RNA–Protein interactions for RNA: ENST00000490345.1

GFRA1-205, Transcript of GDNF family receptor alpha 1, humanhuman

TSL 3

Gene GFRA1, Length 355 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-205ENST00000490345 MRC1P22897 1456 aa21.65■■□□□ 1.06
GFRA1-205ENST00000490345 PNPLA7Q6ZV29 1317 aa21.65■■□□□ 1.06
GFRA1-205ENST00000490345 PRKAR2BP31323 418 aa21.65■■□□□ 1.06
GFRA1-205ENST00000490345 ZNF831Q5JPB2 1677 aa21.64■■□□□ 1.05
GFRA1-205ENST00000490345 GAS2L2Q8NHY3 880 aa21.64■■□□□ 1.05
GFRA1-205ENST00000490345 MTFR1LQ9H019 292 aa21.64■■□□□ 1.05
GFRA1-205ENST00000490345 ATF5Q9Y2D1 282 aaPredicted RBP21.64■■□□□ 1.05
GFRA1-205ENST00000490345 MAP3K5Q99683 1374 aa21.63■■□□□ 1.05
GFRA1-205ENST00000490345 UBR3Q6ZT12 1888 aa21.63■■□□□ 1.05
GFRA1-205ENST00000490345 RNMTO43148 476 aaKnown RBP21.63■■□□□ 1.05
GFRA1-205ENST00000490345 NFATC2IPQ8NCF5 419 aa21.63■■□□□ 1.05
GFRA1-205ENST00000490345 LGR6Q9HBX8 967 aa21.63■■□□□ 1.05
GFRA1-205ENST00000490345 PPP1R1BQ9UD71 204 aaPredicted RBP21.63■■□□□ 1.05
GFRA1-205ENST00000490345 ATP6V1AP38606 617 aa21.62■■□□□ 1.05
GFRA1-205ENST00000490345 AK7Q96M32 723 aa21.62■■□□□ 1.05
GFRA1-205ENST00000490345 RBM42Q9BTD8 480 aaKnown RBP21.62■■□□□ 1.05
GFRA1-205ENST00000490345 SLC52A2Q9HAB3 445 aa21.62■■□□□ 1.05
GFRA1-205ENST00000490345 FCHSD2O94868 740 aa21.6■■□□□ 1.05
GFRA1-205ENST00000490345 ITPK1Q13572 414 aa21.6■■□□□ 1.05
GFRA1-205ENST00000490345 LINC00116Q8NCU8 138 aa21.6■■□□□ 1.05
GFRA1-205ENST00000490345 PHACTR3Q96KR7 559 aa21.6■■□□□ 1.05
GFRA1-205ENST00000490345 COL5A3P25940 1745 aaPredicted RBP21.6■■□□□ 1.05
GFRA1-205ENST00000490345 GNAT3A8MTJ3 354 aa21.59■■□□□ 1.05
GFRA1-205ENST00000490345 SLC16A10Q8TF71 515 aa21.59■■□□□ 1.05
GFRA1-205ENST00000490345 MYBBP1AQ9BQG0 1328 aaKnown RBP21.58■■□□□ 1.05
GFRA1-205ENST00000490345 MSH5O43196 834 aa21.58■■□□□ 1.05
GFRA1-205ENST00000490345 PTGER2P43116 358 aa21.58■■□□□ 1.05
GFRA1-205ENST00000490345 PTCD1O75127 700 aaKnown RBP21.57■■□□□ 1.04
GFRA1-205ENST00000490345 COL23A1Q86Y22 540 aaPredicted RBP21.57■■□□□ 1.04
GFRA1-205ENST00000490345 SLC4A9Q96Q91 983 aa21.57■■□□□ 1.04
GFRA1-205ENST00000490345 COL24A1Q17RW2 1714 aa21.57■■□□□ 1.04
GFRA1-205ENST00000490345 SIPA1L3O60292 1781 aaPredicted RBP21.56■■□□□ 1.04
GFRA1-205ENST00000490345 TJP1Q07157 1748 aa21.56■■□□□ 1.04
GFRA1-205ENST00000490345 FLAD1Q8NFF5 587 aa21.56■■□□□ 1.04
GFRA1-205ENST00000490345 CICQ96RK0 1608 aaPredicted RBP21.55■■□□□ 1.04
GFRA1-205ENST00000490345 SGIP1Q9BQI5 828 aa21.55■■□□□ 1.04
GFRA1-205ENST00000490345 MYH14Q7Z406 1995 aaKnown RBP21.54■■□□□ 1.04
GFRA1-205ENST00000490345 PHF14O94880 888 aa21.54■■□□□ 1.04
GFRA1-205ENST00000490345 UBR2Q8IWV8 1755 aa21.53■■□□□ 1.04
GFRA1-205ENST00000490345 DLG5Q8TDM6 1919 aa21.53■■□□□ 1.04
GFRA1-205ENST00000490345 GNPATO15228 680 aa21.53■■□□□ 1.04
GFRA1-205ENST00000490345 NEFMP07197 916 aa21.53■■□□□ 1.04
GFRA1-205ENST00000490345 TEFQ10587 303 aa21.53■■□□□ 1.04
GFRA1-205ENST00000490345 SLC39A6Q13433 755 aa21.53■■□□□ 1.04
GFRA1-205ENST00000490345 AMIGO3Q86WK7 504 aa21.53■■□□□ 1.04
GFRA1-205ENST00000490345 IL17REQ8NFR9 667 aa21.53■■□□□ 1.04
GFRA1-205ENST00000490345 KCPQ6ZWJ8 1503 aa21.52■■□□□ 1.04
GFRA1-205ENST00000490345 SSFA2P28290 1259 aa21.52■■□□□ 1.04
GFRA1-205ENST00000490345 CEMIPQ8WUJ3 1361 aa21.51■■□□□ 1.03
GFRA1-205ENST00000490345 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.51■■□□□ 1.03
GFRA1-205ENST00000490345 ZNF316A6NFI3 1004 aaPredicted RBP21.51■■□□□ 1.03
GFRA1-205ENST00000490345 POLD1P28340 1107 aa21.51■■□□□ 1.03
GFRA1-205ENST00000490345 PRKRIP1Q9H875 184 aaPredicted RBP21.51■■□□□ 1.03
GFRA1-205ENST00000490345 CNTNAP4Q9C0A0 1308 aa21.51■■□□□ 1.03
GFRA1-205ENST00000490345 SMIM5Q71RC9 77 aa21.5■■□□□ 1.03
GFRA1-205ENST00000490345 RTF1Q92541 710 aaKnown RBP21.5■■□□□ 1.03
GFRA1-205ENST00000490345 ARXQ96QS3 562 aa21.5■■□□□ 1.03
GFRA1-205ENST00000490345 MSL1Q68DK7 614 aa21.49■■□□□ 1.03
GFRA1-205ENST00000490345 PNNQ9H307 717 aaKnown RBP21.49■■□□□ 1.03
GFRA1-205ENST00000490345 RC3H1Q5TC82 1133 aaKnown RBP21.48■■□□□ 1.03
GFRA1-205ENST00000490345 TTC5Q8N0Z6 440 aa21.48■■□□□ 1.03
GFRA1-205ENST00000490345 PLEKHF1Q96S99 279 aa21.48■■□□□ 1.03
GFRA1-205ENST00000490345 MAPK8IP3Q9UPT6 1336 aa21.48■■□□□ 1.03
GFRA1-205ENST00000490345 MCM10Q7L590 875 aa21.47■■□□□ 1.03
GFRA1-205ENST00000490345 RTCBQ9Y3I0 505 aaKnown RBP21.47■■□□□ 1.03
GFRA1-205ENST00000490345 CRKLP46109 303 aaKnown RBP21.46■■□□□ 1.03
GFRA1-205ENST00000490345 DNAJC10Q8IXB1 793 aa21.46■■□□□ 1.03
GFRA1-205ENST00000490345 FHDC1Q9C0D6 1143 aaPredicted RBP21.46■■□□□ 1.03
GFRA1-205ENST00000490345 C4AP0C0L4 1744 aa21.46■■□□□ 1.03
GFRA1-205ENST00000490345 HTATSF1O43719 755 aaKnown RBP21.45■■□□□ 1.02
GFRA1-205ENST00000490345 RPS6KA4O75676 772 aa21.44■■□□□ 1.02
GFRA1-205ENST00000490345 ADRA2BP18089 450 aa21.44■■□□□ 1.02
GFRA1-205ENST00000490345 ZNF790Q6PG37 636 aa21.44■■□□□ 1.02
GFRA1-205ENST00000490345 BTBD11A6QL63 1104 aa21.43■■□□□ 1.02
GFRA1-205ENST00000490345 DCTN1Q14203 1278 aa21.43■■□□□ 1.02
GFRA1-205ENST00000490345 WDR43Q15061 677 aaKnown RBP eCLIP21.43■■□□□ 1.02
GFRA1-205ENST00000490345 NFE2L2Q16236 605 aa21.43■■□□□ 1.02
GFRA1-205ENST00000490345 TRAPPC3LQ5T215 181 aa21.43■■□□□ 1.02
GFRA1-205ENST00000490345 VSIG10Q8N0Z9 540 aa21.43■■□□□ 1.02
GFRA1-205ENST00000490345 KLHL34Q8N239 644 aa21.42■■□□□ 1.02
GFRA1-205ENST00000490345 SYT17Q9BSW7 474 aa21.42■■□□□ 1.02
GFRA1-205ENST00000490345 ZNF496Q96IT1 587 aaPredicted RBP21.41■■□□□ 1.02
GFRA1-205ENST00000490345 CCDC87Q9NVE4 849 aa21.41■■□□□ 1.02
GFRA1-205ENST00000490345 HEG1Q9ULI3 1381 aa21.4■■□□□ 1.02
GFRA1-205ENST00000490345 CYP19A1P11511 503 aaPredicted RBP21.4■■□□□ 1.02
GFRA1-205ENST00000490345 INTS5Q6P9B9 1019 aaKnown RBP21.4■■□□□ 1.02
GFRA1-205ENST00000490345 ARHGEF1Q92888 912 aaKnown RBP21.4■■□□□ 1.02
GFRA1-205ENST00000490345 RFC4P35249 363 aa21.39■■□□□ 1.01
GFRA1-205ENST00000490345 FMNL2Q96PY5 1086 aa21.39■■□□□ 1.01
GFRA1-205ENST00000490345 KCNQ3O43525 872 aa21.38■■□□□ 1.01
GFRA1-205ENST00000490345 CCDC146Q8IYE0 955 aa21.37■■□□□ 1.01
GFRA1-205ENST00000490345 KDM3BQ7LBC6 1761 aa21.36■■□□□ 1.01
GFRA1-205ENST00000490345 SOS1Q07889 1333 aaPredicted RBP21.36■■□□□ 1.01
GFRA1-205ENST00000490345 DCAF8L1A6NGE4 600 aa21.36■■□□□ 1.01
GFRA1-205ENST00000490345 STARD3NLO95772 234 aa21.36■■□□□ 1.01
GFRA1-205ENST00000490345 ZBTB1Q9Y2K1 713 aa21.36■■□□□ 1.01
GFRA1-205ENST00000490345 TAF7Q15545 349 aaPredicted RBP21.35■■□□□ 1.01
GFRA1-205ENST00000490345 THUMPD2Q9BTF0 503 aaKnown RBP21.35■■□□□ 1.01
GFRA1-205ENST00000490345 TEX13AQ9BXU3 409 aaPredicted RBP21.35■■□□□ 1.01
GFRA1-205ENST00000490345 ADAMTS8Q9UP79 889 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms