RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 TRAIPQ9BWF2 469 aa5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 CTNNA3Q9UI47 895 aa5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 DDX41Q9UJV9 622 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 HDAC5Q9UQL6 1122 aa5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 ZNF330Q9Y3S2 320 aaPredicted RBP5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 FHOD3Q2V2M9 1422 aa5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 EPRSP07814 1512 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 POM121CA8CG34 1229 aa5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 TRIM6-TRIM34B2RNG4 842 aa5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 PADI6Q6TGC4 694 aa5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 PANK1Q8TE04 598 aa5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 TRIM34Q9BYJ4 488 aa5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 SPDYE5A6NIY4 337 aa5.79□□□□□ -1.48
SNRNP40-206ENST00000489853 CC2D1BQ5T0F9 858 aaKnown RBP5.79□□□□□ -1.48
SNRNP40-206ENST00000489853 MCTP1Q6DN14 999 aa5.79□□□□□ -1.48
SNRNP40-206ENST00000489853 MTMR14Q8NCE2 650 aa5.79□□□□□ -1.48
SNRNP40-206ENST00000489853 ZNF622Q969S3 477 aaKnown RBP eCLIP5.79□□□□□ -1.48
SNRNP40-206ENST00000489853 ZNF428Q96B54 188 aa5.79□□□□□ -1.48
SNRNP40-206ENST00000489853 SUPT6HQ7KZ85 1726 aaKnown RBP5.79□□□□□ -1.48
SNRNP40-206ENST00000489853 CAMSAP2Q08AD1 1489 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 ABCC10Q5T3U5 1492 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 TPM3P06753 285 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 CERS3Q8IU89 383 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 PTCD2Q8WV60 388 aaKnown RBP5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 CWC22Q9HCG8 908 aaKnown RBP5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 UGGT2Q9NYU1 1516 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 KIF16BQ96L93 1317 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 PHF14O94880 888 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 MBD3O95983 291 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 APPP05067 770 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 CYP2E1P05181 493 aaPredicted RBP5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 FAM69CQ0P6D2 419 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 CDCA8Q53HL2 280 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 CTR9Q6PD62 1173 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 ADGRD1Q6QNK2 874 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 KRT222Q8N1A0 295 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 PXYLP1Q8TE99 480 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 TSPY26PQ9H489 355 aa5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 FEZ2Q9UHY8 353 aaPredicted RBP5.78□□□□□ -1.48
SNRNP40-206ENST00000489853 PRG4Q92954 1404 aaPredicted RBP5.77□□□□□ -1.49
SNRNP40-206ENST00000489853 EHBP1L1Q8N3D4 1523 aa5.77□□□□□ -1.49
SNRNP40-206ENST00000489853 ADAMTS12P58397 1594 aa5.77□□□□□ -1.49
SNRNP40-206ENST00000489853 FAM177BA6PVY3 158 aa5.77□□□□□ -1.49
SNRNP40-206ENST00000489853 ARHGAP33O14559 1287 aa5.77□□□□□ -1.49
SNRNP40-206ENST00000489853 TNNT3P45378 269 aaPredicted RBP5.77□□□□□ -1.49
SNRNP40-206ENST00000489853 HDAC1Q13547 482 aaPredicted RBP5.77□□□□□ -1.49
SNRNP40-206ENST00000489853 FAM184AQ8NB25 1140 aa5.77□□□□□ -1.49
SNRNP40-206ENST00000489853 GAS2L2Q8NHY3 880 aa5.77□□□□□ -1.49
SNRNP40-206ENST00000489853 GPT2Q8TD30 523 aa5.77□□□□□ -1.49
SNRNP40-206ENST00000489853 KIF2CQ99661 725 aa5.77□□□□□ -1.49
SNRNP40-206ENST00000489853 ADGRG1Q9Y653 693 aa5.77□□□□□ -1.49
SNRNP40-206ENST00000489853 SYCE3A1L190 88 aa5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 CARNS1A5YM72 827 aa5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 PRPF40AO75400 957 aaKnown RBP5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 PPP2R1AP30153 589 aa5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 FOXD4L5Q5VV16 416 aaPredicted RBP5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 KIF18AQ8NI77 898 aa5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 FOXD4L4Q8WXT5 416 aaPredicted RBP5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 JPH4Q96JJ6 628 aa5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 FAM53CQ9NYF3 392 aa5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 TMEM63CQ9P1W3 806 aa5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 MTMR7Q9Y216 660 aa5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 COL17A1Q9UMD9 1497 aaPredicted RBP5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 ARHGEF12Q9NZN5 1544 aa5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 DIP2BQ9P265 1576 aa5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 ABL2P42684 1182 aa5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 PSEN2P49810 448 aa5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 NCBP1Q09161 790 aaKnown RBP5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 DMRTA1Q5VZB9 504 aa5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 KIAA1524Q8TCG1 905 aa5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 SYAP1Q96A49 352 aaPredicted RBP5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 RBM27Q9P2N5 1060 aaKnown RBP5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 TBC1D2BQ9UPU7 963 aa5.76□□□□□ -1.49
SNRNP40-206ENST00000489853 ADCY10Q96PN6 1610 aa5.75□□□□□ -1.49
SNRNP40-206ENST00000489853 NOP2P46087 812 aaKnown RBP5.75□□□□□ -1.49
SNRNP40-206ENST00000489853 RARSP54136 660 aaKnown RBP5.75□□□□□ -1.49
SNRNP40-206ENST00000489853 QPCTQ16769 361 aa5.75□□□□□ -1.49
SNRNP40-206ENST00000489853 EPAS1Q99814 870 aa5.75□□□□□ -1.49
SNRNP40-206ENST00000489853 PSDA5PKW4 1024 aaPredicted RBP5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 SMTNL1A8MU46 457 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 APAF1O14727 1248 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 REC8O95072 547 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 CD2BP2O95400 341 aaKnown RBP5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 PZPP20742 1482 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 CYP2C19P33261 490 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 HNRNPH2P55795 449 aaKnown RBP5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 TTC12Q9H892 705 aaPredicted RBP5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 SLC52A1Q9NWF4 448 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 PLXNC1O60486 1568 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 SAMD9Q5K651 1589 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 LOC102724159A0A0B4J2E5 919 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 HRO43593 1189 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 ADCY5O95622 1261 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 RLBP1P12271 317 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 GTF2A1P52655 376 aaPredicted RBP5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 PWP2Q15269 919 aaKnown RBP5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 RABEP1Q15276 862 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 RNF214Q8ND24 703 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 ZNF397Q8NF99 534 aaPredicted RBP5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 SPIRE2Q8WWL2 714 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms