RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 MYH16Q9H6N6 1097 aa17.42■□□□□ 0.38
TRAIP-210ENST00000489948 LGR6Q9HBX8 967 aa17.42■□□□□ 0.38
TRAIP-210ENST00000489948 DUSP27Q5VZP5 1158 aa17.41■□□□□ 0.38
TRAIP-210ENST00000489948 SLC52A2Q9HAB3 445 aa17.41■□□□□ 0.38
TRAIP-210ENST00000489948 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
TRAIP-210ENST00000489948 FANCIQ9NVI1 1328 aa17.41■□□□□ 0.38
TRAIP-210ENST00000489948 CHL1O00533 1208 aa17.4■□□□□ 0.38
TRAIP-210ENST00000489948 RXRBP28702 533 aa17.4■□□□□ 0.38
TRAIP-210ENST00000489948 TEFQ10587 303 aa17.4■□□□□ 0.38
TRAIP-210ENST00000489948 CDCA7LQ96GN5 454 aa17.4■□□□□ 0.38
TRAIP-210ENST00000489948 A0A0G2JS52 829 aa17.39■□□□□ 0.37
TRAIP-210ENST00000489948 MYT1Q01538 1121 aa17.39■□□□□ 0.37
TRAIP-210ENST00000489948 TAF7Q15545 349 aaPredicted RBP17.39■□□□□ 0.37
TRAIP-210ENST00000489948 POTEAQ6S8J7 498 aa17.39■□□□□ 0.37
TRAIP-210ENST00000489948 CICQ96RK0 1608 aaPredicted RBP17.39■□□□□ 0.37
TRAIP-210ENST00000489948 MBIPQ9NS73 344 aa17.37■□□□□ 0.37
TRAIP-210ENST00000489948 CENPBP07199 599 aaPredicted RBP17.36■□□□□ 0.37
TRAIP-210ENST00000489948 TSPYL4Q9UJ04 414 aa17.36■□□□□ 0.37
TRAIP-210ENST00000489948 KCPQ6ZWJ8 1503 aa17.36■□□□□ 0.37
TRAIP-210ENST00000489948 ZNF831Q5JPB2 1677 aa17.36■□□□□ 0.37
TRAIP-210ENST00000489948 LAMB4A4D0S4 1761 aa17.35■□□□□ 0.37
TRAIP-210ENST00000489948 CT47B1P0C2W7 299 aaPredicted RBP17.35■□□□□ 0.37
TRAIP-210ENST00000489948 CABP4P57796 275 aa17.35■□□□□ 0.37
TRAIP-210ENST00000489948 KRT27Q7Z3Y8 459 aa17.35■□□□□ 0.37
TRAIP-210ENST00000489948 BTAF1O14981 1849 aa17.35■□□□□ 0.37
TRAIP-210ENST00000489948 BTBD11A6QL63 1104 aa17.34■□□□□ 0.37
TRAIP-210ENST00000489948 SOS1Q07889 1333 aaPredicted RBP17.34■□□□□ 0.37
TRAIP-210ENST00000489948 TSR2Q969E8 191 aaKnown RBP17.34■□□□□ 0.37
TRAIP-210ENST00000489948 TMOD3Q9NYL9 352 aa17.34■□□□□ 0.37
TRAIP-210ENST00000489948 HEG1Q9ULI3 1381 aa17.34■□□□□ 0.37
TRAIP-210ENST00000489948 NFATC2IPQ8NCF5 419 aa17.33■□□□□ 0.36
TRAIP-210ENST00000489948 C5P01031 1676 aa17.32■□□□□ 0.36
TRAIP-210ENST00000489948 LAS1LQ9Y4W2 734 aaKnown RBP17.32■□□□□ 0.36
TRAIP-210ENST00000489948 SRCAPQ6ZRS2 3230 aa17.32■□□□□ 0.36
TRAIP-210ENST00000489948 ZNF790Q6PG37 636 aa17.31■□□□□ 0.36
TRAIP-210ENST00000489948 KAT6BQ8WYB5 2073 aa17.31■□□□□ 0.36
TRAIP-210ENST00000489948 RGPD3A6NKT7 1758 aaPredicted RBP17.3■□□□□ 0.36
TRAIP-210ENST00000489948 RGPD4Q7Z3J3 1758 aa17.3■□□□□ 0.36
TRAIP-210ENST00000489948 HOXB7P09629 217 aa17.3■□□□□ 0.36
TRAIP-210ENST00000489948 FAM196AQ6ZSG2 479 aa17.3■□□□□ 0.36
TRAIP-210ENST00000489948 PIGBQ92521 554 aa17.3■□□□□ 0.36
TRAIP-210ENST00000489948 ZNF428Q96B54 188 aa17.3■□□□□ 0.36
TRAIP-210ENST00000489948 LY75O60449 1722 aa17.3■□□□□ 0.36
TRAIP-210ENST00000489948 TNS1Q9HBL0 1735 aaKnown RBP17.3■□□□□ 0.36
TRAIP-210ENST00000489948 PRIM1P49642 420 aaKnown RBP17.29■□□□□ 0.36
TRAIP-210ENST00000489948 EIF4A1P60842 406 aaKnown RBP17.29■□□□□ 0.36
TRAIP-210ENST00000489948 EXOSC9Q06265 439 aaKnown RBP17.29■□□□□ 0.36
TRAIP-210ENST00000489948 MIS18AQ9NYP9 233 aa17.29■□□□□ 0.36
TRAIP-210ENST00000489948 CACNA1FO60840 1977 aa17.29■□□□□ 0.36
TRAIP-210ENST00000489948 TJP1Q07157 1748 aa17.28■□□□□ 0.36
TRAIP-210ENST00000489948 TTC5Q8N0Z6 440 aa17.28■□□□□ 0.36
TRAIP-210ENST00000489948 ACSBG1Q96GR2 724 aa17.26■□□□□ 0.35
TRAIP-210ENST00000489948 FMNL2Q96PY5 1086 aa17.26■□□□□ 0.35
TRAIP-210ENST00000489948 COL5A3P25940 1745 aaPredicted RBP17.26■□□□□ 0.35
TRAIP-210ENST00000489948 KCNQ3O43525 872 aa17.25■□□□□ 0.35
TRAIP-210ENST00000489948 SLC39A6Q13433 755 aa17.25■□□□□ 0.35
TRAIP-210ENST00000489948 TWISTNBQ3B726 338 aaPredicted RBP17.25■□□□□ 0.35
TRAIP-210ENST00000489948 VSIG10Q8N0Z9 540 aa17.25■□□□□ 0.35
TRAIP-210ENST00000489948 C8orf58Q8NAV2 365 aa17.25■□□□□ 0.35
TRAIP-210ENST00000489948 SYTL4Q96C24 671 aaPredicted RBP17.25■□□□□ 0.35
TRAIP-210ENST00000489948 BCL11BQ9C0K0 894 aaPredicted RBP17.25■□□□□ 0.35
TRAIP-210ENST00000489948 ATG3Q9NT62 314 aa17.25■□□□□ 0.35
TRAIP-210ENST00000489948 RREB1Q92766 1687 aa17.24■□□□□ 0.35
TRAIP-210ENST00000489948 KCNQ2O43526 872 aa17.24■□□□□ 0.35
TRAIP-210ENST00000489948 FAM182BQ5T319 152 aa17.24■□□□□ 0.35
TRAIP-210ENST00000489948 TSPYL6Q8N831 410 aa17.24■□□□□ 0.35
TRAIP-210ENST00000489948 SMARCC1Q92922 1105 aaPredicted RBP17.24■□□□□ 0.35
TRAIP-210ENST00000489948 ZNF496Q96IT1 587 aaPredicted RBP17.24■□□□□ 0.35
TRAIP-210ENST00000489948 CHMP4AQ9BY43 222 aa17.24■□□□□ 0.35
TRAIP-210ENST00000489948 PALLDQ8WX93 1383 aa17.24■□□□□ 0.35
TRAIP-210ENST00000489948 VAMP4O75379 141 aa17.23■□□□□ 0.35
TRAIP-210ENST00000489948 GIGYF1O75420 1035 aaPredicted RBP17.23■□□□□ 0.35
TRAIP-210ENST00000489948 KRT24Q2M2I5 525 aa17.23■□□□□ 0.35
TRAIP-210ENST00000489948 ALDH1L2Q3SY69 923 aa17.23■□□□□ 0.35
TRAIP-210ENST00000489948 ASAP1Q9ULH1 1129 aa17.23■□□□□ 0.35
TRAIP-210ENST00000489948 RCAN3Q9UKA8 241 aa17.22■□□□□ 0.35
TRAIP-210ENST00000489948 SNRPA1P09661 255 aaKnown RBP17.21■□□□□ 0.35
TRAIP-210ENST00000489948 TAF1LQ8IZX4 1826 aa17.21■□□□□ 0.35
TRAIP-210ENST00000489948 RARSP54136 660 aaKnown RBP17.2■□□□□ 0.34
TRAIP-210ENST00000489948 BRPF1P55201 1214 aaPredicted RBP17.2■□□□□ 0.34
TRAIP-210ENST00000489948 ERBB4Q15303 1308 aa17.19■□□□□ 0.34
TRAIP-210ENST00000489948 RNF123Q5XPI4 1314 aa17.19■□□□□ 0.34
TRAIP-210ENST00000489948 TEX13AQ9BXU3 409 aaPredicted RBP17.18■□□□□ 0.34
TRAIP-210ENST00000489948 LOC102724428A0A0B4J2F2 783 aa17.17■□□□□ 0.34
TRAIP-210ENST00000489948 PTCD1O75127 700 aaKnown RBP17.17■□□□□ 0.34
TRAIP-210ENST00000489948 SIK1P57059 783 aa17.17■□□□□ 0.34
TRAIP-210ENST00000489948 HDGFL1Q5TGJ6 251 aa17.17■□□□□ 0.34
TRAIP-210ENST00000489948 CCDC30Q5VVM6 783 aa17.17■□□□□ 0.34
TRAIP-210ENST00000489948 PTF1AQ7RTS3 328 aa17.17■□□□□ 0.34
TRAIP-210ENST00000489948 N4BP2Q86UW6 1770 aaPredicted RBP17.17■□□□□ 0.34
TRAIP-210ENST00000489948 KIF16BQ96L93 1317 aa17.17■□□□□ 0.34
TRAIP-210ENST00000489948 ELL2O00472 640 aaPredicted RBP17.16■□□□□ 0.34
TRAIP-210ENST00000489948 SSH1Q8WYL5 1049 aa17.16■□□□□ 0.34
TRAIP-210ENST00000489948 SLC4A9Q96Q91 983 aa17.16■□□□□ 0.34
TRAIP-210ENST00000489948 TRIM37O94972 964 aa17.15■□□□□ 0.34
TRAIP-210ENST00000489948 SMC4Q9NTJ3 1288 aa17.15■□□□□ 0.34
TRAIP-210ENST00000489948 PRAMEF22A3QJZ6 481 aa17.14■□□□□ 0.33
TRAIP-210ENST00000489948 PLSCR1O15162 318 aa17.14■□□□□ 0.33
TRAIP-210ENST00000489948 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.33
TRAIP-210ENST00000489948 STK31Q9BXU1 1019 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms