ -0.47
ECM1-205ENST00000490346 HTATSF1O43719 755 aaKnown RBP12.13□□□□□ -0.47
ECM1-205ENST00000490346 PTCD1O75127 700 aaKnown RBP12.13□□□□□ -0.47
ECM1-205ENST00000490346 ATP6V1AP38606 617 aa12.13□□□□□ -0.47
ECM1-205ENST00000490346 TMPOP42166 694 aaKnown RBP12.13□□□□□ -0.47
ECM1-205ENST00000490346 SLC4A9Q96Q91 983 aa12.13□□□□□ -0.47
ECM1-205ENST00000490346 RRP7AQ9Y3A4 280 aaKnown RBP12.13□□□□□ -0.47
ECM1-205ENST00000490346 RIPK4P57078 832 aa12.12□□□□□ -0.47
ECM1-205ENST00000490346 ITPK1Q13572 414 aa12.12□□□□□ -0.47
ECM1-205ENST00000490346 NEUROD2Q15784 382 aa12.12□□□□□ -0.47
ECM1-205ENST00000490346 PNISRQ8TF01 805 aaKnown RBP12.12□□□□□ -0.47
ECM1-205ENST00000490346 AKT1S1Q96B36 256 aa12.12□□□□□ -0.47
ECM1-205ENST00000490346 C4BP0C0L5 1744 aa12.11□□□□□ -0.47
ECM1-205ENST00000490346 LINC00116Q8NCU8 138 aa12.11□□□□□ -0.47
ECM1-205ENST00000490346 THUMPD2Q9BTF0 503 aaKnown RBP12.11□□□□□ -0.47
ECM1-205ENST00000490346 PDGFDQ9GZP0 370 aaPredicted RBP12.11□□□□□ -0.47
ECM1-205ENST00000490346 TUBGCP6Q96RT7 1819 aa12.11□□□□□ -0.47
ECM1-205ENST00000490346 KCPQ6ZWJ8 1503 aa12.11□□□□□ -0.47
ECM1-205ENST00000490346 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
ECM1-205ENST00000490346 BTBD11A6QL63 1104 aa12.1□□□□□ -0.47
ECM1-205ENST00000490346 DIEXFQ68CQ4 756 aaKnown RBP12.1□□□□□ -0.47
ECM1-205ENST00000490346 TTC5Q8N0Z6 440 aa12.1□□□□□ -0.47
ECM1-205ENST00000490346 TFCP2L1Q9NZI6 479 aa12.1□□□□□ -0.47
ECM1-205ENST00000490346 CASZ1Q86V15 1759 aa12.1□□□□□ -0.47
ECM1-205ENST00000490346 UBR2Q8IWV8 1755 aa12.1□□□□□ -0.47
ECM1-205ENST00000490346 TJP1Q07157 1748 aa12.09□□□□□ -0.47
ECM1-205ENST00000490346 APAF1O14727 1248 aa12.09□□□□□ -0.47
ECM1-205ENST00000490346 ZNF790Q6PG37 636 aa12.09□□□□□ -0.47
ECM1-205ENST00000490346 COL5A3P25940 1745 aaPredicted RBP12.08□□□□□ -0.47
ECM1-205ENST00000490346 QSER1Q2KHR3 1735 aa12.08□□□□□ -0.47
ECM1-205ENST00000490346 KCNQ3O43525 872 aa12.08□□□□□ -0.48
ECM1-205ENST00000490346 HMGB2P26583 209 aaKnown RBP12.08□□□□□ -0.48
ECM1-205ENST00000490346 LMOD3Q0VAK6 560 aa12.08□□□□□ -0.48
ECM1-205ENST00000490346 ZNF496Q96IT1 587 aaPredicted RBP12.08□□□□□ -0.48
ECM1-205ENST00000490346 AK7Q96M32 723 aa12.08□□□□□ -0.48
ECM1-205ENST00000490346 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
ECM1-205ENST00000490346 PNPLA7Q6ZV29 1317 aa12.08□□□□□ -0.48
ECM1-205ENST00000490346 CICQ96RK0 1608 aaPredicted RBP12.08□□□□□ -0.48
ECM1-205ENST00000490346 SENP3-EIF4A1A0A087X0R7 540 aa12.07□□□□□ -0.48
ECM1-205ENST00000490346 TAF7Q15545 349 aaPredicted RBP12.07□□□□□ -0.48
ECM1-205ENST00000490346 SMIM5Q71RC9 77 aa12.07□□□□□ -0.48
ECM1-205ENST00000490346 AMIGO3Q86WK7 504 aa12.07□□□□□ -0.48
ECM1-205ENST00000490346 DNAJC10Q8IXB1 793 aa12.07□□□□□ -0.48
ECM1-205ENST00000490346 TRIM35Q9UPQ4 493 aa12.07□□□□□ -0.48
ECM1-205ENST00000490346 UBR3Q6ZT12 1888 aa12.06□□□□□ -0.48
ECM1-205ENST00000490346 GNPATO15228 680 aa12.06□□□□□ -0.48
ECM1-205ENST00000490346 ZBTB7AO95365 584 aa12.06□□□□□ -0.48
ECM1-205ENST00000490346 FAM9BQ8IZU0 186 aa12.06□□□□□ -0.48
ECM1-205ENST00000490346 FMNL2Q96PY5 1086 aa12.06□□□□□ -0.48
ECM1-205ENST00000490346 CNTNAP4Q9C0A0 1308 aa12.06□□□□□ -0.48
ECM1-205ENST00000490346 HEG1Q9ULI3 1381 aa12.05□□□□□ -0.48
ECM1-205ENST00000490346 KDM3BQ7LBC6 1761 aa12.05□□□□□ -0.48
ECM1-205ENST00000490346 MSH5O43196 834 aa12.05□□□□□ -0.48
ECM1-205ENST00000490346 PHF14O94880 888 aa12.05□□□□□ -0.48
ECM1-205ENST00000490346 CRKLP46109 303 aaKnown RBP12.05□□□□□ -0.48
ECM1-205ENST00000490346 COL23A1Q86Y22 540 aaPredicted RBP12.05□□□□□ -0.48
ECM1-205ENST00000490346 VSIG10Q8N0Z9 540 aa12.05□□□□□ -0.48
ECM1-205ENST00000490346 MYH14Q7Z406 1995 aaKnown RBP12.05□□□□□ -0.48
ECM1-205ENST00000490346 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.04□□□□□ -0.48
ECM1-205ENST00000490346 RC3H1Q5TC82 1133 aaKnown RBP12.04□□□□□ -0.48
ECM1-205ENST00000490346 SRCAPQ6ZRS2 3230 aa12.03□□□□□ -0.48
ECM1-205ENST00000490346 CCER2I3L3R5 266 aa12.03□□□□□ -0.48
ECM1-205ENST00000490346 CYP19A1P11511 503 aaPredicted RBP12.03□□□□□ -0.48
ECM1-205ENST00000490346 SSFA2P28290 1259 aa12.03□□□□□ -0.48
ECM1-205ENST00000490346 SPON1Q9HCB6 807 aa12.03□□□□□ -0.48
ECM1-205ENST00000490346 TSPYL4Q9UJ04 414 aa12.03□□□□□ -0.48
ECM1-205ENST00000490346 ATF5Q9Y2D1 282 aaPredicted RBP12.03□□□□□ -0.48
ECM1-205ENST00000490346 RTCBQ9Y3I0 505 aaKnown RBP12.03□□□□□ -0.48
ECM1-205ENST00000490346 LRP5O75197 1615 aa12.03□□□□□ -0.48
ECM1-205ENST00000490346 PRAMEF22A3QJZ6 481 aa12.02□□□□□ -0.49
ECM1-205ENST00000490346 RPS6KA4O75676 772 aa12.02□□□□□ -0.49
ECM1-205ENST00000490346 STARD3NLO95772 234 aa12.02□□□□□ -0.49
ECM1-205ENST00000490346 INTS5Q6P9B9 1019 aaKnown RBP12.02□□□□□ -0.49
ECM1-205ENST00000490346 MIER1Q8N108 512 aa12.02□□□□□ -0.49
ECM1-205ENST00000490346 FLAD1Q8NFF5 587 aa12.02□□□□□ -0.49
ECM1-205ENST00000490346 MTFR1LQ9H019 292 aa12.02□□□□□ -0.49
ECM1-205ENST00000490346 CCDC87Q9NVE4 849 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms