RNA–Protein interactions for RNA: ENST00000490299.5

RPS6KC1-204, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best)

Gene RPS6KC1, Length 5,154 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-204ENST00000490299 DDX19AQ9NUU7 478 aaKnown RBP4.36□□□□□ -1.71
RPS6KC1-204ENST00000490299 CTNNA3Q9UI47 895 aa4.36□□□□□ -1.71
RPS6KC1-204ENST00000490299 RTEL1-TNFRSF6BF6WH68 1400 aa4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 ELL2O00472 640 aaPredicted RBP4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 IVLP07476 585 aa4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 EXOSC9Q06265 439 aaKnown RBP4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 SYCP1Q15431 976 aa4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 ZNF397Q8NF99 534 aaPredicted RBP4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 CDK5RAP3Q96JB5 506 aa4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 CCDC43Q96MW1 224 aaKnown RBP4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 BCL11BQ9C0K0 894 aaPredicted RBP4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 RALGAPBQ86X10 1494 aa4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 PREX2Q70Z35 1606 aa4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 BMS1Q14692 1282 aaKnown RBP4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 LARP1BQ659C4 914 aaKnown RBP4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 EPRSP07814 1512 aaKnown RBP4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 KIAA1210Q9ULL0 1709 aa4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 HMGB1P09429 215 aaKnown RBP4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 IMMTQ16891 758 aaKnown RBP4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 KLHL40Q2TBA0 621 aa4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 PYM1Q9BRP8 204 aaKnown RBP4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 POGZQ7Z3K3 1410 aa4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 EPB41L2O43491 1005 aaKnown RBP4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 KIF5CO60282 957 aa4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 MAPK8IP2Q13387 824 aaPredicted RBP4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 CTR9Q6PD62 1173 aa4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 RIC3Q7Z5B4 369 aa4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 CRACR2AQ9BSW2 395 aa4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 REREQ9P2R6 1566 aa4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 MINK1Q8N4C8 1332 aaPredicted RBP4.35□□□□□ -1.71
RPS6KC1-204ENST00000490299 GLI2P10070 1586 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 EZRP15311 586 aaKnown RBP4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 EIF2S2P20042 333 aaKnown RBP4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 SFPQP23246 707 aaKnown RBP eCLIP4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 GBP2P32456 591 aaPredicted RBP4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 WASHC4Q2M389 1173 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 GIGYF2Q6Y7W6 1299 aaKnown RBP4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 CCDC102AQ96A19 550 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 CDCA7LQ96GN5 454 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 ME1P48163 572 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 RBM25P49756 843 aaKnown RBP4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 HSP90AB3PQ58FF7 597 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 CCDC158Q5M9N0 1113 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 VPS37DQ86XT2 251 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 TAF4BQ92750 862 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 TIGD1Q96MW7 591 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 SRRTQ9BXP5 876 aaKnown RBP4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 BIN2Q9UBW5 565 aaPredicted RBP4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 NAIPQ13075 1403 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 FCHSD2O94868 740 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 MTHFSP49914 203 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 SEPT7Q16181 437 aaKnown RBP4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 STX1AQ16623 288 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 BLOC1S2Q6QNY1 142 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 CCDC91Q7Z6B0 441 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 EHBP1Q8NDI1 1231 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 FBXW7Q969H0 707 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 NACAP1Q9BZK3 213 aa4.34□□□□□ -1.71
RPS6KC1-204ENST00000490299 SURF6O75683 361 aaKnown RBP4.34□□□□□ -1.72
RPS6KC1-204ENST00000490299 TERF1P54274 439 aa4.34□□□□□ -1.72
RPS6KC1-204ENST00000490299 TTC39AQ5SRH9 613 aa4.34□□□□□ -1.72
RPS6KC1-204ENST00000490299 ZNF692Q9BU19 519 aaPredicted RBP4.34□□□□□ -1.72
RPS6KC1-204ENST00000490299 IL16Q14005 1332 aa4.34□□□□□ -1.72
RPS6KC1-204ENST00000490299 CLASP1Q7Z460 1538 aa4.34□□□□□ -1.72
RPS6KC1-204ENST00000490299 UNC13BO14795 1591 aa4.34□□□□□ -1.72
RPS6KC1-204ENST00000490299 MYO5CQ9NQX4 1742 aa4.34□□□□□ -1.72
RPS6KC1-204ENST00000490299 SYCE3A1L190 88 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 CCDC69A6NI79 296 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 GCOM1H8Y6P7 765 aaPredicted RBP4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 MYZAPP0CAP1 466 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 PDE4CQ08493 712 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 TTLL12Q14166 644 aaPredicted RBP4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 ARHGAP29Q52LW3 1261 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 PLEKHO1Q53GL0 409 aaPredicted RBP4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 TTLL5Q6EMB2 1281 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 LUZP1Q86V48 1076 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 KRT222Q8N1A0 295 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 CLIP2Q9UDT6 1046 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 MROH1Q8NDA8 1641 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 FGFR1OPO95684 399 aaKnown RBP4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 LRSAM1Q6UWE0 723 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 SMAP1Q8IYB5 467 aaPredicted RBP4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 DDX12PQ92771 950 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 SNX21Q969T3 373 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 RPRD2Q5VT52 1461 aaKnown RBP4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 BCAR3O75815 825 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 LTV1Q96GA3 475 aaPredicted RBP4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 CCDC94Q9BW85 323 aaPredicted RBP4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 GNL3LQ9NVN8 582 aaKnown RBP4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 MAPKBP1O60336 1514 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 NPM3O75607 178 aaKnown RBP4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 KIAA1328Q86T90 577 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 TNPO1Q92973 898 aaKnown RBP4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 TBC1D32Q96NH3 1257 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 NAA15Q9BXJ9 866 aaKnown RBP4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 KDM5BQ9UGL1 1544 aa4.33□□□□□ -1.72
RPS6KC1-204ENST00000490299 PTPRCP08575 1304 aa4.32□□□□□ -1.72
RPS6KC1-204ENST00000490299 TNNT1P13805 278 aa4.32□□□□□ -1.72
RPS6KC1-204ENST00000490299 PRKAR2BP31323 418 aa4.32□□□□□ -1.72
RPS6KC1-204ENST00000490299 SPA17Q15506 151 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms