RNA–Protein interactions for RNA: ENST00000490179.2

TSC1-206, Transcript of TSC complex subunit 1, humanhuman

TSL 3

Gene TSC1, Length 681 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-206ENST00000490179 NGEFQ8N5V2 710 aa19.28■□□□□ 0.68
TSC1-206ENST00000490179 PIGBQ92521 554 aa19.28■□□□□ 0.68
TSC1-206ENST00000490179 APBA3O96018 575 aa19.27■□□□□ 0.68
TSC1-206ENST00000490179 THUMPD2Q9BTF0 503 aaKnown RBP19.27■□□□□ 0.68
TSC1-206ENST00000490179 SIPA1L3O60292 1781 aaPredicted RBP19.27■□□□□ 0.67
TSC1-206ENST00000490179 CCDC27Q2M243 656 aa19.26■□□□□ 0.67
TSC1-206ENST00000490179 UPF1Q92900 1129 aaKnown RBP eCLIP19.26■□□□□ 0.67
TSC1-206ENST00000490179 CALD1Q05682 793 aaKnown RBP19.25■□□□□ 0.67
TSC1-206ENST00000490179 TAF7Q15545 349 aaPredicted RBP19.24■□□□□ 0.67
TSC1-206ENST00000490179 BTBD11A6QL63 1104 aa19.23■□□□□ 0.67
TSC1-206ENST00000490179 BAG6P46379 1132 aa19.23■□□□□ 0.67
TSC1-206ENST00000490179 WWC1Q8IX03 1113 aa19.23■□□□□ 0.67
TSC1-206ENST00000490179 SMARCC1Q92922 1105 aaPredicted RBP19.23■□□□□ 0.67
TSC1-206ENST00000490179 ATG3Q9NT62 314 aa19.22■□□□□ 0.67
TSC1-206ENST00000490179 ASAP1Q9ULH1 1129 aa19.22■□□□□ 0.67
TSC1-206ENST00000490179 PAPPAQ13219 1627 aa19.22■□□□□ 0.67
TSC1-206ENST00000490179 HNRNPUQ00839 825 aaKnown RBP eCLIP19.21■□□□□ 0.67
TSC1-206ENST00000490179 TTC5Q8N0Z6 440 aa19.21■□□□□ 0.67
TSC1-206ENST00000490179 LAS1LQ9Y4W2 734 aaKnown RBP19.21■□□□□ 0.67
TSC1-206ENST00000490179 PALLDQ8WX93 1383 aa19.2■□□□□ 0.66
TSC1-206ENST00000490179 RGPD3A6NKT7 1758 aaPredicted RBP19.2■□□□□ 0.66
TSC1-206ENST00000490179 RGPD4Q7Z3J3 1758 aa19.2■□□□□ 0.66
TSC1-206ENST00000490179 PLSCR1O15162 318 aa19.2■□□□□ 0.66
TSC1-206ENST00000490179 SLC39A6Q13433 755 aa19.2■□□□□ 0.66
TSC1-206ENST00000490179 MIS18AQ9NYP9 233 aa19.19■□□□□ 0.66
TSC1-206ENST00000490179 LY75O60449 1722 aa19.19■□□□□ 0.66
TSC1-206ENST00000490179 EN1Q05925 392 aaPredicted RBP19.18■□□□□ 0.66
TSC1-206ENST00000490179 ZNF790Q6PG37 636 aa19.18■□□□□ 0.66
TSC1-206ENST00000490179 DEFB132Q7Z7B7 95 aa19.18■□□□□ 0.66
TSC1-206ENST00000490179 WDR63Q8IWG1 891 aa19.18■□□□□ 0.66
TSC1-206ENST00000490179 BABAM1Q9NWV8 329 aa19.18■□□□□ 0.66
TSC1-206ENST00000490179 TSPYL4Q9UJ04 414 aa19.18■□□□□ 0.66
TSC1-206ENST00000490179 KDM3BQ7LBC6 1761 aa19.18■□□□□ 0.66
TSC1-206ENST00000490179 GNAI1P63096 354 aa19.17■□□□□ 0.66
TSC1-206ENST00000490179 CFAP44Q96MT7 982 aa19.17■□□□□ 0.66
TSC1-206ENST00000490179 RBM42Q9BTD8 480 aaKnown RBP19.17■□□□□ 0.66
TSC1-206ENST00000490179 IFT57Q9NWB7 429 aa19.17■□□□□ 0.66
TSC1-206ENST00000490179 IL16Q14005 1332 aa19.17■□□□□ 0.66
TSC1-206ENST00000490179 UBR2Q8IWV8 1755 aa19.16■□□□□ 0.66
TSC1-206ENST00000490179 PTCD1O75127 700 aaKnown RBP19.16■□□□□ 0.66
TSC1-206ENST00000490179 CHL1O00533 1208 aa19.15■□□□□ 0.66
TSC1-206ENST00000490179 SOCS7O14512 581 aa19.15■□□□□ 0.66
TSC1-206ENST00000490179 EZH2Q15910 746 aaKnown RBP19.15■□□□□ 0.66
TSC1-206ENST00000490179 TXNRD1Q16881 649 aa19.15■□□□□ 0.66
TSC1-206ENST00000490179 CAMKK2Q96RR4 588 aa19.15■□□□□ 0.66
TSC1-206ENST00000490179 CCNL1Q9UK58 526 aaPredicted RBP19.15■□□□□ 0.66
TSC1-206ENST00000490179 KCPQ6ZWJ8 1503 aa19.15■□□□□ 0.66
TSC1-206ENST00000490179 LOC102724428A0A0B4J2F2 783 aa19.14■□□□□ 0.65
TSC1-206ENST00000490179 KCNQ3O43525 872 aa19.14■□□□□ 0.65
TSC1-206ENST00000490179 SIK1P57059 783 aa19.14■□□□□ 0.65
TSC1-206ENST00000490179 SLC27A3Q5K4L6 730 aa19.14■□□□□ 0.65
TSC1-206ENST00000490179 FMNL2Q96PY5 1086 aa19.14■□□□□ 0.65
TSC1-206ENST00000490179 ZNF521Q96K83 1311 aa19.14■□□□□ 0.65
TSC1-206ENST00000490179 ZNF853P0CG23 659 aa19.13■□□□□ 0.65
TSC1-206ENST00000490179 ZNF831Q5JPB2 1677 aa19.12■□□□□ 0.65
TSC1-206ENST00000490179 RREB1Q92766 1687 aa19.12■□□□□ 0.65
TSC1-206ENST00000490179 ATP6V1AP38606 617 aa19.12■□□□□ 0.65
TSC1-206ENST00000490179 GOLGA2Q08379 1002 aa19.12■□□□□ 0.65
TSC1-206ENST00000490179 ZNF496Q96IT1 587 aaPredicted RBP19.12■□□□□ 0.65
TSC1-206ENST00000490179 MBIPQ9NS73 344 aa19.12■□□□□ 0.65
TSC1-206ENST00000490179 HMGB2P26583 209 aaKnown RBP19.11■□□□□ 0.65
TSC1-206ENST00000490179 VSIG10Q8N0Z9 540 aa19.11■□□□□ 0.65
TSC1-206ENST00000490179 PROM2Q8N271 834 aa19.11■□□□□ 0.65
TSC1-206ENST00000490179 HEG1Q9ULI3 1381 aa19.1■□□□□ 0.65
TSC1-206ENST00000490179 KCNQ4P56696 695 aa19.1■□□□□ 0.65
TSC1-206ENST00000490179 EIF4A1P60842 406 aaKnown RBP19.1■□□□□ 0.65
TSC1-206ENST00000490179 MYH16Q9H6N6 1097 aa19.1■□□□□ 0.65
TSC1-206ENST00000490179 TJP1Q07157 1748 aa19.09■□□□□ 0.65
TSC1-206ENST00000490179 ZBED9Q6R2W3 1325 aa19.09■□□□□ 0.65
TSC1-206ENST00000490179 C5P01031 1676 aa19.09■□□□□ 0.65
TSC1-206ENST00000490179 TSR2Q969E8 191 aaKnown RBP19.09■□□□□ 0.65
TSC1-206ENST00000490179 SLC4A9Q96Q91 983 aa19.09■□□□□ 0.65
TSC1-206ENST00000490179 LRRC4BQ9NT99 713 aa19.09■□□□□ 0.65
TSC1-206ENST00000490179 CICQ96RK0 1608 aaPredicted RBP19.09■□□□□ 0.65
TSC1-206ENST00000490179 NUP188Q5SRE5 1749 aa19.08■□□□□ 0.65
TSC1-206ENST00000490179 E9PSI1 815 aa19.08■□□□□ 0.64
TSC1-206ENST00000490179 YTHDC1Q96MU7 727 aaKnown RBP19.08■□□□□ 0.64
TSC1-206ENST00000490179 TEX13AQ9BXU3 409 aaPredicted RBP19.08■□□□□ 0.64
TSC1-206ENST00000490179 TAF1LQ8IZX4 1826 aa19.07■□□□□ 0.64
TSC1-206ENST00000490179 FANCIQ9NVI1 1328 aa19.07■□□□□ 0.64
TSC1-206ENST00000490179 SNRPA1P09661 255 aaKnown RBP19.07■□□□□ 0.64
TSC1-206ENST00000490179 ITPK1Q13572 414 aa19.07■□□□□ 0.64
TSC1-206ENST00000490179 SPINK5Q9NQ38 1064 aaPredicted RBP19.07■□□□□ 0.64
TSC1-206ENST00000490179 COL5A3P25940 1745 aaPredicted RBP19.06■□□□□ 0.64
TSC1-206ENST00000490179 DNAJC10Q8IXB1 793 aa19.06■□□□□ 0.64
TSC1-206ENST00000490179 GIGYF1O75420 1035 aaPredicted RBP19.05■□□□□ 0.64
TSC1-206ENST00000490179 STARD3NLO95772 234 aa19.05■□□□□ 0.64
TSC1-206ENST00000490179 SLFN5Q08AF3 891 aa19.05■□□□□ 0.64
TSC1-206ENST00000490179 LINC00116Q8NCU8 138 aa19.05■□□□□ 0.64
TSC1-206ENST00000490179 CDCA7LQ96GN5 454 aa19.05■□□□□ 0.64
TSC1-206ENST00000490179 LAMB4A4D0S4 1761 aa19.04■□□□□ 0.64
TSC1-206ENST00000490179 C4BP0C0L5 1744 aa19.04■□□□□ 0.64
TSC1-206ENST00000490179 NBPF14Q5TI25 921 aa19.04■□□□□ 0.64
TSC1-206ENST00000490179 PRAMEF22A3QJZ6 481 aa19.03■□□□□ 0.64
TSC1-206ENST00000490179 KRT24Q2M2I5 525 aa19.03■□□□□ 0.64
TSC1-206ENST00000490179 CYP19A1P11511 503 aaPredicted RBP19.02■□□□□ 0.64
TSC1-206ENST00000490179 AK7Q96M32 723 aa19.02■□□□□ 0.64
TSC1-206ENST00000490179 STK32BQ9NY57 414 aa19.02■□□□□ 0.64
TSC1-206ENST00000490179 ELL2O00472 640 aaPredicted RBP19.01■□□□□ 0.63
TSC1-206ENST00000490179 HOXB7P09629 217 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms