RNA–Protein interactions for RNA: ENST00000490006.6

LINC01140-207, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 1,389 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-207ENST00000490006 PTF1AQ7RTS3 328 aa13.87□□□□□ -0.19
LINC01140-207ENST00000490006 NFATC2IPQ8NCF5 419 aa13.87□□□□□ -0.19
LINC01140-207ENST00000490006 DCAF5Q96JK2 942 aa13.87□□□□□ -0.19
LINC01140-207ENST00000490006 TNS2Q63HR2 1409 aa13.86□□□□□ -0.19
LINC01140-207ENST00000490006 TEFQ10587 303 aa13.86□□□□□ -0.19
LINC01140-207ENST00000490006 MIS18AQ9NYP9 233 aa13.86□□□□□ -0.19
LINC01140-207ENST00000490006 MAP3K5Q99683 1374 aa13.86□□□□□ -0.19
LINC01140-207ENST00000490006 PARP4Q9UKK3 1724 aaKnown RBP13.86□□□□□ -0.19
LINC01140-207ENST00000490006 NKX1-1Q15270 411 aaPredicted RBP13.85□□□□□ -0.19
LINC01140-207ENST00000490006 PIP4P2Q8N4L2 257 aa13.85□□□□□ -0.19
LINC01140-207ENST00000490006 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
LINC01140-207ENST00000490006 LMOD3Q0VAK6 560 aa13.84□□□□□ -0.19
LINC01140-207ENST00000490006 SP7Q8TDD2 431 aaPredicted RBP13.84□□□□□ -0.19
LINC01140-207ENST00000490006 TMOD3Q9NYL9 352 aa13.84□□□□□ -0.19
LINC01140-207ENST00000490006 HTATSF1O43719 755 aaKnown RBP13.83□□□□□ -0.19
LINC01140-207ENST00000490006 PIGBQ92521 554 aa13.83□□□□□ -0.19
LINC01140-207ENST00000490006 THSD7AQ9UPZ6 1657 aa13.83□□□□□ -0.19
LINC01140-207ENST00000490006 WNK3Q9BYP7 1800 aa13.83□□□□□ -0.2
LINC01140-207ENST00000490006 LRRC37A3O60309 1634 aa13.83□□□□□ -0.2
LINC01140-207ENST00000490006 ERVV-2B6SEH9 535 aa13.83□□□□□ -0.2
LINC01140-207ENST00000490006 APBA3O96018 575 aa13.83□□□□□ -0.2
LINC01140-207ENST00000490006 SLC39A6Q13433 755 aa13.83□□□□□ -0.2
LINC01140-207ENST00000490006 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
LINC01140-207ENST00000490006 SF3B2Q13435 895 aaKnown RBP13.82□□□□□ -0.2
LINC01140-207ENST00000490006 TAF7Q15545 349 aaPredicted RBP13.82□□□□□ -0.2
LINC01140-207ENST00000490006 WWC1Q8IX03 1113 aa13.82□□□□□ -0.2
LINC01140-207ENST00000490006 SLC52A2Q9HAB3 445 aa13.82□□□□□ -0.2
LINC01140-207ENST00000490006 BCL11BQ9C0K0 894 aaPredicted RBP13.81□□□□□ -0.2
LINC01140-207ENST00000490006 ASAP1Q9ULH1 1129 aa13.81□□□□□ -0.2
LINC01140-207ENST00000490006 DLG5Q8TDM6 1919 aa13.8□□□□□ -0.2
LINC01140-207ENST00000490006 PITPNM1O00562 1244 aa13.8□□□□□ -0.2
LINC01140-207ENST00000490006 PTCD1O75127 700 aaKnown RBP13.8□□□□□ -0.2
LINC01140-207ENST00000490006 PKD1L3Q7Z443 1732 aa13.8□□□□□ -0.2
LINC01140-207ENST00000490006 KDM6AO15550 1401 aaPredicted RBP13.79□□□□□ -0.2
LINC01140-207ENST00000490006 KCNQ3O43525 872 aa13.79□□□□□ -0.2
LINC01140-207ENST00000490006 TSPYL4Q9UJ04 414 aa13.79□□□□□ -0.2
LINC01140-207ENST00000490006 SHANK3Q9BYB0 1731 aa13.78□□□□□ -0.2
LINC01140-207ENST00000490006 KCNQ4P56696 695 aa13.78□□□□□ -0.2
LINC01140-207ENST00000490006 ATG3Q9NT62 314 aa13.78□□□□□ -0.2
LINC01140-207ENST00000490006 CALD1Q05682 793 aaKnown RBP13.77□□□□□ -0.21
LINC01140-207ENST00000490006 TTC5Q8N0Z6 440 aa13.77□□□□□ -0.21
LINC01140-207ENST00000490006 EN1Q05925 392 aaPredicted RBP13.76□□□□□ -0.21
LINC01140-207ENST00000490006 CCDC27Q2M243 656 aa13.76□□□□□ -0.21
LINC01140-207ENST00000490006 DEFB132Q7Z7B7 95 aa13.76□□□□□ -0.21
LINC01140-207ENST00000490006 TSR2Q969E8 191 aaKnown RBP13.76□□□□□ -0.21
LINC01140-207ENST00000490006 CDCA7LQ96GN5 454 aa13.76□□□□□ -0.21
LINC01140-207ENST00000490006 ELL2O00472 640 aaPredicted RBP13.75□□□□□ -0.21
LINC01140-207ENST00000490006 GNAI1P63096 354 aa13.75□□□□□ -0.21
LINC01140-207ENST00000490006 GOLGA2Q08379 1002 aa13.75□□□□□ -0.21
LINC01140-207ENST00000490006 WDR63Q8IWG1 891 aa13.75□□□□□ -0.21
LINC01140-207ENST00000490006 NGEFQ8N5V2 710 aa13.75□□□□□ -0.21
LINC01140-207ENST00000490006 PLEKHG2Q9H7P9 1386 aa13.75□□□□□ -0.21
LINC01140-207ENST00000490006 ZNF790Q6PG37 636 aa13.74□□□□□ -0.21
LINC01140-207ENST00000490006 UPF1Q92900 1129 aaKnown RBP eCLIP13.74□□□□□ -0.21
LINC01140-207ENST00000490006 SMARCC1Q92922 1105 aaPredicted RBP13.74□□□□□ -0.21
LINC01140-207ENST00000490006 CEMIPQ8WUJ3 1361 aa13.74□□□□□ -0.21
LINC01140-207ENST00000490006 ITGB4P16144 1822 aa13.73□□□□□ -0.21
LINC01140-207ENST00000490006 FXR2P51116 673 aaKnown RBP eCLIP13.73□□□□□ -0.21
LINC01140-207ENST00000490006 EZH2Q15910 746 aaKnown RBP13.73□□□□□ -0.21
LINC01140-207ENST00000490006 CFAP44Q96MT7 982 aa13.73□□□□□ -0.21
LINC01140-207ENST00000490006 MBIPQ9NS73 344 aa13.73□□□□□ -0.21
LINC01140-207ENST00000490006 DOT1LQ8TEK3 1739 aa13.73□□□□□ -0.21
LINC01140-207ENST00000490006 SCN11AQ9UI33 1791 aa13.73□□□□□ -0.21
LINC01140-207ENST00000490006 VIRMAQ69YN4 1812 aaKnown RBP13.73□□□□□ -0.21
LINC01140-207ENST00000490006 CHL1O00533 1208 aa13.72□□□□□ -0.21
LINC01140-207ENST00000490006 ATP6V1AP38606 617 aa13.72□□□□□ -0.21
LINC01140-207ENST00000490006 BAG6P46379 1132 aa13.72□□□□□ -0.21
LINC01140-207ENST00000490006 KRT24Q2M2I5 525 aa13.72□□□□□ -0.21
LINC01140-207ENST00000490006 NECTIN2Q92692 538 aa13.72□□□□□ -0.21
LINC01140-207ENST00000490006 ZNF496Q96IT1 587 aaPredicted RBP13.72□□□□□ -0.21
LINC01140-207ENST00000490006 IFT57Q9NWB7 429 aa13.72□□□□□ -0.21
LINC01140-207ENST00000490006 BCL9O00512 1426 aa13.72□□□□□ -0.21
LINC01140-207ENST00000490006 SBF2Q86WG5 1849 aa13.71□□□□□ -0.21
LINC01140-207ENST00000490006 CCDC125Q86Z20 511 aa13.71□□□□□ -0.21
LINC01140-207ENST00000490006 FMNL2Q96PY5 1086 aa13.71□□□□□ -0.21
LINC01140-207ENST00000490006 CCNL1Q9UK58 526 aaPredicted RBP13.71□□□□□ -0.21
LINC01140-207ENST00000490006 TOGARAM1Q9Y4F4 1720 aa13.71□□□□□ -0.22
LINC01140-207ENST00000490006 PALLDQ8WX93 1383 aa13.71□□□□□ -0.22
LINC01140-207ENST00000490006 LOC102724428A0A0B4J2F2 783 aa13.71□□□□□ -0.22
LINC01140-207ENST00000490006 EIF2S2P20042 333 aaKnown RBP13.71□□□□□ -0.22
LINC01140-207ENST00000490006 SIK1P57059 783 aa13.71□□□□□ -0.22
LINC01140-207ENST00000490006 TXNRD1Q16881 649 aa13.71□□□□□ -0.22
LINC01140-207ENST00000490006 MYH16Q9H6N6 1097 aa13.71□□□□□ -0.22
LINC01140-207ENST00000490006 PRAMEF22A3QJZ6 481 aa13.7□□□□□ -0.22
LINC01140-207ENST00000490006 HAX1O00165 279 aa13.7□□□□□ -0.22
LINC01140-207ENST00000490006 ZNF853P0CG23 659 aa13.7□□□□□ -0.22
LINC01140-207ENST00000490006 EIF4A1P60842 406 aaKnown RBP13.7□□□□□ -0.22
LINC01140-207ENST00000490006 EXOSC9Q06265 439 aaKnown RBP13.7□□□□□ -0.22
LINC01140-207ENST00000490006 SLFN5Q08AF3 891 aa13.7□□□□□ -0.22
LINC01140-207ENST00000490006 IL16Q14005 1332 aa13.69□□□□□ -0.22
LINC01140-207ENST00000490006 E9PSI1 815 aa13.69□□□□□ -0.22
LINC01140-207ENST00000490006 TCERG1O14776 1098 aaKnown RBP13.69□□□□□ -0.22
LINC01140-207ENST00000490006 PLSCR1O15162 318 aa13.69□□□□□ -0.22
LINC01140-207ENST00000490006 DNAJC10Q8IXB1 793 aa13.69□□□□□ -0.22
LINC01140-207ENST00000490006 PROM2Q8N271 834 aa13.69□□□□□ -0.22
LINC01140-207ENST00000490006 C8orf58Q8NAV2 365 aa13.69□□□□□ -0.22
LINC01140-207ENST00000490006 ARXQ96QS3 562 aa13.69□□□□□ -0.22
LINC01140-207ENST00000490006 BTAF1O14981 1849 aa13.68□□□□□ -0.22
LINC01140-207ENST00000490006 ZNF521Q96K83 1311 aa13.68□□□□□ -0.22
LINC01140-207ENST00000490006 SPDYE2BA6NHP3 402 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms